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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EF032994; SV 1; linear; genomic DNA; STD; VRT; 828 BP.
XX
AC   EF032994;
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DT   29-MAR-2007 (Rel. 91, Created)
DT   29-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Ictalurus punctatus glycosyltransferase (glyt) gene, partial cds.
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KW   .
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OS   Ictalurus punctatus (channel catfish)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC   Ictaluridae; Ictalurus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-828
RX   DOI; 10.1186/1471-2148-7-44
RX   PUBMED; 17374158.
RA   Li C., Orti G., Zhang G., Lu G.;
RT   "A practical approach to phylogenomics: the phylogeny of ray-finned fish
RT   (Actinopterygii) as a case study";
RL   BMC Evol. Biol. 7:44-44(2007).
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RN   [2]
RP   1-828
RA   Li C., Orti G., Zhang G., Lu G.;
RT   ;
RL   Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, University of Nebraska, 348 Manter, Lincoln,
RL   NE 68588-0118, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..828
FT                   /organism="Ictalurus punctatus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:7998"
FT   gene            <1..>828
FT                   /gene="glyt"
FT   mRNA            <1..>828
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT   CDS             <1..>828
FT                   /codon_start=1
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT                   /db_xref="GOA:A4KUQ0"
FT                   /db_xref="UniProtKB/TrEMBL:A4KUQ0"
FT                   /protein_id="ABO28379.1"
FT                   /translation="GPKANILVSGNEIRQFASFIMDRLNITTKERPEGDDYIVVFSRTS
FT                   NRLILNEAELLLSLAQEYKMRTVTVSLEEQTFASIVQLISAASMLVSMHGAQLITSMFL
FT                   PRGAAVIELFPYAVNPEQYTPYKTLASLPGMDLQYIAWRNTIEENSVAYPDRPWDQGGI
FT                   THLEKEEQERILASKEVQRHLCCRNPEWLFRIYQDTIVDIPSFLEVLRDGLKIKPNLKK
FT                   SKPVSVVHPGRVRHPKCQTSVQAAHEAKLSVSWQIPWNLKYLKVREVKYEVWIQ"
XX
SQ   Sequence 828 BP; 235 A; 193 C; 199 G; 201 T; 0 other;
     gggcccaaag ctaacatact ggtgtctggg aatgagattc gtcagtttgc ctcgttcata        60
     atggacagac ttaatatcac aacaaaggag aggcctgaag gtgatgatta tatagtagtt       120
     tttagtagaa cttctaacag gttgatactc aatgaggcag agttgcttct ttctttggct       180
     caagagtaca aaatgaggac agtcaccgtg tccttggagg agcaaacttt cgcaagcata       240
     gtccagctta tcagtgcggc atccatgctg gtcagcatgc atggtgctca actgatcacg       300
     tccatgttcc taccacgagg ggctgctgtc atcgagcttt ttccatacgc tgtcaaccca       360
     gaacagtata ctccatataa aactctggcc tccttgccag gaatggacct gcagtacata       420
     gcatggagaa acaccattga agagaattct gtagcctatc ctgaccgccc ctgggaccaa       480
     ggaggtatca ctcacctgga gaaagaggaa caggaacgta tcctagctag caaggaggta       540
     cagagacacc tctgctgtcg caacccagag tggcttttcc ggatttatca agacaccatt       600
     gtggacattc cttccttctt ggaagtcctt cgagacggtc taaaaattaa gcctaatctg       660
     aaaaagagca aacctgtcag tgtagtacat cctggtcgag tcagacatcc caagtgccag       720
     acatcagtgc aggctgccca tgaagcaaag ctgtccgtgt cctggcagat tccttggaac       780
     ctcaagtact tgaaggtaag agaggtaaaa tatgaagtgt ggatccag                    828
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