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EBI DbfetchID EF147319; SV 1; linear; mRNA; STD; PLN; 1610 BP. XX AC EF147319; XX DT 02-DEC-2007 (Rel. 94, Created) DT 25-MAR-2009 (Rel. 100, Last updated, Version 2) XX DE Populus trichocarpa clone WS0122_J10 unknown mRNA. XX KW FLI_CDNA. XX OS Populus trichocarpa OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids I; Malpighiales; Salicaceae; Saliceae; Populus. XX RN [1] RC Publication Status: Online-Only RP 1-1610 RX DOI; 10.1186/1471-2164-9-57 RX PUBMED; 18230180. RA Ralph S.G., Chun H.J., Cooper D., Kirkpatrick R., Kolosova N., Gunter L., RA Tuskan G.A., Douglas C.J., Holt R.A., Jones S.J., Marra M.A., Bohlmann J.; RT "Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA RT clones and their utility for the discovery of genes responding to insect RT feeding"; RL BMC Genomics 9:57-57(2008). XX RN [2] RP 1-1610 RA Ralph S.G., Chun H.J.E., Cooper D., Kirkpatrick R., Palmquist D., RA Wynhoven B., Kolosova N., Oddy C., Jancsik S., Douglas C.J., Liu J., RA Butterfield Y.S.N., Stott J., Yang G., Holt R.A., Siddiqui A., RA Jones S.J.M., Marra M.A., Ritland K., Bohlmann J.; RT ; RL Submitted (28-NOV-2006) to the EMBL/GenBank/DDBJ databases. RL Genome BC Forest Genomics Program, University of British Columbia, Michael RL Smith Laboratories, 2185 East Mall, Rm. 321, Vancouver, British Columbia RL V6T 1Z4, Canada XX FH Key Location/Qualifiers FH FT source 1..1610 FT /organism="Populus trichocarpa" FT /cultivar="383-2499 (Nisqually-1)" FT /mol_type="mRNA" FT /sex="Female" FT /clone_lib="PT-GT-FL-A-3" FT /clone="WS0122_J10" FT /tissue_type="Young and mature leaves, along with green FT stems, from 8 year old trees harvested within the Boise FT Cascade region of Washington state on May 15th, 2001." FT /db_xref="taxon:3694" FT CDS 116..1387 FT /codon_start=1 FT /product="unknown" FT /note="similar to Arabisopsis thaliana At2g47760" FT /db_xref="GOA:A9PG35" FT /db_xref="InterPro:IPR007873" FT /db_xref="UniProtKB/TrEMBL:A9PG35" FT /protein_id="ABK95338.1" FT /translation="MALKPGRKLQPSRSRRPQIFKNPKAAFALALIFMDALLVALIIAY FT VPYTKIDWDAYMSQVTGFLGGERDYTNLKGDTGPLVYPAGFLYIYSAIRFITGGEVYPA FT QILFGILYIINLSIVIFIYVKTEVLPWWALILLSLSKRVHSIFVLRLFNDCFAMTLLHA FT ALATILYQKWHLGLILFSGAVSIKMNVLLYAPPLLLLMLKAMNIYGVISALACAALVQI FT LAGLPFLVSHPIAYISRAFNLGRVFIHFWSVNFKFIPEPVFVSKQFAISLLIAHLGLLA FT TFAHYKWCRHEGGLFKFLHSKVTSALSSSSSSGLKILKEEHIMTTLFAGNFIGIVCARS FT LHYQFYSWYFYSLPYLLWKTHFPTSLRLILFVGVEFCWNVYPSNNYSSALLLCLHLLIL FT WGLWSAQSEYPYVEEKLSTRKKEK" XX SQ Sequence 1610 BP; 395 A; 362 C; 306 G; 547 T; 0 other; gagctctcct ttattctcta tcattagctc cagggcatgt attcttgcct ctctctttct 60 ttcaatcgta actgtaacga agcatagcag ggagacgaca aaggaaagcc atcccatggc 120 tctcaaacca ggcagaaagc tacaaccctc acgctcacga agaccccaga ttttcaaaaa 180 ccccaaagcg gccttcgcat tggctttaat tttcatggat gccctcctcg tcgctcttat 240 catcgcttac gttccctata ccaaaattga ctgggacgct tacatgtcac aggttactgg 300 gtttcttgga ggagaaaggg actacactaa cttgaaaggc gatacggggc cactggttta 360 tcctgctggt tttctgtata tttactcagc cattcgattt attacaggag gggaggttta 420 tccagctcag atcttgtttg gcatcttata catcataaac ctgtctatcg tcatcttcat 480 ctatgtgaaa actgaagtgc ttccttggtg ggctcttatc ctgctttctc tctcaaaaag 540 agtgcactcg atctttgttc ttcgcctctt caatgactgt tttgcaatga cactcctcca 600 tgctgcattg gccacgattc tttaccaaaa gtggcatctg ggactgattc ttttcagtgg 660 ggctgtttcg ataaagatga atgtgctcct ctatgctcca cctttgttac tcctcatgtt 720 gaaggctatg aatatctacg gggtgatatc ggctttagct tgtgcagccc tggttcagat 780 tttggcgggg ctgccctttt tagtctcaca tccgatcgca tatatatcaa gagccttcaa 840 tcttggtcgt gtgttcatcc acttttggtc tgttaacttc aagttcattc ctgaaccagt 900 ttttgtatca aagcaatttg caatctcttt gctgattgct caccttgggt tgcttgctac 960 ttttgctcat tataaatggt gcaggcacga aggaggactt tttaagtttt tgcattctaa 1020 agttacatct gcactttcaa gttctagcag ttcaggcctt aagattctca aggaagaaca 1080 tatcatgaca actctgtttg ctgggaactt cattggcatt gtatgcgctc gctcgctgca 1140 ttatcaattt tattcttggt acttctatag cttgccttac ctattgtgga aaacacattt 1200 cccaacatca ctccgtttga ttttgtttgt aggtgtggag ttttgctgga atgtctatcc 1260 ttcaaacaat tattcatctg ctcttcttct ctgtctccat ttacttatac tatggggcct 1320 atggtctgct caatctgaat atccttatgt ggaggagaaa ttgtccacta gaaagaagga 1380 aaaatgagtc tccaaggttt ttttttgttt tgtttcagaa gaattctctc tttcccccga 1440 tgtaattttg gaactcaaaa tcaaatatgg aaaagcaaca tgaatgcaaa acagagagaa 1500 caacagagta gctccttcct ctgcactcct ttttattttt atcttcgttt aacaaatcga 1560 aatctcgtat ttgcttttat ggtttgattg tgccaaaaaa aaaaaaaaaa 1610 // |
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