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EBI DbfetchID EU589328; SV 1; linear; genomic DNA; STD; PLN; 3733 BP. XX AC EU589328; XX DT 31-MAR-2009 (Rel. 100, Created) DT 31-MAR-2009 (Rel. 100, Last updated, Version 1) XX DE Hordeum vulgare subsp. vulgare cultivar Morex beta-amylase (bmy1) gene, DE complete cds. XX KW . XX OS Hordeum vulgare subsp. vulgare (domesticated barley) OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Pooideae; Triticeae; Hordeum. XX RN [1] RP 1-3733 RA Filichkin T.P., Helgesson J., Hayes P.M., Tanaka Y., Duke S.H., RA Henson C.A.; RT "DNA variation in the exons and introns of Bmy1 does not account for RT phenotypic variation in diastatic power, beta amylase 1 enzyme RT thermostability, or enzyme activity in experimental barley germplasm"; RL Unpublished. XX RN [2] RP 1-3733 RA Filichkin T.P., Helgesson J., Tanaka Y., Duke S.H., Henson C.A., RA Hayes P.M.; RT ; RL Submitted (24-MAR-2008) to the EMBL/GenBank/DDBJ databases. RL Crop and Soil Sciences Dept, Oregon State University, Crop Science Bldg., RL Rm. 107, Corvallis, OR 97331, USA XX FH Key Location/Qualifiers FH FT source 1..3733 FT /organism="Hordeum vulgare subsp. vulgare" FT /sub_species="vulgare" FT /cultivar="Morex" FT /mol_type="genomic DNA" FT /db_xref="taxon:112509" FT gene <30..>3667 FT /gene="bmy1" FT mRNA join(<30..80,293..691,1077..1241,2181..2444,2648..2857, FT 3036..3275,3389..>3667) FT /gene="bmy1" FT /product="beta-amylase" FT CDS join(30..80,293..691,1077..1241,2181..2444,2648..2857, FT 3036..3275,3389..3667) FT /codon_start=1 FT /gene="bmy1" FT /product="beta-amylase" FT /db_xref="GOA:Q84T20" FT /db_xref="HSSP:1B1Y" FT /db_xref="InterPro:IPR018238" FT /db_xref="UniProtKB/TrEMBL:Q84T20" FT /protein_id="ACF05415.1" FT /translation="MEVNVKGNYVQVYVMLPLDAVSVNNRFEKGDELRAQLRKLVEAGV FT DGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGGNVGDAVNIP FT IPQWVRDVGTCDPDIFYTDGHGTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSFRENM FT KEFLDAGVIVDIEVGLGPAGEMRYPSYPQSHGWSFPGIGEFICYDKYLQADFKAAAAAV FT GHPEWEFPNDVGQYNDTPERTQFFRDNGTYLSEKGRFFLAWYSNNLIKHGDRILDEANK FT VFLGYKVQLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFT FT CAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPH FT GINQSGPPEHKLFGFTYLRLSNQLVEGQNYANFKTFVDRMHANLPRDPYVDPMAPLPRS FT GPEISIEMILQAAQPKLQPFPFQEHTDLPVGPTGGMGGQAEGPTCGMGGQVKGPTGGMG FT GQAEDPTSGMGGELPATM" XX SQ Sequence 3733 BP; 1138 A; 782 C; 841 G; 972 T; 0 other; tagagcatca tccatagcca gcatccacaa tggaggtgaa cgtgaaaggc aactatgtcc 60 aagtctacgt catgctccct gtaagctccc atccattcag accaatcgct gagaaccaca 120 cactaaaact atttcaagga tctagtgcac acatatacat tattgttgta catataacat 180 tgatacttct tgtaaaactc taattcaaag ggtgaagaac aagatctgag gcctcaaatg 240 agtattttat ttgtactaac cttgactaca cttccattgt tgaaataaat agctggacgc 300 cgtgagcgtg aacaacaggt tcgagaaggg cgacgagctg agggcgcaat tgaggaagct 360 ggtagaggcc ggtgtggatg gtgtcatggt agacgtctgg tggggcttgg tggagggcaa 420 gggccccaag gcgtatgact ggtccgccta caagcagttg tttgagctgg tgcagaaggc 480 tgggctgaag ctacaggcca tcatgtcgtt ccaccagtgt ggtggcaacg tcggcgacgc 540 cgtcaacatc ccaatcccac agtgggtgcg ggacgtcggc acgtgtgatc ccgacatttt 600 ctacaccgac ggtcacggga ctaggaacat tgagtacctc actcttggag ttgataacca 660 gcctctcttc catggaagat ctgccgtcca ggttaattta aaccaccact ctagttctct 720 gatgcatata tagatataca tatttagata gaagttcaag atgacaccaa atacaagcaa 780 gacgttaaaa ggtgccaaaa actgacaagc aaaggaacaa aacctagcca atgaaacagt 840 gtagagccta tccaaaaaaa aaaaaccatc