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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EF032993; SV 1; linear; genomic DNA; STD; VRT; 870 BP.
XX
AC   EF032993;
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DT   29-MAR-2007 (Rel. 91, Created)
DT   29-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Oreochromis niloticus glycosyltransferase (glyt) gene, partial cds.
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KW   .
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OS   Oreochromis niloticus (Nile tilapia)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Perciformes; Labroidei;
OC   Cichlidae; African cichlids; Pseudocrenilabrinae; Tilapiini; Oreochromis.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-870
RX   DOI; 10.1186/1471-2148-7-44
RX   PUBMED; 17374158.
RA   Li C., Orti G., Zhang G., Lu G.;
RT   "A practical approach to phylogenomics: the phylogeny of ray-finned fish
RT   (Actinopterygii) as a case study";
RL   BMC Evol. Biol. 7:44-44(2007).
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RN   [2]
RP   1-870
RA   Li C., Orti G., Zhang G., Lu G.;
RT   ;
RL   Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, University of Nebraska, 348 Manter, Lincoln,
RL   NE 68588-0118, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..870
FT                   /organism="Oreochromis niloticus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:8128"
FT   gene            <1..>870
FT                   /gene="glyt"
FT   mRNA            <1..>870
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT   CDS             <1..>870
FT                   /codon_start=1
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT                   /db_xref="GOA:A4KUP9"
FT                   /db_xref="UniProtKB/TrEMBL:A4KUP9"
FT                   /protein_id="ABO28378.1"
FT                   /translation="GPKANILVSGNEIRQFARALMDKMNITRVEEMEKEGGSAEDEKEK
FT                   EKKDDYIVVFSRSTTRLILNEAELIMALAQEFQMRVVTVSLEEQSFPSIVEVISGASML
FT                   VSMHGAQLITSLFLPRGAAVVELFPFAVNPEQYTPYKTLASLPGMDLHYISWRNTKEEN
FT                   TVTHPDRSWEQGGIAHLDKEEQDRIQASKEVPRHLCCRNPEWLFRIYQDTLVDIPSFLE
FT                   VLKEGMKTKPSLKKAKVASMVHPGRVREPKCQTSVQTTNEAKLTVSWQIPWNLKFLKVR
FT                   EVKYEVWIQ"
XX
SQ   Sequence 870 BP; 250 A; 204 C; 233 G; 183 T; 0 other;
     gggcccaaag ctaacatctt ggtctcaggc aatgagatca ggcagtttgc cagagctctg        60
     atggacaaaa tgaacattac aagggtagag gagatggaga aggagggagg aagcgctgag       120
     gatgagaagg agaaagagaa gaaggatgac tacattgtcg ttttcagtcg gtcaacaaca       180
     agactgatac tgaatgaagc agagctaatc atggcgctgg cccaagagtt tcagatgaga       240
     gtggtcacag tgtccttgga agagcagtct tttcccagta ttgtagaggt catcagcggc       300
     gcttccatgt tggtcagcat gcatggagct cagcttatta cctcactctt cctccctaga       360
     ggtgctgctg tggtggagct gttccctttt gctgtgaacc cagagcagta tacaccatat       420
     aaaactcttg cctcccttcc aggcatggac cttcactaca tctcctggag gaacactaag       480
     gaggagaata ctgtcaccca cccagacaga tcctgggaac aaggaggcat tgctcacttg       540
     gacaaagagg agcaggatcg gatccaggca agcaaggaag tccccaggca cctttgctgc       600
     cgcaacccag agtggctctt ccggatctat caggacactt tagtggacat cccgtccttc       660
     ctggaagtcc tcaaagaagg catgaagacc aagcccagct taaaaaaggc caaggtggcc       720
     agcatggtcc atccgggccg ggtcagagaa cctaaatgtc aaacttcagt acaaaccact       780
     aatgaggcta aactcacagt ctcttggcag atcccatgga atttgaaatt cctaaaagtg       840
     agagaggtga agtacgaggt gtggatccag                                        870
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