spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EU200967; SV 1; linear; genomic DNA; STD; PRO; 1362 BP.
XX
AC   EU200967;
XX
DT   01-NOV-2007 (Rel. 93, Created)
DT   11-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Agarivorans albus strain YKW-34 beta-agarase (agaB34) gene, complete cds.
XX
KW   .
XX
OS   Agarivorans albus
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Alteromonadaceae; Agarivorans.
XX
RN   [1]
RP   1-1362
RX   PUBMED; 19349750.
RA   Fu X.T., Pan C.H., Lin H., Kim S.M.;
RT   "Gene cloning, expression, and characterization of a beta-agarase,
RT   agaB34,from Agarivorans albus YKW-34";
RL   J. Microbiol. Biotechnol. 19(3):257-264(2009).
XX
RN   [2]
RP   1-1362
RA   Fu X.T., Pan C.-H., Kim S.M.;
RT   ;
RL   Submitted (10-OCT-2007) to the EMBL/GenBank/DDBJ databases.
RL   Faculty of Marine Bioscience & Technology, Kangnung National University,
RL   120 Gangneungdaehakro, Gangneung, Gangwondo 210-702, Korea
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1362
FT                   /organism="Agarivorans albus"
FT                   /strain="YKW-34"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:182262"
FT   gene            1..1362
FT                   /gene="agaB34"
FT   CDS             1..1362
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="agaB34"
FT                   /product="beta-agarase"
FT                   /EC_number="3.2.1.81"
FT                   /note="AgaB34"
FT                   /db_xref="GOA:A8W969"
FT                   /db_xref="InterPro:IPR000772"
FT                   /db_xref="UniProtKB/Swiss-Prot:A8W969"
FT                   /protein_id="ABW77762.1"
FT                   /translation="MKGFTKHSILMACSIGLAINATAADWDNIPIPAELDAGQSWELQQ
FT                   NYSDSFNYSGKNSTFTGKWKDSYFHSWTGPGLTHWSSDESWVGDGNLIISASRRQGTNK
FT                   VNAGVITSKTKVKYPIFLEASIKVSNLELSSNFWLLSENDQREIDVLEVYGGARQDWYA
FT                   KNMSTNFHVFFRNNDNSIKNDYNDQTHFTPTWGNYWRDGFHRFGVYWKSPTDVTFYIDG
FT                   QKTTKGAWSQVVMKDKDYTGAILDKSRYNMDQEAFIIIDTEDHSWRSEAGHIATDADLA
FT                   DSDKNKMYVDWIRVYKPTGGSTTPPTGDITPPSGYTNLQLAHSNRCVDVINGALWNGST
FT                   YQQYSCNTGNNNQRFKFTKIANNQYSINAKVSQLCMELASGSSANGAKVQQWICNHANS
FT                   NQTWSLEDKGSNTFEIRNKQSGKCLEVANSSNANGGQIRQWACTGATNQRFKFL"
XX
SQ   Sequence 1362 BP; 431 A; 313 C; 299 G; 319 T; 0 other;
     atgaaaggat tcaccaaaca ttcaatctta atggcgtgca gtattggctt agcaataaat        60
     gcaacagctg ctgattggga taacatcccc attcctgccg aactagacgc aggacaatct       120
     tgggagttac aacaaaacta ttctgactct tttaactact caggcaaaaa cagcacgttt       180
     accggcaaat ggaaagacag ttactttcat agctggacag gcccaggcct tactcactgg       240
     tcgagcgatg aatcgtgggt tggtgacggc aacctcatca ttagtgcttc gcgtcgccag       300
     ggcaccaaca aagtaaacgc aggggtcatc acctctaaaa ccaaagtaaa ataccccatc       360
     tttttagaag ccagtatcaa ggtgagtaac ttagagcttt catccaactt ctggttgtta       420
     agcgaaaacg accagcgtga aatagatgta ttagaggtat acggtggcgc tcgccaagat       480
     tggtacgcta agaacatgtc gaccaacttt catgttttct tccgtaataa cgacaactcg       540
     ataaaaaatg attacaacga ccagactcac ttcacaccca cttggggaaa ctactggcgt       600
     gacggtttcc accgctttgg tgtgtattgg aagagtccaa cagacgttac tttttacatc       660
     gatggtcaaa aaaccacaaa aggcgcttgg agccaggtgg taatgaaaga caaagattac       720
     accggtgcca ttcttgataa gagccgctac aacatggatc aagaagcatt cattattatt       780
     gatactgaag accactcttg gcgctctgaa gcaggccaca tcgccactga tgcagattta       840
     gccgacagtg ataaaaacaa gatgtatgta gattggatcc gcgtttacaa accaacgggc       900
     ggttccacta ccccacctac tggcgatatt acgccaccga gtggttacac caatttacaa       960
     ctggcacaca gcaatcgttg tgttgatgtc atcaatggcg ccttatggaa tggcagtact      1020
     taccagcagt attcgtgtaa cacgggcaac aacaatcaac ggttcaagtt cactaaaata      1080
     gccaacaatc aatacagcat taatgccaag gtaagtcagc tttgtatgga gcttgcatct      1140
     ggcagctcgg caaatggcgc taaggtgcag caatggatat gtaatcacgc caactctaat      1200
     caaacatgga gcctagaaga caagggcagt aatacttttg aaattagaaa taaacaaagc      1260
     ggaaaatgct tagaggtcgc caacagttca aacgcaaatg gtggacaaat taggcaatgg      1320
     gcctgcactg gcgcgactaa ccagcgcttc aaattcttgt ag                         1362
//
spacer
spacer