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EBI DbfetchID EU627612; SV 1; linear; genomic RNA; STD; VRL; 7174 BP. XX AC EU627612; XX DT 03-MAY-2008 (Rel. 95, Created) DT 15-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Latino virus strain MARU 10924 segment L, complete sequence. XX KW . XX OS Latino virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC New world arenaviruses. XX RN [1] RP 1-7174 RX DOI; 10.1016/j.mib.2008.06.001 RX PUBMED; 18602020. RA Charrel R.N., de Lamballerie X., Emonet S.; RT "Phylogeny of the genus Arenavirus"; RL Curr. Opin. Microbiol. 11(4):362-368(2008). XX RN [2] RP 1-7174 RA Emonet S.F., de Lamballerie X.N., Charrel R.N.; RT ; RL Submitted (09-APR-2008) to the EMBL/GenBank/DDBJ databases. RL MIND, The Scripps Research Institute, 10550 North Torrey Pines Road, La RL Jolla, CA 92037, USA XX FH Key Location/Qualifiers FH FT source 1..7174 FT /organism="Latino virus" FT /segment="L" FT /strain="MARU 10924" FT /mol_type="genomic RNA" FT /country="Bolivia" FT /db_xref="taxon:45221" FT CDS 68..343 FT /codon_start=1 FT /product="Z protein" FT /db_xref="GOA:A9JR44" FT /db_xref="InterPro:IPR017907" FT /db_xref="UniProtKB/Swiss-Prot:A9JR44" FT /protein_id="ACC94299.1" FT /translation="MGSKQSAPPKPLQLPQPRVSLLREAKPSLYGRYNCKCCWFQDKNL FT VECSDHYLCLKCISSMLKRGKNCEICGKAIPTYIEVGITPTAPQLN" FT CDS complement(428..7144) FT /codon_start=1 FT /product="L protein" FT /note="polymerase" FT /db_xref="GOA:B2MW49" FT /db_xref="InterPro:IPR010453" FT /db_xref="UniProtKB/Swiss-Prot:B2MW49" FT /protein_id="ACC94300.1" FT /translation="MDDIVNQLFDLLRKHFPARPKVTEQITLVTCQNDAKMILTEGFKL FT LSLLVELDSAEANNCTHNSDSLTIEGILRKEGIMSIALPRIVPDGFSLYGNVLILLETF FT VRVNPVSFEQKYNQDMSKLLSLKDDLSLCGITLVPLVDGRTNYYNRFVDDWVIERFRWL FT LLQLIKFVRESGEEIEELEYQRLITSLSKLENQSLGFENIEKLPQTGLKYRDELKKHMF FT GNLSSKMKESEIQENLINVLKEFFIKEYKNNKSLHKFVFTNRDGLLAKLDQITHHSEHP FT VDCMSCSSKLYSIIDKLGTLKRQPLHSDYHPIYAKMWHSDSLSQAEQIYLKLLSQCNKI FT KSAKLLNTRRNTLLFLDLIMVNFIVHSWKQNPEVLTEYRRCGLMAGQLALFSNDRYFDL FT NELRNKLINKLKNCENWIAKCVHQLKKQEFVALDDVLVWATVPDFESLELITTSLELKR FT FKLQYGKDKVDHNEHPIGPLSEETFFRNLNVLSSVCLALVNSMKTSFTSKTVINERRAS FT NHFGEVDLIECYCQRFFLSKDLVGILSYQKTGEKSRCYSISLISNGELEYIGSFYCDPK FT RFFLPIFSQIVLLNMSREMMLWLADLNLNDSLVGDKLRKLILLIVTNPSKRNQTFLQGL FT RYFIMAYVNQFHHVELMDRLIVPVKSYCESCLQRISFDIFRLILEGDYDNEHMTRKFKF FT LLNVSYLCHLITKETPDRLTDQIKCFEKFMEPKLKFESVIVNPSLTENMTEDEEAQVLK FT GVDKLLGKSLSCSTDLTSPGVSKTLLSMCVSSFNRGLLNVNGHLRQDPYRPNFTSTALD FT LSSNKSVVVPKLDELGNPISRYDYELLVSSCVTNLAEGFKTKGKFKLDINCQEYTIMRN FT