 |
|
EBI DbfetchID EF107728; SV 1; linear; genomic DNA; STD; FUN; 3726 BP. XX AC EF107728; XX DT 23-JUL-2007 (Rel. 92, Created) DT 23-JUL-2007 (Rel. 92, Last updated, Version 1) XX DE Pichia angusta Atg26p (atg26) gene, complete cds. XX KW . XX OS Pichia angusta OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; OC Saccharomycetales; Saccharomycetaceae; Pichia. XX RN [1] RP 1-3726 RX PUBMED; 17204848. RA Meijer W.H., van der Klei I.J., Veenhuis M., Kiel J.A.K.W.; RT "ATG genes involved in non-selective autophagy are conserved from yeast to RT man, but the selective Cvt and pexophagy pathways also require RT organism-specific genes"; RL Autophagy 3(2):106-116(2007). XX RN [2] RP 1-3726 RA Dahlems U., Kiel J.A.K.W.; RT ; RL Submitted (07-NOV-2006) to the EMBL/GenBank/DDBJ databases. RL Eukaryotic Microbiology, Groningen Biomolecular Sciences and Biotechnology RL Institute, University of Groningen, Kerklaan 30, Haren NL-9751 NN, The RL Netherlands XX DR StrainInfo; 177035; CBS 4732. XX FH Key Location/Qualifiers FH FT source 1..3726 FT /organism="Pichia angusta" FT /strain="CBS4732" FT /mol_type="genomic DNA" FT /db_xref="taxon:4905" FT gene <1..>3726 FT /gene="atg26" FT mRNA <1..>3726 FT /gene="atg26" FT /product="Atg26p" FT CDS 1..3726 FT /codon_start=1 FT /gene="atg26" FT /product="Atg26p" FT /note="involved in autophagy-related processes" FT /db_xref="GOA:A7KAK6" FT /db_xref="InterPro:IPR001849" FT /db_xref="InterPro:IPR004182" FT /db_xref="InterPro:IPR004276" FT /db_xref="InterPro:IPR011993" FT /db_xref="UniProtKB/Swiss-Prot:A7KAK6" FT /protein_id="ABO31066.1" FT /translation="MSGIESTEEPCDSMTESQSLSPLEPEERQTRKDSGLQSQSLTKRH FT FAFSPHRLITSISRHTSPHKPRPKSESRVPVPKLHSLPPQRLASPERDKPSIEGISKSF FT VSFLTAASVYAGFQDLEGEDQQVSPDDVSAGESEDQQADESSDEQEDDDQDDRTFYATD FT PSPTELTINENTPLPEPEPPRRTLRKARSRFEFSVVKRLSENENDQLAQKRAIALSNKL FT KRTFDISDTDVFISDYPCWLMGDVLLQGHLYITKHHILFFAFLPKKQGSISKSGALTTK FT SYPSLREHRKWAVLRNNTFSVYSNSTDLYFPLLVIDLRTALRAEILQSSSTKQNPSKPV FT WIRIITESRTHWFLADNLASARSWVSSLKKHIFASRNKGDQVAIKIPLQNVVDLELTSV FT IGVTKNLRIKVIESADTFAIDDYFLMFFSRGEKAVEDIKKVIHDAGMEISEGTSTESED FT EQGVDNNLLKSKIELLKKSPSMVQTSSKSNVPVIRMDEPADDFSQEQESAESSKPVSDD FT EIVSADDNQELEEKQPQDNLANAEKENHDKVSRANSRRTWSTRSLVQGLTAITQGWMSP FT SPMAHFDEKYAVLRGEEDSYFVKDAEQRKAATERFRKHFSLTDGEKLIATYHAYLVKGI FT PAYGKIYLGSNEMCFRSTLPGTGTIMILPFSDIENVNKEKGFRFGYSGLVVVIHGHEEL FT FFEFASDQARDDCEFMLLKQMDMFKKGSTDSSPPNASEGSSDESCNLAESNTSLASARL FT RMFENRIHDAIGLDVPIIIEEHPLTKTKVRPLKSYRFTLLTIGSRGDVQPYIALGKALM