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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EF032990; SV 1; linear; genomic DNA; STD; VRT; 864 BP.
XX
AC   EF032990;
XX
DT   29-MAR-2007 (Rel. 91, Created)
DT   29-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Gasterosteus aculeatus glycosyltransferase (glyt) gene, partial cds.
XX
KW   .
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OS   Gasterosteus aculeatus (three-spined stickleback)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Gasterosteiformes;
OC   Gasterosteidae; Gasterosteus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-864
RX   DOI; 10.1186/1471-2148-7-44
RX   PUBMED; 17374158.
RA   Li C., Orti G., Zhang G., Lu G.;
RT   "A practical approach to phylogenomics: the phylogeny of ray-finned fish
RT   (Actinopterygii) as a case study";
RL   BMC Evol. Biol. 7:44-44(2007).
XX
RN   [2]
RP   1-864
RA   Li C., Orti G., Zhang G., Lu G.;
RT   ;
RL   Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, University of Nebraska, 348 Manter, Lincoln,
RL   NE 68588-0118, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Gasterosteus aculeatus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:69293"
FT   gene            <1..>864
FT                   /gene="glyt"
FT   mRNA            <1..>864
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT                   /db_xref="GOA:A4KUP6"
FT                   /db_xref="UniProtKB/TrEMBL:A4KUP6"
FT                   /protein_id="ABO28375.1"
FT                   /translation="GPKANMLVSGNEIRQFATALMEKMNITRVEEVEKDRGSAEDEKER
FT                   KDDYVVVFSRSATRLILNEAELILALAQEFQMRVVTVSLEDQSFPGIVQVISGASALVS
FT                   MHGAQLIASLFLPRGATVVELFPFAVNPEQYTPYKTLATLPGMDLHYISWRNTKEENTI
FT                   HHPDRPWEQGGIAHLEKEEQERILASRDVPRHLCCRNPEWLFRIYQDTLVDIPYFLETL
FT                   REGMKTKPSGKKSKPASTVHPGRVREPQCQTSVQTTNEAKLTVSWQIPWNLKYLKVREV
FT                   KYEVWIQ"
XX
SQ   Sequence 864 BP; 213 A; 234 C; 268 G; 149 T; 0 other;
     gggcccaagg ccaacatgct ggtctctgga aatgagatcc gacagtttgc gacggctctg        60
     atggagaaaa tgaacatcac gagggtggag gaggtggaga aggatagagg tagtgccgag       120
     gatgagaagg agaggaagga tgattacgtc gtcgtgttca gtcgctcggc aacgaggctg       180
     atactgaacg aagctgagct aatcctggcg ctggcccagg agttccagat gagagtggtc       240
     acggtgtccc tggaggatca gtccttcccc ggtatcgtcc aggtgatcag cggcgcctcc       300
     gcgttggtca gtatgcacgg cgctcagctc atcgcgtcgc tcttcctccc cagaggggcg       360
     accgtggtgg agctgttccc ctttgctgtg aacccagaac agtacacccc gtataaaacc       420
     ctggccaccc ttccgggaat ggaccttcac tatatctcct ggaggaacac taaggaggag       480
     aacaccatcc accacccaga cagaccctgg gagcaggggg gcatcgctca cttggagaag       540
     gaggagcaag agcgcatact ggcgagccga gacgtcccca ggcacctgtg ctgccgcaac       600
     ccagagtggc tcttccggat ctaccaggac acgttggtgg acatccccta cttcctggag       660
     acccttagag agggcatgaa gacaaagccc agcgggaaga agtcaaagcc ggccagcaca       720
     gtccacccgg gccgggtgag ggagccgcag tgtcagacct cggtacaaac caccaacgag       780
     gctaaactca cagtttcctg gcagatccca tggaatctga aatacctaaa ggtgagagag       840
     gtgaagtacg aggtgtggat ccag                                              864
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