LTNLVLKNEDKSDAKIKGEKPCSFELSQWMETLSEEQLEVLEKLKGDVNIALGKLKEKG FT RSKSNSTLKEGVKRLDSGNTLAGCADPQQVLVNLWSEFGVMKQILVEVSLHEIKDFDPD FT IIPPQMIQKLVFKVNNSNYKSLFFLDSVINPCPLELLIKNMTTATFDDGELFECFKYLL FT ITAGFDQKLGTYEHKNRSRFGFKFEALKVREEGRMSSRESNSEAIARRLDKSVFTNSAL FT RNLCFYSDESPISYSHVSPDVGKLKFGLSYKEQVGSNRELYVGDLNTKLMTRLIEDFSE FT SVVSNMSYSCLNNEAEFEKAITDMKMCVNLGDMSLSLDHSKWGPHMSPVIFAAFLQGLD FT LKYGPSLCKLNTDPIITLLSWHIHKVVEVPYNVIHAYVTGMIKRQLGLMNMSGSTITES FT FVHRLLKEKREPLSHVMSVIDMGQGILHNMSDLYGLVTEQFINYAIHFLFDMNTTSYTS FT SDDQISMIKIGSGMCNFESLKVIEEWETILNFHAFISTKFNKFVSPKTVAGTFAAEFKS FT RFFVWGEEVPLLTKFVSAALHNVKCKTPVQLSETVDTICDQCVANGVSVEIVSYICNRT FT NRLIRYSGFGEHPFLNVENLDVKDWVDGSRGYRLQRNIELHLESDGCTSFIRQAARKVF FT SNIKSGKIVEQALVDLVQEDGDKAITGFLRSVGVSEEDIALLCRIRWINLCAHGDLRLV FT LRTKLMSSRRIIETEEIPSLIKSIQSKLSKNFVKGAKKILAESINKSAFQSSIASGFIG FT FCQSVGSKCVRTGEGGFYYIKELKSKVDLYCPCEVCARWKGVTYCSSSCLKIESFTRPL FT MWDYFSLVLSNACELGEWVFEDVEYPKDINFLRNPNLFWLVKPRVSCQIEEKLGLTHIL FT QSIRRNYPQLFETHLSPFMSDFQAGRTLGTMTVKFLDVCVALDLANENLGIVKHFLKNR FT RHDIYIVKQDESSQSHIRCQKSICVDVELTSTQVCQNFMTQLIMSSLVQPLVLTSSELK FT KFNWFQQVLTLETDEDVDLGLLTDFALQVKKFNVDRAMHSEDLSAGYISSTVSVTTFSL FT SKPIFLQQIDSDFIGGTEDRKDFIQMIKSEFTKNSIDLQFVIQISHVKRALRFNLKRTT FT VYTLIVRTSILKEVILNSLGQEDQSVELVVDDLELFCSGHDGNHFTLDAAPLIVQEPLI FT NGNLKFDLVSRLEEEDLTFSYSESLPSFHFNFEKYKHELCNKFSYHLSGPVIVDEPLVL FT DRGVILHGGRKLTTLQFDFSADRIMQALSELESLSSRDLFLFNLWVYSDQTKSKLYIHQ FT DKLLLLVESYLSELNSSLARYDSWLNLGNYMICYSKSFKCLMISDTNGRNRLKGILCRR FT LIEEEVQDIE" XX SQ Sequence 7174 BP; 2191 A; 1570 C; 1163 G; 2250 T; 0 other; cgcaccgagg atcctaggca caaacagctc acgcctcctg tgatcctctt gcagagcacc 60 atcaatcatg ggctccaagc aaagtgctcc ccccaaaccg ctccagctcc cacaaccaag 120 agtgtccctg ctcagggagg cgaagccctc actgtacgga agatacaatt gcaaatgttg 180 ttggtttcag gacaagaatc ttgttgaatg tagcgatcac tacctctgcc tgaagtgcat 240 cagttcaatg ctaaaaagag gcaagaactg tgaaatctgt ggcaaagcaa ttccaaccta 300 cattgaagtc ggcataactc caacagcacc gcaactcaac tgagccaaag gctcccccgg 360 cgagggcccc cagtgggggc cctcgccccg ggggggcccc ccccgggatc gggggagtgg 420 tcctgcatta ctcaatgtcc tgcacctcct cttcaatcaa cctcctacac agaatacctt 480 tgagcctatt cctaccattg gtgtcagaga tcattaaaca cttgaaagat ttactatagc 540 atatcatata atttcctaga ttaagccagc tatcatatct tgctaatgat gaattgagtt 600 cagacaaata gctttccact agtagcaaaa gcttgtcttg atgtatgtat aacttgctct 660 tggtttgatc tgaataaacc cacaaattaa aaagaaacaa atctctggat gaaagagatt 720 ctaattcaga taatgcttgc attattctat ctgccgaaaa atcgaattga agggttgtta 780 acttcctacc gccatgtaga atcactcctc tatcaagaac caaaggctca tcaacaatta 840 ctggtccact