gagaaggtgc ctagagcgga tgggtttcta 900 caacccttta gctttcatgc atctttctgg gaaagggtga aaaacaccgt cctttaagtc 960 gattgatgca ggcagccttc tattgtttgt aagctatcag gaaatacaaa attaatagat 1020 agttgtcatt ttaatagttg tagcaagctt tgattcttct tttgtggctg tgacagatgt 1080 atgccgatta catgacaagc ttcagggaga acatgaaaga gttcttggat gctggtgtta 1140 tcgtcgacat tgaagtagga cttggcccag ctggagagat gaggtaccca tcatatcctc 1200 agagccacgg atggtcgttc ccaggcatcg gagaattcat cgtgagtgtt tgtttccaaa 1260 ctaataatct ttcctcttct gttccgatca aatataattt tagatgtaac tcaacatgtg 1320 aatatgtgat ggctaagtca cgatctacat ttagaaaagt tttttcaaga aacaaacacc 1380 caaatgaaaa gtgattctta aaggaaaaaa gtgcatggat aaaatggcag tttcagatta 1440 ggacaaggcg tggtaaacct gacttgatca tttctgttac ccaatatagc cccgcccaat 1500 ttttgtattt tcttattcct cccaaataag acatcatata aacaggaaaa tgatatttaa 1560 aatatgagaa atatatagga ttcatctgtg caacttaaat acttaaaatg atttttttat 1620 tggaaaagac taattttata tatttatggt acaccaaaaa tccaaaatgt tttcggcaca 1680 ttgtagtctc tatgattcat tgaccccaca cgtgcggttc cctcacgtct aaacgtggac 1740 tgtaaattta aatttttaaa ttgagtgtct tgggtcttga atttaagacc ttttgactcg 1800 gataccatgt aaaactgcac gcaccagaca gttcacccat aagctcttgc ttatggatac 1860 ttcaacaata agaatagtga ggtagcacaa accttgatgc aaggctagat gacactgatg 1920 tgtgtgtgtg ttgggggggg ggggggggat gcacctgaat ccgatttcag gaagtttggc 1980 actacttttg ccttccggga gaccatgtat gctattgttt gagcaaagta tcatagcaaa 2040 tacaagacca tcttaaaata catgacatga aatagttaaa acaaatgcac gataatatat 2100 accattacca ttacagaaaa aatggctcta ctcgtactta actgtttgaa ctaatagtac 2160 aaataaaaat aaaattgcag tgctatgata aatacctaca agcagacttc aaagcagcag 2220 cagcggcggt tggccatcct gagtgggaat ttcctaacga tgtcgggcag tacaatgaca 2280 ctcccgagag aactcaattc ttcagagaca acgggacata cctaagtgag aaggggaggt 2340 ttttccttgc atggtactcc aacaatctga tcaagcacgg tgacaggatc ttggatgaag 2400 caaacaaggt cttcttggga tacaaggtgc aactggcaat caaggtataa acacttccat 2460 gcatcctaaa gatctcggct tattactaca gtagtagata ggatttgaga aaccatggtt 2520 cagttgagaa gttgtgtatg ataaacaaca acaaaaatac acaaactatc caggctaagg 2580 gaactcgcat tgcttaatag ctagaatgta aatgagacat ggccggccaa ataatgtttg 2640 gttgcagatc tctggcattc actggtggta caaggttcca agccatgcag ccgagctcac 2700 agctgggtac tacaacttac atgatagaga cggctacaga accatagcac gcatgctcaa 2760 aaggcaccgt gctagcatta acttcacttg cgcggagatg agggattcgg agcaaagctc 2820 gcaggcgatg agcgcaccag aagaactagt ccaacaggta ggtaataact tatgcgttca 2880 gatatattac gcttatatat ctacgtatat actatgatgg aaacaccttt tttttttaga 2940 aaaggaggct tagctccggc ctctgcatcg aaagatgcat acgggccatg atgatgaaaa 3000 cacctaaatc acttgtcgtc aaaataattt ctcaggtgtt gagtgctgga tggagagagg 3060 gcctaaatgt ggcatgcgaa aacgcgcttc cacgatatga tccaactgct tacaacacca 3120 tactcaggaa tgcgaggcct catggaatca accagagcgg ccctcctgag cacaagctgt 3180 ttggattcac ctaccttcgg ctgtcgaatc agctggtgga gggacaaaac tatgccaatt 3240 tcaagacctt tgtcgacaga atgcatgcca acctggttag tgccacaacc acttactaac 3300 gcatgtcaaa aattaaacat atacaagaac catttgttga tttgcaggtg cctattatat 3360 actaataatt taattttatt gttttcagcc tcgtgaccca tatgttgatc caatggcgcc 3420 tttgccaaga tcagggccag aaatatcgat tgagatgatc ctacaagcag cacagccaaa 3480 actgcagcca ttccccttcc aggagcacac cgacctgcca gtaggcccta ctggtggcat 3540 gggtgggcag gctgaaggcc ccacctgtgg catgggtggg caagttaaag gccctactgg 3600 tggcatgggt gggcaggctg aagaccctac tagtggcatg ggtggggagc tccctgccac 3660 catgtaatgg aacctttatg atttactacc ctttatgttg tgtgtgagtg tgacagagaa 3720 acctttctct gcc 3733 // |
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