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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   EF032987; SV 1; linear; genomic DNA; STD; VRT; 828 BP.
XX
AC   EF032987;
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DT   29-MAR-2007 (Rel. 91, Created)
DT   29-MAR-2007 (Rel. 91, Last updated, Version 1)
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DE   Amia calva glycosyltransferase (glyt) gene, partial cds.
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KW   .
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OS   Amia calva (bowfin)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Amiiformes; Amiidae; Amia.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-828
RX   DOI; 10.1186/1471-2148-7-44
RX   PUBMED; 17374158.
RA   Li C., Orti G., Zhang G., Lu G.;
RT   "A practical approach to phylogenomics: the phylogeny of ray-finned fish
RT   (Actinopterygii) as a case study";
RL   BMC Evol. Biol. 7:44-44(2007).
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RN   [2]
RP   1-828
RA   Li C., Orti G., Zhang G., Lu G.;
RT   ;
RL   Submitted (03-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   School of Biological Sciences, University of Nebraska, 348 Manter, Lincoln,
RL   NE 68588-0118, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1..828
FT                   /organism="Amia calva"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:7924"
FT   gene            <1..>828
FT                   /gene="glyt"
FT   mRNA            <1..>828
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT   CDS             <1..>828
FT                   /codon_start=1
FT                   /gene="glyt"
FT                   /product="glycosyltransferase"
FT                   /db_xref="GOA:A4KUP3"
FT                   /db_xref="UniProtKB/TrEMBL:A4KUP3"
FT                   /protein_id="ABO28372.1"
FT                   /translation="GPKAIILVSGTEVRKFTRFLMAKLNITKEESPEPEEYIVVFSRSI
FT                   NRLILNEAELILALAQEFQMKTITVSLDEHSFADIVQIISKASMLVSMHGAQLVTSLFL
FT                   PRGAIVVELFPYAVNPEHYTPYKTIASLPGMDLQYVAWQNTKEENSIAFPDRPWDQGGI
FT                   AHLEKEEQDRILKSKEVPRHLCCRNPEWLFRIYQDTSVDIPSLLEVLRQTVKSKPNLKK
FT                   FKPASTIHPGKVREPKCQASVQGTNEAKLTVSWQIPWNLKYLKVREVKYEVWIQ"
XX
SQ   Sequence 828 BP; 225 A; 205 C; 212 G; 186 T; 0 other;
     ggccccaaag ccatcatatt ggtgtcagga acggaagtcc gtaagttcac acgctttctg        60
     atggctaaac tcaacataac caaggaggag agccctgaac ctgaggagta cattgtggtc       120
     tttagccgta gcatcaacag gctcatcctt aatgaagccg aactaatttt ggctctggct       180
     caggagtttc agatgaagac gatcacggtg tctttagatg agcactcctt cgcagatatc       240
     gtacaaataa tcagtaaggc gtcaatgctt gtcagtatgc acggggctca gctggtgacc       300
     tcactcttcc tgccccgcgg cgctatagtg gtagagcttt tcccatatgc tgtgaaccct       360
     gagcactaca cgccctacaa aactatagcc tccttgcctg gcatggatct tcagtatgtg       420
     gcctggcaaa acaccaaaga agagaactcc attgcgttcc cagacaggcc ctgggatcaa       480
     ggcggaatag cccatctaga aaaggaggag caggatcgca tcttaaaaag caaggaggtg       540
     cctcggcact tgtgttgccg taacccggag tggcttttcc gcatttacca ggacactagt       600
     gtggacatcc cctctcttct tgaagtactg aggcagacgg tgaagtctaa gcccaatctg       660
     aaaaagttta agccggccag cacaattcac cccggtaaag tgcgggaacc caaatgccag       720
     gcttctgtac aaggaaccaa cgaggcgaag ctgacagtgt cgtggcagat cccttggaat       780
     ctgaagtatt tgaaagtcag ggaggtcaag tatgaagtgt ggatacag                    828
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