caagtgataa gaaaacttat tacaaagttc atgtttatat ttttcaaaat 900 tgaaatgaaa ggatggcaag gactctgagt aagaaaaagt caaatcttct tcctcaagtc 960 ttgacactaa gtcaaatttt aggtttccat ttatcaaggg ctcttggaca attaaaggtg 1020 cagcatcaag ggtaaagtgg tttccatcat gcccactaca aaaaagttct aaatcatcaa 1080 caaccaattc aacactttga tcttcttgcc ccagggaatt gaggataacc tctttcaaaa 1140 tggatgttct cactatcaga gtgtatacag ttgttctctt gaggttgaat ctcaatgctc 1200 tcttgacatg tgagatttgt attacaaact gtaagtcaat actatttttt gtaaattccg 1260 atttaatcat ctgtatgaaa tctttacggt cctcagtccc accaatgaaa tctgaatcaa 1320 tctgttgcaa aaatatgggt tttgataatg aaaatgttgt cacactaact gtggaactaa 1380 tataacctgc actaaggtcc tcagaatgca ttgctctatc aacattaaac ttttttacct 1440 gtagggcaaa gtcagtgagc aaccctaagt caacatcctc atcagtctct aaggttaaga 1500 cttgttgaaa ccaattgaat ttcttcaact ctgaactggt caagactaga ggttggacca 1560 aagaactcat tattaattgt gtcataaagt tttgacaaac ttgggtggat gtcaattcaa 1620 catccacaca aatgctcttc tgacacctta tgtgtgattg tgagctctca tcctgcttta 1680 caatgtagat atcatgcctc ctattcttta agaagtgttt cacaatacct aagttctcat 1740 tggccaagtc caaagctaca caaacatcaa ggaatttgac tgtcatggtg ccaagggttc 1800 taccagcttg aaaatcactc ataaagggtg ataggtgagt ctcaaagagt tgtgggtaat 1860 ttcttctgat tgattgaaga atatgagtta gaccaagctt ttcctcaatc tgacatgaga 1920 cccttggttt aacaagccaa aaaagattag gatttcttag gaaattaata tcttttgggt 1980 actcaacatc ttcaaaaacc cattcaccaa gttcacaagc attggacaat accaaagaga 2040 agtagtccca cattaatggc cttgtgaaac tctctatctt aaggcacgaa ctggagcagt 2100 atgtgacccc tttccacctt gcgcacactt cacagggaca gtacaagtca acttttgact 2160 tcagttcttt tatataataa aatccccctt ctcctgttct cacacactta ctcccaacac 2220 tttggcagaa gcctatgaag cctgaggcta tggaagactg aaaggctgac ttgtttattg 2280 actctgcgag aatctttttt gcacctttta caaagttctt agataattta gattgtatag 2340 acttgatcaa actaggaatt tcttctgttt caattatcct ccttgaactc attaactttg 2400 ttctaaggac taacctcaaa tcaccatgag cacacaggtt gatccatctt attctacaga 2460 gtagggcaat atcctcttct gaaacaccaa cacttcttaa aaatccagta attgccttat 2520 caccatcctc ttgcacaaga tcaaccagag cttgctcaac tatttttcct gattttatgt 2580 tggagaagac tttcctagct gcttgtctaa taaagctagt gcatccatca ctctcaagat 2640 gtaattcaat attcctttga agtctataac ctctgctacc atccacccaa tctttaacat 2700 caaggttttc tacattgagg aatgggtgtt ctccaaaccc actataccta atcagtctgt 2760 tagtcctgtt acatatgtat gacacaatct caacagagac accattcgct acacattgat 2820 cacaaatcgt atccactgtt tcagataact gaacgggagt tttgcacttg acattgtgca 2880 acgcagcaga aacaaacttt gtaagtaagg gaacttcttc accccaaaca aaaaatcttg 2940 atttgaattc tgctgcaaat gtcccagcaa ctgtttttgg