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EBI DbfetchID EF146066; SV 1; linear; mRNA; STD; PLN; 1681 BP. XX AC EF146066; XX DT 02-DEC-2007 (Rel. 94, Created) DT 25-MAR-2009 (Rel. 100, Last updated, Version 2) XX DE Populus trichocarpa clone WS0115_E18 unknown mRNA. XX KW FLI_CDNA. XX OS Populus trichocarpa OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; OC eurosids I; Malpighiales; Salicaceae; Saliceae; Populus. XX RN [1] RC Publication Status: Online-Only RP 1-1681 RX DOI; 10.1186/1471-2164-9-57 RX PUBMED; 18230180. RA Ralph S.G., Chun H.J., Cooper D., Kirkpatrick R., Kolosova N., Gunter L., RA Tuskan G.A., Douglas C.J., Holt R.A., Jones S.J., Marra M.A., Bohlmann J.; RT "Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA RT clones and their utility for the discovery of genes responding to insect RT feeding"; RL BMC Genomics 9:57-57(2008). XX RN [2] RP 1-1681 RA Ralph S.G., Chun H.J.E., Cooper D., Kirkpatrick R., Palmquist D., RA Wynhoven B., Kolosova N., Oddy C., Jancsik S., Douglas C.J., Liu J., RA Butterfield Y.S.N., Stott J., Yang G., Holt R.A., Siddiqui A., RA Jones S.J.M., Marra M.A., Ritland K., Bohlmann J.; RT ; RL Submitted (28-NOV-2006) to the EMBL/GenBank/DDBJ databases. RL Genome BC Forest Genomics Program, University of British Columbia, Michael RL Smith Laboratories, 2185 East Mall, Rm. 321, Vancouver, British Columbia RL V6T 1Z4, Canada XX FH Key Location/Qualifiers FH FT source 1..1681 FT /organism="Populus trichocarpa" FT /cultivar="383-2499 (Nisqually-1)" FT /mol_type="mRNA" FT /sex="Female" FT /clone_lib="PT-P-FL-A-2" FT /clone="WS0115_E18" FT /tissue_type="Phloem and cambium from 8 year old trees FT harvested within the Boise Cascade region of Washington FT state on May 15th, 2001." FT /db_xref="taxon:3694" FT CDS 387..1478 FT /codon_start=1 FT /product="unknown" FT /note="similar to Arabisopsis thaliana At2g13290" FT /db_xref="GOA:A9PCR7" FT /db_xref="InterPro:IPR006813" FT /db_xref="UniProtKB/TrEMBL:A9PCR7" FT /protein_id="ABK94170.1" FT /translation="MAPRLLRLAYRRVTFKVVFFILLILVPICVIGILTHAQHVSYFLR FT PLWDNPPPPFKHLPHYYAENVSMEHLCHLHGWSLRSEPRRVFDAIIFSNELDVLEIRWH FT ELYPYITKFVILESNTTFTGIPKPLFFDSNRSRFAFAKEKIVHGVFSGRIAARGKNEDP FT FVLEFEQRKAMSGLLRSSGISYGDLIIMSDADEIPSPHTLKLLQWCDEIPHAMHLELKH FT YMYSFEFPVDYSSWRATIQIFGPRTGYRHSRQTDLILSDSGWHCSFCFRRLQEFVFKMT FT AYSHADRVRRNEFLNYSRIQKIICSGDDLFDMLPEEHTFQELIKKMGPIPHSASAVHLP FT SYLIENADKFRFLLPGNCLRTLE" XX SQ Sequence 1681 BP; 438 A; 377 C; 347 G; 519 T; 0 other; ccggctctcc cgtcataaaa gtattttcca tttctgcttt ctgctttctg ctttctgcga 60 ctctgcttgg ctgaaaacgg tgccgtatta aaatgggaaa ttttcatcga atctattcat 120 ttaattaatg aatctccaga tcctgaactt ggtttaattg agcctcttgt gatccaagca 180 gaatgacaca gaaagataaa tatagccggc ccctactagt ttgggtttga ggcttggttg 240 ttgctgcaca gcttgtttcg attactgtcc ccttgagttt agcaaactaa aattaggtga 300 ctgaagttgg aagaagcatg gctttggggt ttcctgaatc gggaccatgc atgtaactgc 360 accgttcaat ctttctaaac caaatcatgg cccctagact ccttcgctta gcctacagaa 420 gagtaacctt caaggttgtt ttcttcatac tgctgatact tgtgccaatt tgtgtgattg 480 gaatcctcac acatgcccag catgtctcct actttttacg tccactttgg gacaaccccc 540 ctcctccctt taaacaccta cctcactatt atgcagagaa tgtctcaatg gaacatcttt 600 gccacctaca tggttggtcc ctacgatctg agcctcgccg tgtatttgat gccatcatct 660 ttagcaatga gctagacgtt cttgagatca gatggcacga gctttatcct tacatcacta 720 aatttgtaat cctcgaatcg aataccactt tcactggcat ccccaagcct ctcttctttg 780 actcaaaccg gtctagattt gcctttgcga aggagaagat tgtccatggt gtattttcag 840 gccgaattgc tgcccgtgga aaaaatgaag acccttttgt acttgagttt gagcagcgga 900 aagctatgag tggattgctc cgcagttcag gaatttccta cggtgacttg atcattatgt 960 cagatgcaga tgagattcca agcccacaca cattgaaact actgcagtgg tgtgatgaaa 1020 ttccacatgc catgcacctt gagctcaagc actacatgta ctcatttgag tttcctgtag 1080 attacagtag ctggcgggcc acaatccaga tttttggccc tcgcaccggt taccggcatt 1140 cacgccaaac tgaccttatt ctctctgatt ctgggtggca ctgtagtttt tgctttcgcc 1200 gacttcagga atttgtgttt aagatgactg catatagtca tgcagataga gttaggagga 1260 atgaattttt gaactactct agaattcaga aaatcatttg cagtggagat gatctctttg 1320 atatgctacc tgaggagcac acctttcagg agctgattaa gaagatggga ccaatacccc 1380 attcagcttc tgcggtccac ctcccgtcat atttgataga gaatgcggat aagtttaggt 1440 ttcttcttcc tgggaattgt ttacgaacat tggaatgaag ttattggcag tccgaatcaa 1500 aatgagtaaa atatgtagat gcagtgcagt gcagaactct gtcattgttc cttttccttt 1560 ttaggcctca aatgcccagt tctgtaaagg gatgtctagt tgtataacag ttgtctagtt 1620 gtgtaacagt tgcaaacaaa gaaaaaattg tcttgctccg gtcccaaaaa aaaaaaaaaa 1680 a 1681 // |
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