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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EF032996; SV 1; linear; genomic DNA; STD; VRT; 864 BP.
XX
AC   EF032996;
XX
DT   29-MAR-2007 (Rel. 91, Created)
DT   29-MAR-2007 (Rel. 91, Last updated, Version 1)
XX
DE   Lycodes terraenovae glycosyltransferase (glyt) gene, partial cds.
XX
KW   .
XX
OS   Lycodes terraenovae
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Zoarcoidei;
OC   Zoarcidae; Lycodinae; Lycodes.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-864
RX   DOI; 10.1186/1471-2148-7-44
RX   PUBMED; 17374158.
RA   Li C., Orti G., Zhang G., Lu G.;
RT   "A practical approach to phylogenomics: the phylogeny of ray-finned fish
RT   (Actinopterygii) as a case study";
RL   BMC Evol. Biol. 7:44-44(2007).
XX
RN   [2]
RP   1-864
RA   Li C., Orti G., Zhang G., Lu G.;
RT   ;
RL   Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, University of Nebraska, 348 Manter, Lincoln,
RL   NE 68588-0118, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Lycodes terraenovae"
FT                   /mol_type="genomic DNA"
FT                   /specimen_voucher="KUNMH 5356"
FT                   /db_xref="taxon:215415"
FT   gene            <1..>864
FT                   /gene="glyt"
FT   mRNA            <1..>864
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT                   /db_xref="GOA:A4KUQ2"
FT                   /db_xref="UniProtKB/TrEMBL:A4KUQ2"
FT                   /protein_id="ABO28381.1"
FT                   /translation="VPKANMLVSGNEIRQFARALMEKMNITTNVEKEKDGGSAEDEKER
FT                   KDDYVVVFSRSTTRLILNEAELIMALAQEFQMRVVTVSLEEQPFPSIVQVISGASVLVS
FT                   MHGAQLITSLFLPRGAAVVELFPFAVNPEQYTPYKTLATLPGMDLHYISWRNTKEENTI
FT                   THPDRPWEQGGIAHLEKEEQERILESRDVPRHLCCRNPEWLFRIYQDTLVDIPSFLEAL
FT                   KEGMKTKPSVRKSKPASTVHPGRVRQPQCQTSVQTTNEAKLTVSWQIPWNLKYLKVREV
FT                   KYEVWIQ"
XX
SQ   Sequence 864 BP; 232 A; 227 C; 245 G; 160 T; 0 other;
     gtgcccaagg ccaacatgtt ggtctcagga aatgagatca gacagtttgc gagggctctg        60
     atggagaaaa tgaacatcac aacaaatgtg gagaaggaga aggatggagg gagtgccgaa       120
     gatgagaaag agagaaagga tgattacgtc gtcgtgttca gtcgctcaac aacaaggctg       180
     atactgaatg aggcggagct aatcatggcg ctggcccagg agttccagat gagagtggtc       240
     acagtgtccc tagaggaaca gcctttcccc agtatcgtcc aggtgatcag cggcgcttct       300
     gtgttggtca gtatgcatgg cgctcagctc attacctcac tcttcctccc cagaggagct       360
     gctgtggtgg agctgttccc ctttgctgtg aacccagagc agtacacccc gtataaaacc       420
     ctcgccaccc ttccaggcat ggaccttcac tatatctcct ggcggaacac taaggaggag       480
     aacaccatca cccacccaga cagaccctgg gagcaagggg gcatcgctca cttggagaag       540
     gaggagcagg agcgtatact ggagagcaga gatgtcccca ggcacctgtg ctgccgcaac       600
     ccagagtggc tcttccgaat ctaccaggac actttggtgg acatcccttc cttcctggaa       660
     gcccttaaag agggcatgaa gacaaagccc agcgtgagga agtcaaagcc ggccagcaca       720
     gtccacccgg gccgggtcag acaaccccag tgtcagacct cggtacaaac caccaacgag       780
     gctaaactca cagtctcctg gcagatcccg tggaatctga aatacttgaa ggtgagagag       840
     gtgaagtacg aagtgtggat ccag                                              864
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