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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   DQ535181; SV 1; linear; mRNA; STD; VRT; 1602 BP.
XX
AC   DQ535181;
XX
DT   13-JUN-2006 (Rel. 88, Created)
DT   11-MAR-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Oryzias latipes betaine aldehyde dehydrogenase (Aldh9A1) mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Oryzias latipes (Japanese medaka)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC   Acanthomorpha; Acanthopterygii; Percomorpha; Atherinomorpha; Beloniformes;
OC   Adrianichthyidae; Oryziinae; Oryzias.
XX
RN   [1]
RP   1-1602
RX   DOI; 10.1016/j.cbpb.2006.11.006
RX   PUBMED; 17236798.
RA   Wang X., Zhu S., Khan I.A., Dasmahapatra A.K.;
RT   "Ethanol attenuates Aldh9 mRNA expression in Japanese medaka (Oryzias
RT   latipes) embryogenesis";
RL   Comp. Biochem. Physiol. B, Biochem. Mol. Biol. 146(3):357-363(2007).
XX
RN   [2]
RP   1-1602
RA   Wang X., Khan I.A., Dasmahapatra A.K.;
RT   ;
RL   Submitted (09-MAY-2006) to the EMBL/GenBank/DDBJ databases.
RL   National Center for Natural Product Research, University of Mississippi,
RL   P.O. Box 1848, University, MS 38677, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1602
FT                   /organism="Oryzias latipes"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:8090"
FT   gene            1..1602
FT                   /gene="Aldh9A1"
FT   CDS             20..1537
FT                   /codon_start=1
FT                   /gene="Aldh9A1"
FT                   /product="betaine aldehyde dehydrogenase"
FT                   /note="ALDH9"
FT                   /db_xref="GOA:Q19A30"
FT                   /db_xref="InterPro:IPR015590"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q19A30"
FT                   /protein_id="ABF83193.1"
FT                   /translation="MSLATLDSMGGASTGSVTVTEQLNFWAGRRVGGRNSEHAEPVFEP
FT                   ATGRVLCQMVPCGAEEVDEAIMSAHAAYVQWSKKSGTERARVMLEAARIIRERREKIAK
FT                   LEVINNGKSITEALVDIDVAWQCIEYYAGVAGTLAGQHFQLPGGAFAYTRREPLGVCVG
FT                   IGAWNYPFQIAACKSAPALACGNAMVFKPSPFTPVTAVILAEIYKEAGVPDGLFCVVQG
FT                   GAETGSLLCNHPKVAKVSFTGSVPTGKKVMEMSAKGVKQVTLELGGKSPLIIFKDCDLE
FT                   NAVKGALMANFLTQGQVCCNGTRVFVHKDILPQFLEEVVKRTKAIAVGDPLLDSTRMGA
FT                   LITKPHLEKVLGFVRQAKKEGGRVLCGGEPFVPSDPKLKGGYFMSPCILDNCRDDMTCV
FT                   KEEIFGPVMSVLPFDTEEEVIRRANNTTFGLASGVFTRDISRAHRVAASLEAGTCFINN
FT                   YNISPVEVPFGGYKMSGFGRENGQVTIEYYSQLKTVVVETGDVENYF"
XX
SQ   Sequence 1602 BP; 364 A; 400 C; 510 G; 328 T; 0 other;
     tgcttgcatc ccgaacgaca tgtcgctggc tactctggac tcaatgggcg gagcctccac        60
     gggatccgtg acggtgaccg agcagctcaa cttttgggcc gggaggcgcg tggggggtcg       120
     gaacagcgag catgcagagc cggtgttcga gcctgccaca ggtcgagtcc tgtgccagat       180
     ggtgccctgt ggagccgagg aggtggatga agccataatg agcgctcacg ctgcctacgt       240
     gcagtggagc aagaagtctg gcacggagag ggcccgggtc atgctggagg cagcccgcat       300
     catcagggaa cgaagggaga agattgcaaa gctggaagtg atcaacaatg gcaagtccat       360
     cactgaagcc ctggtggaca tcgacgttgc ctggcagtgc attgagtact acgctggtgt       420
     ggctggtact cttgcaggtc agcacttcca gctgcctggg ggggcctttg cttacactag       480
     gagggagccc cttggtgtgt gtgtgggaat tggtgcgtgg aactacccct tccagattgc       540
     agcttgcaag tccgctccgg ctctggcgtg cggaaacgcc atggtgttca agccgtctcc       600
     ctttacgcct gtgaccgccg tcatactggc agagatctac aaagaggcgg gggtccctga       660
     tgggctcttc tgtgtcgtcc agggaggagc agagacgggc tcactgctgt gcaatcaccc       720
     gaaggttgcc aaagtctcct tcaccgggag cgttccaacg gggaaaaagg tcatggagat       780
     gtccgccaag ggagtgaagc aggtgaccct ggagcttgga ggaaagtcac cgctgatcat       840
     cttcaaagac tgtgatctgg agaatgcagt gaagggggca ctcatggcaa acttcctcac       900
     acaggggcag gtttgctgca atgggaccag agtgtttgtg cataaggaca tcctgccaca       960
     gttccttgag gaggtggtta agaggaccaa agccatcgcc gtaggtgacc cgctcctcga      1020
     cagcacccgc atgggggcgc tgatcaccaa gccccacctg gagaaggtgc tagggttcgt      1080
     ccgtcaggcc aagaaggagg ggggccgtgt gctttgtgga ggagagcctt ttgtcccaag      1140
     tgatcccaag ctgaaggggg gttacttcat gtctccctgc attctcgaca actgcagaga      1200
     cgacatgacc tgcgtgaagg aggagatctt cggcccggtc atgtctgtcc tgccgttcga      1260
     caccgaagag gaggtgatcc ggcgggccaa caacaccacc tttggactgg cctctggggt      1320
     tttcaccaga gacatttctc gagctcatcg tgtggctgca agtctggagg cggggacctg      1380
     cttcatcaac aattacaaca tcagcccagt ggaggtgcca tttggagggt ataagatgtc      1440
     aggctttggc agagagaatg gccaggtgac catcgagtac tactcccagc tgaagacggt      1500
     ggtggtggaa acaggcgatg tggaaaacta cttctagagt ttccgtttta cacttatttc      1560
     agagcaataa acaaaactgt gcagaacaga ataaaaaaaa aa                         1602
//
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