EBI Dbfetch

ID   EF160111; SV 1; linear; mRNA; STD; INV; 939 BP.
XX
AC   EF160111;
XX
DT   01-JAN-2008 (Rel. 94, Created)
DT   01-JAN-2008 (Rel. 94, Last updated, Version 1)
XX
DE   Branchiostoma floridae ST8 alpha-N-acetyl-neuraminide
DE   alpha-2,8-sialyltransferase 1b (sia1) mRNA, complete cds, alternatively
DE   spliced.
XX
KW   .
XX
OS   Branchiostoma floridae (Florida lancelet)
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae;
OC   Branchiostoma.
XX
RN   [1]
RP   1-939
RA   Harduin-Lepers A., Petit D.P., Petit J.-M., Oriol R.;
RT   "Advances in the Evolution of Vertebrate Syalyltransferases";
RL   Unpublished.
XX
RN   [2]
RP   1-939
RA   Petit D.P., Petit J.-M.;
RT   ;
RL   Submitted (06-DEC-2006) to the EMBL/GenBank/DDBJ databases.
RL   INRA UMR 1061, Universite de Limoges, 123, av. A. Thomas, Limoges 87060,
RL   France
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..939
FT                   /organism="Branchiostoma floridae"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:7739"
FT   gene            1..939
FT                   /gene="sia1"
FT   CDS             1..939
FT                   /codon_start=1
FT                   /gene="sia1"
FT                   /product="ST8 alpha-N-acetyl-neuraminide
FT                   alpha-2,8-sialyltransferase 1b"
FT                   /note="st8sia1b; alternatively spliced"
FT                   /db_xref="GOA:A9XBL8"
FT                   /db_xref="InterPro:IPR001675"
FT                   /db_xref="InterPro:IPR012163"
FT                   /db_xref="UniProtKB/TrEMBL:A9XBL8"
FT                   /protein_id="ABO40443.1"
FT                   /translation="MSPVSLNIFHKNATRLEITTKALAQRYNLLRNTTAQPRVTTGPTS
FT                   TPHSVLSNWTYNAGEMKKIRVDTRMLHPDVRLLPRKLGIWPGTCERKVGNSCQFLKHSV
FT                   GFHKTCAVVGNGGILLDSHCGAEIDSKDYIIRMDLPAIRGFETDVGRKTNMTILNVSTP
FT                   KRVAISSHLKDRTRDVYESRLRDINGSVLVAGDSLEMNNLKKAIQNYEKYKIPFSFVLL
FT                   TSHGSFKLGKLIRSAPSTGLGTVLTATAFCDQIYMYGFFPCYEQKDTHKRPLPYHYYPG
FT                   NSIEPIFLDSLHRMDKEFNFYKSLHERALSN"
XX
SQ   Sequence 939 BP; 272 A; 248 C; 214 G; 205 T; 0 other;
     atgtcgccgg tctcactcaa catcttccat aagaacgcca ccagattgga gataacaaca        60
     aaggcacttg cacaacgcta caacctactc agaaacacca ctgcacagcc acgtgttacc       120
     acaggtccga cgtctacacc tcactctgtg ttatcgaact ggacatataa tgcaggagag       180
     atgaagaaaa tcagagtaga cacaagaatg ttacaccccg acgtgagact cctgccgcga       240
     aagttgggca tctggcctgg cacctgcgag aggaaagtcg ggaactcctg ccagttctta       300
     aaacatagcg tcggtttcca caaaacgtgt gcagtagtag gaaacggtgg catcctattg       360
     gacagtcact gcggtgctga aattgattcg aaggattaca tcatacgtat ggacctacca       420
     gccatcaggg ggttcgagac agacgttggc cgaaagacca acatgactat tttaaacgtc       480
     agcacaccaa aacgggtcgc tatttcgtct catttgaaag acaggactcg ggatgtttac       540
     gaaagtcgtt tgcgagacat caacgggtca gttctagtgg caggggacag cctggagatg       600
     aacaacctga agaaggctat acagaactac gaaaagtata agattccgtt ttccttcgtc       660
     ttgttgacca gccacggcag cttcaaattg gggaaactga ttcgcagtgc tccctccacg       720
     ggcctgggta cagttctcac cgccaccgcc ttctgtgacc agatctacat gtacggcttc       780
     ttcccatgtt atgagcaaaa ggacacgcac aagagacctc tcccctacca ctactaccct       840
     ggcaactcca tagaaccgat attcctggac tcacttcacc gcatggataa ggaattcaac       900
     ttctacaaaa gccttcatga acgggcgttg tcaaattga                              939
//