EBI Dbfetch

ID   DQ841573; SV 1; linear; mRNA; STD; MAM; 990 BP.
XX
AC   DQ841573;
XX
DT   13-AUG-2006 (Rel. 88, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE   Sus scrofa zeta-crystallin (CRYZ) mRNA, complete cds.
XX
KW   .
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-990
RA   Ibrahim H.M., Curthoys N.P.;
RT   "Sus scrofa renal zeta-crystallin (NADPH quinone reductase) cDNA";
RL   Unpublished.
XX
RN   [2]
RP   1-990
RA   Ibrahim H.M., Curthoys N.P.;
RT   ;
RL   Submitted (10-JUL-2006) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry and Molecular Biology, Colorado State University, 1870 Campus
RL   Delivery, Fort Collins, CO 80523-1870, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..990
FT                   /organism="Sus scrofa"
FT                   /mol_type="mRNA"
FT                   /cell_line="LLCPK1-F+"
FT                   /tissue_type="kidney"
FT                   /PCR_primers="fwd_seq: atggcnactggncagaagttgatgagngc,
FT                   rev_seq: tcataagagnagaatcattttncc"
FT                   /db_xref="taxon:9823"
FT   gene            1..990
FT                   /gene="CRYZ"
FT   CDS             1..990
FT                   /codon_start=1
FT                   /gene="CRYZ"
FT                   /product="zeta-crystallin"
FT                   /note="NADPH quinone reductase"
FT                   /db_xref="GOA:Q0MVN8"
FT                   /db_xref="InterPro:IPR002364"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q0MVN8"
FT                   /protein_id="ABH10011.1"
FT                   /translation="MATGQKLMSAIRVFKFGGPEVMKLQSDVAIPIPKDNQVLIKVHAC
FT                   GVNPVDTYIRSGTHNMKPLLPYTPGLDVAGIVEAVGEHVSSFKKGDRVFTVSTLSGGYA
FT                   EYALAADDTVYMLPEKLDFKQGAAIGIPYFTACLALLHSACVKAGEIVLIHGASGGVGI
FT                   AACQIARAYGLKVLGTAGTEEGQNIVLQNGAHEVFNHREVNYIDKIKKSVGEKGIDVII
FT                   EMLANVNLSNDLNLLSHGGRVIIVGSRGPIEINPRDTMTKGSSIKGVALYSSTKEEFQQ
FT                   LAAALQAGMEVGWLRPVIGPVYPLEKAAQAHEDIIHSRGATGKMILLL"
FT   misc_difference 156
FT                   /gene="CRYZ"
FT                   /compare=DQ499448.1
FT   misc_difference 312
FT                   /gene="CRYZ"
FT                   /compare=DQ499448.1
FT   misc_difference 561
FT                   /gene="CRYZ"
FT                   /replace="c"
FT                   /compare=DQ499448.1
XX
SQ   Sequence 990 BP; 283 A; 183 C; 251 G; 273 T; 0 other;
     atggcgactg ggcagaagtt gatgagcgct attagagttt ttaaatttgg tggaccagaa        60
     gtgatgaaac tccagtcgga tgttgccata ccaattccaa aggacaatca ggttctaatc       120
     aaagtccacg catgtggtgt caacccagtg gacacgtata ttcgctctgg tactcacaat       180
     atgaaaccac ttctacccta tactcctggt ttagatgtgg ctggaatagt agaagctgtc       240
     ggagagcatg tatcttcttt caagaaaggt gacagagttt tcacagtcag cactctctcc       300
     gggggctacg cagagtatgc tttagcagcc gacgacactg tttacatgct gccagaaaaa       360
     ctggacttta aacaaggagc tgccattggg atcccatatt ttactgcttg tcttgctctg       420
     ctccacagtg cctgtgtgaa agctggagaa attgttctga ttcatggggc tagtggaggg       480
     gttggaatag cagcgtgcca aattgctaga gcttatggct taaaggtttt gggcacagct       540
     ggtactgagg aaggacaaaa tattgttttg caaaatggag cccatgaagt gtttaatcac       600
     agagaagtta attatattga caaaattaag aaatctgttg gtgaaaaagg aattgatgtg       660
     attattgaaa tgttagctaa tgtaaatctt agcaatgatt tgaatctttt gtcacatgga       720
     ggacgagtaa taattgttgg ctccagaggt cctattgaaa taaaccctcg ggacactatg       780
     acaaagggat ctagcataaa aggagttgct ctctattcat caaccaagga ggaatttcag       840
     cagttggcag cagcccttca agctggaatg gaagttggtt ggttgagacc tgtgataggt       900
     cctgtgtatc cactggagaa ggcggcccag gctcatgaag acatcattca cagccgtggg       960
     gctactggga aaatgattct tctcttatga                                        990
//