actgacaaat ttgttaaatt 3000 tagtagagat gaatgcatga aaatttaaaa tagtttccca ttcttcaatt actttcaatg 3060 attcaaagtt gcacattccg ctacctattt ttatcatgga gatttgatca tcactagagg 3120 tatatgatgt tgtgttcatg tcaaagagga aatgaattgc ataattaata aactgttcag 3180 taaccaaccc atacaagtca gacatattat gaagaatccc ctggcccatg tcaatcactg 3240 acatcacgtg actcagaggt tctctcttct ccttaagaag tctatgtaca aatgattcag 3300 taatagttga tccactcatg ttcatcagcc ccagttgtct cttgatcatt cccgtaacat 3360 atgcatgaat cacattatat ggcacctcca caactttgtg gatgtgccaa gagagtagtg 3420 ttataattgg atcggtgttc aatttacata aggatggacc atacttaaga tccaatccct 3480 gcagaaatgc tgcaaatata acaggagaca tatgaggtcc ccactttgag tgatccagtg 3540 acaaactcat atcccctaaa ttcacacaca tcttcatgtc agttatagcc ttttcaaatt 3600 cagcttcatt atttaagcaa gaataactca tgttggaaac cacggattct gaaaaatcct 3660 caattaaccg agtcatcagt tttgtattca aatcacccac ataaagttct ctatttgatc 3720 caacctgctc tttgtagctc aaaccaaatt taagtttccc cacatcaggt gaaacatgac 3780 tataagaaat cggtgattca tcagaataaa aacaaagatt tcttaaggct gagtttgtaa 3840 acactgactt gtccaacctt cttgcaatag cttctgagtt actttctcta gaactcatcc 3900 taccttcctc ccgaacttta agtgcctcaa acttgaagcc aaatcttgat ctatttttat 3960 gttcatacgt acccaatttt tggtcaaatc cagctgttat gagtaaatat ttgaaacatt 4020 caaacaactc accatcatca aaagtggctg ttgtcatgtt tttgattagt agctctagag 4080 gacatgggtt tataacacta tccaaaaaga acaaagattt gtaattagaa ttattcactt 4140 tgaaaaccaa tttctgaatc atctggggtg gtattatgtc tggatcaaaa tcctttattt 4200 catgcaaaga gacttctacc aaaatctgct tcataacacc aaattcactc cataagttca 4260 ctaaaacctg ttgtggatct gcacatcctg ctagagtatt tccactatct aacctcttca 4320 ctccctcttt taaagtacta tttgatttag atctcccctt ttccttcagc tttcctaatg 4380 ctatgttaac atctccttta agtttctcca aaacctcaag ttgctcttct gacaaggtct 4440 ccatccactg tgatagttca aaactgcaag gcttttctcc cttgattttt gcatcacttt 4500 tatcttcatt tttcaagacc agattggtca aatttctcat tatggtgtat tcttggcaat 4560 tgatgtccag cttgaacttg ccttttgttt tgaatccttc agcaaggttt gtaacacaag 4620 aggaaacaag taactcatag tcgtatctgg aaataggatt cccaagttca tcaagcttcg 4680 gcacaacaac acttttattg cttgacaagt ctagagcagt actggtgaag ttgggtctat 4740 aagggtcttg tctcaggtga ccattcacat ttaacagccc tctattaaag ctggacacac 4800 acatgcttaa cagagtcttc gacacaccag gacttgttaa atctgtggaa caactcaaac 4860 tcttacccaa aagtttgtct actcctttta gcacttgggc ctcctcatcc tccgtcatgt 4920 tctcagtcaa acttggattg acaatgactg attcaaattt taacttaggt tccatgaatt 4980 tctcaaaaca tttaatctga tctgtaagtc tgtctggtgt ttcttttgtt attagatgac 5040 atagataact aacattgagt aaaaacttaa attttctagt catgtgctcg ttatcataat 5100 