FT KEGHQVRIVTHAEFEPWIKKHGIRFASIAGDPSELMALMVTHPTINYNFIKEAKSKFRS FT WIDDLLVTSWKACQDTDILIESPSSICGIHIAEKLQIPYFRAFTMPWTRTRAYPHAFMV FT PDQKLGGAYNYMTHVAFENGYWRGTAHQVNKWRVETLGLPKTSLAEMKQNNVPFLYNVS FT PTVFPPSVDFAEWVKVTGYWFLDESETYQPPEVLTKFIEQARKDGKKVVYIGFGSIVVS FT KPSELTQAVVDAVLEADVRCILNKGWSDRLGTKTEIEVVLPPEIYNAGSVPHDWLFPQI FT DAAVHHGGSGTTGASLRFGVPTIIKPFFGDQKFYAGRVEDLGCGVSLKDLNYKSLARAL FT KEVTTNTRIIEKAKLVGARIRSETGVQTAIETIYNEMEYARSLSISKVKQVSVVKSDEE FT FDDDKDEEVEGSWLLV" XX SQ Sequence 3726 BP; 1029 A; 852 C; 972 G; 873 T; 0 other; atgtctggca tcgagtcgac tgaggagcct tgcgacagca tgacagagtc gcagagtctg 60 tcgcctttgg agcccgaaga gcggcagact cgcaaggatt ctggcttgca atcgcaaagc 120 cttaccaaac gacacttcgc cttctcgcct caccgactaa tcacatcgat atcgcgacat 180 acgtcgcctc acaagccacg accgaaatcc gaatcaaggg tgcccgtgcc gaaactgcat 240 tctctaccgc cacaacgcct ggctagccct gagagagata agccttccat agaaggcata 300 tccaaatcgt ttgtgagttt cctcactgca gccagcgtct acgctgggtt ccaggactta 360 gaaggagaag accaacaggt atcgcccgat gacgtttccg cgggcgagtc agaggaccag 420 caagctgacg aatcgtccga tgaacaggag gacgacgatc aggatgaccg tacattttac 480 gccacagacc cttcgcccac cgagctgacc attaatgaga atacgccatt gccagagcca 540 gagccaccgc gtcggaccct ccgcaaagcc agatcgcggt tcgagttctc tgtggtgaag 600 aggctctctg agaacgaaaa tgaccagctg gcgcagaaaa gagcgatcgc gctctcgaac 660 aagctgaaga gaacatttga catttccgat acagacgtct tcatcagtga ttatccgtgc 720 tggttgatgg gagacgttct gttgcagggc catctgtata tcaccaagca ccacatcttg 780 ttctttgcat ttttacccaa gaaacagggc tccatttcga aatcgggcgc gctgaccacg 840 aaatcgtatc cgtctcttcg agagcaccgc aaatgggctg tcctacgcaa caacaccttc 900 agcgtgtatt caaattcgac agatctgtat tttccgctac tggtgatcga tctccgaact 960 gctttgcgcg cagaaattct gcaaagcagt agcacgaagc agaatccaag taaaccggta 1020 tggattcgga tcataacaga gtcaagaacg cactggtttc ttgctgacaa tttggcttca 1080 gctagatcct gggtctcgag tctcaagaag cacattttcg cctcaaggaa caaaggcgat 1140 caggtggcga tcaagatccc tctgcagaac gtggttgacc tggagctgac ctctgtcatt 1200 ggggtgacca agaatttgag gatcaaggtc attgagagtg cagatacgtt tgccatagat 1260 gactactttc tgatgttctt ttcaagagga gaaaaggccg tggaggatat caagaaagtg 1320 attcacgatg cgggtatgga gatctcagag ggaacgagca cagaaagcga ggacgagcag 1380 ggtgtggaca acaaccttct gaaatccaag atcgagctac tgaaaaagtc tccgtcaatg 1440 gtgcagacct ccagtaagtc gaatgtcccc gttatccgaa tggacgagcc tgcggacgat 1500 ttcagccaag agcaagaatc tgcagaaagc tccaaacctg tatcggacga tgagattgtg 1560 tcggcagacg ataaccaaga gttggaggag aagcaaccac aggacaatct ggcaaacgcc 1620 gaaaaagaaa atcatgacaa agtttcaaga