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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EU002049; SV 1; linear; genomic DNA; STD; VRT; 870 BP.
XX
AC   EU002049;
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DT   30-JUN-2008 (Rel. 96, Created)
DT   15-JUL-2008 (Rel. 96, Last updated, Version 2)
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DE   Herichthys cyanoguttatus isolate M29 glycosyltransferase (glyt) gene,
DE   partial cds.
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KW   .
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OS   Herichthys cyanoguttatus
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei;
OC   Cichlidae; New World cichlids; Cichlasomatinae; Heroini; Herichthys.
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RN   [1]
RP   1-870
RX   DOI; 10.1080/10635150802206883
RX   PUBMED; 18622808.
RA   Li C., Lu G., Orti G.;
RT   "Optimal data partitioning and a test case for ray-finned fishes
RT   (Actinopterygii) based on ten nuclear loci";
RL   Syst. Biol. 57(4):519-539(2008).
XX
RN   [2]
RP   1-870
RA   Li C., Orti G.;
RT   ;
RL   Submitted (25-JUN-2007) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, University of Nebraska, 348 Manter, Lincoln,
RL   NE 68588-0118, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..870
FT                   /organism="Herichthys cyanoguttatus"
FT                   /isolate="M29"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:8117"
FT   gene            <1..>870
FT                   /gene="glyt"
FT   mRNA            <1..>870
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT   CDS             <1..>870
FT                   /codon_start=1
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT                   /db_xref="GOA:B3SVY9"
FT                   /db_xref="UniProtKB/TrEMBL:B3SVY9"
FT                   /protein_id="ABV65029.1"
FT                   /translation="GPKANILISGNEIRQFARALMEKMNITRVEEAEKDGGSTEDEKEK
FT                   EKKDEYIVVFSRSTTRLILNEAELIMALAQEFQMRVVTVSLEEQSFPSIVQVISGASML
FT                   VSMHGAQLITSLFLPRGAAVVELFPFAVNPEQYTPYRTLASLPGMDLHYVSWRNTKEEN
FT                   TVTHPERPWEQGGIAHLEKEEQERIQASKDVPRHLCCRNPEWLFRIYQDTLVDIPSFLE
FT                   VLREGMKTKPSLKKAKVASTVHPGRVREPRCQTSVQTTNEAKLTVSWQIPWNLKFLKVR
FT                   EVKYEVWIQ"
XX
SQ   Sequence 870 BP; 254 A; 203 C; 229 G; 184 T; 0 other;
     ggacccaaag ccaacatctt gatctcaggc aatgagatca ggcagtttgc cagagcactt        60
     atggagaaaa tgaacattac aagggtggag gaggcagaga aggatggagg aagcacagaa       120
     gatgagaagg agaaagagaa gaaggatgaa tacattgttg tattcagtcg ttcaacaaca       180
     agactcatac tgaatgaagc agagctaatc atggcgctgg cccaagagtt ccagatgaga       240
     gtggtcacag tgtccttgga agaacagtct ttccccagta ttgtccaggt gatcagcggt       300
     gcttccatgt tagtcagcat gcatggagct cagcttatca cctcgctctt cctccctaga       360
     ggtgctgctg tggtggagct gttccctttt gctgtgaacc cagagcagta cactccatat       420
     agaacccttg cctctcttcc aggcatggac cttcattatg tctcctggag gaacactaag       480
     gaggagaata ctgtcaccca cccagaaaga ccctgggaac aaggaggcat tgctcacttg       540
     gaaaaagagg agcaggagcg aattcaggca agcaaggatg tccccaggca cctttgctgc       600
     cgcaaccctg agtggctctt ccggatttat caggacactt tggtggacat cccatccttt       660
     ctggaagtcc tcagagaagg catgaagacc aagcccagct taaaaaaggc caaggtagcc       720
     agcacagtcc atccgggccg ggtcagagaa cccagatgtc agacttcagt acaaaccact       780
     aatgaggcta aactaacagt ctcttggcag atcccgtgga atttgaaatt cctgaaagtt       840
     agagaggtga agtacgaggt gtggatccaa                                        870
//
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