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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   DQ492199; SV 1; linear; mRNA; STD; PLN; 1350 BP.
XX
AC   DQ492199;
XX
DT   23-MAY-2006 (Rel. 87, Created)
DT   23-MAY-2006 (Rel. 87, Last updated, Version 1)
XX
DE   Arabidopsis thaliana clone 0000020410_0000014218 unknown protein mRNA,
DE   complete cds.
XX
KW   .
XX
OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
XX
RN   [1]
RP   1-1350
RA   Underwood B.A., Xiao Y., Moskal W., Monaghan E., Wang W., Redman J.,
RA   Wu H.C., Utterback T., Town C.D.;
RT   ;
RL   Submitted (13-APR-2006) to the EMBL/GenBank/DDBJ databases.
RL   Plant Genomics, The Institute for Genomic Research, 9712 Medical Center
RL   Drive, Rockville, MD 20850, USA
XX
CC   This clone is in the Gateway(TM) pENTR221 recombination vector and
CC   has been donated to the Arabidopsis Biological Resource Center. The
CC   cloned open reading frame is based on experimental evidence from 5'
CC   and 3' RACE products. ORFs that were experimentally verified to be
CC   contained in one exon were cloned by PCR from genomic DNA. ORFs
CC   that spanned more than one exon were cloned by PCR from cDNA pools.
CC   Shine-Dalgarno and Kozak consensus sequences for protein expression
CC   are included between the attL1 site and the start codon. Locus
CC   assignment based on TIGR Annotation 01-21-2004.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1350
FT                   /organism="Arabidopsis thaliana"
FT                   /ecotype="Columbia"
FT                   /mol_type="mRNA"
FT                   /clone="0000020410_0000014218"
FT                   /db_xref="taxon:3702"
FT   CDS             1..1350
FT                   /codon_start=1
FT                   /product="unknown protein"
FT                   /note="between At1g02140 and At1g02150"
FT                   /db_xref="GOA:Q1G329"
FT                   /db_xref="InterPro:IPR005599"
FT                   /db_xref="UniProtKB/TrEMBL:Q1G329"
FT                   /protein_id="ABF59128.1"
FT                   /translation="MHDILYHRHHLDSYDHLEFPGVVPRTFIVSVFASPVVSIISCLGF
FT                   PKVYSLVAARLVLGCIILSTLRFFRIQIKKKFGNQVETFFVLFTSLQFHFLFYCTRPLP
FT                   NILALGLVNLAYGNWLKGNFYPALSFLIFATVIFRCDTMLLLGPIGLELLLTKSISFWK
FT                   ALKYCVGTALLAVGLTIFVDSIMWKKFVWPEFEVFWFNSILNRSSDWGTHSIHWYFTSA
FT                   LPRSLLVAYPLSLLGTLVDRRVPFFIVPVLSFVILYSKLPHKELRFIISSVPMFNLSAA
FT                   VAASRIYNNRKKTIWKLVNMVMLAFFAISAGCTVVTFMASYYNYPSGYALKRLHQIGHP
FT                   ANVAGEEWVHIDTFGAMNGISRFCEDDFPWRYSKEEEIVVEELRNRNFTYLVNEHSSVD
FT                   GYKCLFYEEGFERLELRRGFPPIVLVKKAKVYLHREMKKEDPFHKKWPGC"
XX
SQ   Sequence 1350 BP; 332 A; 267 C; 288 G; 463 T; 0 other;
     atgcacgaca ttctttacca tcgccatcat ttggactctt atgatcattt ggagttcccc        60
     ggtgttgtcc ctcgaacttt tattgtctct gtttttgcat cacctgttgt atcaattatc       120
     agctgccttg gcttccccaa ggtttatagc cttgttgcag ctcgtttggt gttgggctgc       180
     atcatattgt ccacactaag atttttccgg attcagataa aaaaaaagtt tggaaatcaa       240
     gtggaaactt tctttgtact tttcaccagt cttcagtttc attttctttt ctactgcact       300
     cgtcctcttc ctaatattct agctttggga ttagtcaatc tggcatatgg taattggtta       360
     aagggaaatt tttatccagc tttgagtttc ctgatttttg ccactgtaat cttcagatgc       420
     gatacgatgt tactgcttgg gcctattggt cttgaacttt tattgaccaa atcgatctcc       480
     ttctggaaag cacttaagta ttgtgttgga accgctctgt tggccgtagg tcttaccatt       540
     ttcgttgact ctatcatgtg gaagaagttt gtctggccag aatttgaagt tttctggttt       600
     aactccattc taaaccggag ttctgattgg ggtacacatt ccatacattg gtacttcacc       660
     tcagcactcc cacggtcttt acttgtagct tatccacttt cattgcttgg tactttagtt       720
     gacagaaggg ttccattctt tatagttcca gttttatcgt tcgttatact atactctaaa       780
     cttccacaca aggaactccg atttatcatt agttcagtgc caatgttcaa cttgtctgct       840
     gcagttgctg ctagcagaat ctacaataat aggaagaaaa cgatttggaa actggtgaat       900
     atggttatgc tagcgttttt tgcaatcagt gcagggtgca cggttgtaac attcatggca       960
     tcttactaca attatcctag cggctatgct ttaaagcgct tgcatcagat tggccatcct      1020
     gcaaatgtag ctggggaaga gtgggttcac atagacactt ttggtgcgat gaatggaata      1080
     tctcgctttt gtgaagatga ttttccgtgg agatattcca aagaagaaga gatagtagtg      1140
     gaggagttgc gaaaccgaaa tttcacgtac ctggtgaacg agcattcctc tgtagatgga      1200
     tacaagtgct tattttatga agaaggcttt gagagacttg agctgcggcg aggtttccct      1260
     cccattgtct tggtaaaaaa agccaaagta tacttgcacc gggagatgaa gaaggaagat      1320
     ccttttcata agaaatggcc tggatgttag                                       1350
//
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