gctaacagtc gtcgtacgtg gtcgacaagg 1680 tcattagtgc aaggcctaac agctatcact cagggatgga tgtcgccctc tcccatggct 1740 catttcgatg agaaatacgc agttttgcga ggagaggagg attcatactt tgtcaaggat 1800 gcagagcagc gtaaagcagc tacagagcgg ttcagaaaac atttctctct cacggatggt 1860 gaaaagctta ttgccacata ccatgcatat ctggtcaagg ggattcctgc atacggtaag 1920 atatatcttg ggtccaatga gatgtgtttc cgttcgacgt tgcccggaac aggaacaata 1980 atgatcctcc ctttttcgga tatcgaaaac gtgaataagg agaaaggttt tcgatttgga 2040 tactctgggc tggttgtcgt cattcacgga catgaggaac tgtttttcga gtttgccagt 2100 gaccaagcgc gggacgattg tgagtttatg cttctgaagc aaatggatat gttcaagaaa 2160 ggaagcaccg atagcagtcc tccgaatgcg agcgaaggtt cgagcgatga gagttgcaat 2220 ttagcagagt ccaatacaag tttagcatct gccagattga ggatgttcga aaatcgaatc 2280 catgatgcaa ttggcctgga cgtgccgatc atcatagaag agcatccatt gaccaaaacc 2340 aaagttaggc cgttgaaatc ttacagattc acgctgttga cgattggatc cagaggagac 2400 gttcagcctt atattgcatt gggaaaggcc ttgatgaaag agggccacca ggttcgcatt 2460 gtcacgcatg ccgagttcga gccttggatc aagaaacatg gtattaggtt tgcatcgata 2520 gcgggagatc catctgaact catggcattg atggtcaccc atccaaccat aaattacaac 2580 tttataaagg aggccaagtc aaagttccgg agctggatcg atgacctgtt ggtcacatca 2640 tggaaagcct gtcaggacac agatattctg atcgagtctc cgtcgtcaat atgtggtatt 2700 cacattgctg agaagctgca aattccttac ttccgtgctt ttaccatgcc gtggacacgt 2760 acgagagcgt atcctcacgc cttcatggtt cccgatcaga aactgggcgg cgcatacaac 2820 tatatgaccc atgtggcttt cgaaaatgga tactggcgag gaaccgctca tcaggtgaat 2880 aaatggcgtg ttgaaacgtt agggctgcct aaaacgtctc tagcagagat gaaacagaat 2940 aacgttcctt tcctttataa cgtttcgcca accgtctttc ctccttctgt ggattttgct 3000 gagtgggtca aagttaccgg ttactggttt ttggatgaaa gcgagacgta ccagccaccc 3060 gaggttctga ctaagttcat cgagcaggcg agaaaagacg ggaaaaaggt ggtttacatt 3120 ggatttgggt ccatcgtcgt ttccaagcct tcagaactca cccaagcggt tgtggacgct 3180 gttcttgagg ccgatgtcag gtgcattctg aataaagggt ggtcagatcg tctgggaacg 3240 aagaccgaaa ttgaggtggt gcttccacct gaaatatata atgctggaag cgtgccccat 3300 gattggctat ttcctcagat cgatgctgct gttcatcacg gaggctctgg aacgacagga 3360 gcttcgttgc ggttcggggt gccgacaatc atcaagccgt tttttggaga ccagaagttt 3420 tatgcaggaa gagtcgaaga ccttggatgt ggtgttagtc tgaaagattt gaactataag 3480 agtctggcga gggctctcaa ggaggtgacc accaacacaa ggattatcga aaaggctaaa 3540 cttgtgggag cgagaatccg gtccgaaaca ggcgttcaaa ctgccattga aacaatttac 3600 aacgaaatgg agtacgctcg gagtttatca atcagcaagg tgaaacaagt ttctgttgta 3660 aagagcgacg aggagtttga tgacgataaa gacgaggaag ttgaaggctc gtggttactg 3720 gtttga 3726 // |
|