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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EF541467; SV 1; linear; viral cRNA; STD; VRL; 1350 BP.
XX
AC   EF541467;
XX
DT   21-APR-2007 (Rel. 91, Created)
DT   25-APR-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Influenza A virus (A/Viet Nam/1203/2004(H5N1)) segment 6 neuraminidase (NA)
DE   gene, complete cds.
XX
KW   .
XX
OS   Influenza A virus (A/Viet Nam/1203/2004(H5N1))
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
XX
RN   [1]
RP   1-1350
RX   PUBMED; 16318689.
RG   World Health Organization Global Influenza Program Surveillance Network
RA   ;
RT   "Evolution of H5N1 avian influenza viruses in Asia";
RL   Emerg. Infect. Dis. 11(10):1515-1521(2005).
XX
RN   [2]
RP   1-1350
RA   Xu X.;
RT   ;
RL   Submitted (19-MAR-2007) to the EMBL/GenBank/DDBJ databases.
RL   Influenza Branch, Centers for Disease Control and Prevention, 1600 Clifton
RL   Road MS G-16, Atlanta, GA 30333, USA
XX
CC   Sequence entered by GenBank staff on behalf of submitter.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1350
FT                   /organism="Influenza A virus (A/Viet Nam/1203/2004(H5N1))"
FT                   /segment="6"
FT                   /host="Homo sapiens"
FT                   /strain="A/Viet Nam/1203/2004"
FT                   /serotype="H5N1"
FT                   /mol_type="viral cRNA"
FT                   /country="Viet Nam"
FT                   /collection_date="2004"
FT                   /note="CDC ID: 2004706280"
FT                   /db_xref="taxon:284218"
FT   gene            1..1350
FT                   /gene="NA"
FT   CDS             1..1350
FT                   /codon_start=1
FT                   /gene="NA"
FT                   /product="neuraminidase"
FT                   /db_xref="GOA:Q6DPL2"
FT                   /db_xref="InterPro:IPR001860"
FT                   /db_xref="PDB:2HTY"
FT                   /db_xref="UniProtKB/TrEMBL:Q6DPL2"
FT                   /protein_id="ABP52008.1"
FT                   /translation="MNPNQKIITIGSICMVTGIVSLMLQIGNMISIWVSHSIHTGNQHQ
FT                   SEPISNTNFLTEKAVASVKLAGNSSLCPINGWAVYSKDNSIRIGSKGDVFVIREPFISC
FT                   SHLECRTFFLTQGALLNDKHSNGTVKDRSPHRTLMSCPVGEAPSPYNSRFESVAWSASA
FT                   CHDGTSWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVM
FT                   TDGPSNGQASHKIFKMEKGKVVKSVELDAPNYHYEECSCYPNAGEITCVCRDNWHGSNR
FT                   PWVSFNQNLEYQIGYICSGVFGDNPRPNDGTGSCGPVSSNGAYGVKGFSFKYGNGVWIG
FT                   RTKSTNSRSGFEMIWDPNGWTETDSSFSVKQDIVAITDWSGYSGSFVQHPELTGLDCIR
FT                   PCFWVELIRGRPKESTIWTSGSSISFCGVNSDTVGWSWPDGAELPFTIDK"
XX
SQ   Sequence 1350 BP; 400 A; 249 C; 341 G; 360 T; 0 other;
     atgaatccaa atcagaagat aataaccatc ggatcaatct gtatggtaac tggaatagtt        60
     agcttaatgt tacaaattgg gaacatgatc tcaatatggg tcagtcattc aattcacaca       120
     gggaatcaac accaatctga accaatcagc aatactaatt ttcttactga gaaagctgtg       180
     gcttcagtaa aattagcggg caattcatct ctttgcccca ttaacggatg ggctgtatac       240
     agtaaggaca acagtataag gatcggttcc aagggggatg tgtttgttat aagagagccg       300
     ttcatctcat gctcccactt ggaatgcaga actttctttt tgactcaggg agccttgctg       360
     aatgacaagc actccaatgg gactgtcaaa gacagaagcc ctcacagaac attaatgagt       420
     tgtcctgtgg gtgaggctcc ctccccatat aactcaaggt ttgagtctgt tgcttggtca       480
     gcaagtgctt gccatgatgg caccagttgg ttgacgattg gaatttctgg cccagacaat       540
     ggggctgtgg ctgtattgaa atacaatggc ataataacag acactatcaa gagttggagg       600
     aacaacatac tgagaactca agagtctgaa tgtgcatgtg taaatggctc ttgctttact       660
     gtaatgactg acggaccaag taatggtcag gcatcacata agatcttcaa aatggaaaaa       720
     gggaaagtgg ttaaatcagt cgaattggat gctcctaatt atcactatga ggaatgctcc       780
     tgttatccta atgccggaga aatcacatgt gtgtgcaggg ataattggca tggctcaaat       840
     cggccatggg tatctttcaa tcaaaatttg gagtatcaaa taggatatat atgcagtgga       900
     gttttcggag acaatccacg ccccaatgat ggaacaggta gttgtggtcc ggtgtcctct       960
     aacggggcat atggggtaaa agggttttca tttaaatacg gcaatggtgt ctggatcggg      1020
     agaaccaaaa gcactaattc caggagcggc tttgaaatga tttgggatcc aaatgggtgg      1080
     actgaaacgg acagtagctt ttcagtgaaa caagatatcg tagcaataac tgattggtca      1140
     ggatatagcg ggagttttgt ccagcatcca gaactgacag gactagattg cataagacct      1200
     tgtttctggg ttgagttgat cagagggcgg cccaaagaga gcacaatttg gactagtggg      1260
     agcagcatat ctttttgtgg tgtaaatagt gacactgtgg gttggtcttg gccagacggt      1320
     gccgagttgc cattcaccat tgacaagtag                                       1350
//
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