ccccttctaa aatcaaccta aagatgtcaa aagaaatacg ttgcagacaa ctttcacaat 5160 agcttttcac tggtactatt aatctatcca tcaattctac atggtgaaac tgattcacat 5220 aagccattat gaaataccta agaccttgca ggaaggtctg atttctctta ctgggatttg 5280 ttacgatgag caatatcaac tttcttagtt tatcccctac caaactgtca ttgaggttca 5340 ggtcagctaa ccagagcatc atctctcttg acatgtttaa caaaacaatc tgagaaaaaa 5400 taggcaagaa aaacctttta ggatcacaat aaaaggaccc tatatactct aattctccat 5460 tggaaattaa actaatgcta taacatcttg acttctcccc agttttttgg taagaaagaa 5520 tcccaactaa gtctttagat agaaaaaatc tttggcaata acattctatg agatcaactt 5580 ctccaaagtg attagaagct ctcctttcat ttatcacagt ctttgaggta aatgaggttt 5640 tcattgaatt caccaaggct aagcacacag aagataagac attaagattc ctaaaaaatg 5700 tctcttcaga aagaggacca atgggatgct cattatgatc caccttgtcc tttccatatt 5760 gtaatttgaa tcttttcaac tctagtgagg ttgtgattaa ttctaagctc tcgaaatctg 5820 gaactgttgc ccagactaaa acatcatcta aggcaacaaa ttcctgtttt ttcaactgat 5880 gaacacactt tgcaatccaa ttctcacagt tctttagttt gttgataagt ttattcctca 5940 attcattgag gtcaaaatat ctgtcattgg aaaacaatgc caactgacct gccataagtc 6000 cacacctcct gtattctgtc aacacttcag ggttctgttt ccatgagtga acaatgaagt 6060 tcaccataat taagtcaagg aacaacaaag tgtttcttct tgtgttcagc agtttagctg 6120 actttatttt attgcactga ctcaatagtt ttaaatagat ttgttcagct tgagaaagtg 6180 aatcactatg ccacattttc gcatagatgg gatgataatc gctatgaagt ggctgccgct 6240 ttaatgtacc taacttgtct attattgaat acaattttga tgaacatgac atgcaatcaa 6300 ctggatgttc actatgatgt gttatttgat ccaacttggc tagaaggcca tcacgatttg 6360 taaagacaaa cttatgaaga cttttgttgt ttttatactc tttaatgaag aattccttca 6420 agacgtttat tagattctct tggatttcac tttccttcat tttactggaa aggttcccaa 6480 acatatgttt ctttaactca tcgcgatatt taagcccagt ttgaggaagc ttttctatat 6540 tctcaaaacc cagactctga ttttctagct tggacagact agtaattaat ctctgatact 6600 caagctcctc aatctcttca ccagattccc tcacaaattt tattaactgc aataacagcc 6660 acctgaatct ttctatcacc caatcgtcta caaatctatt gtaatagttg gttctcccat 6720 caacaagggg aactaaggtg atcccacata aactaaggtc atcttttaat gacaacaact 6780 tgctcatgtc ctgattgtat ttctgttcaa aagacactgg attcaccctc acgaaggttt 6840 ccaaaagaat caaaacatta ccatatagtg aaaaaccatc tggtacgatt ctcggtaatg 6900 caatggacat tatgccctct ttcctcagaa tcccctcaat tgttagcgag tctgagttgt 6960 gagtgcagtt gttagcttcc gcagagtcta gttccactag taatgacaac aatttgaatc 7020 cttctgtaag gatcatttta gcatcattct ggcaggtaac taaggttatc tgttctgtta 7080 cttttggcct agctgggaaa tgcttcctaa gtagatcaaa taactgatta acaatatcat 7140 ccatgatcaa ggaatgccta ggatcctcgg tgcg 7174 // |
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