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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   DQ451039; SV 1; linear; genomic DNA; STD; ROD; 505 BP.
XX
AC   DQ451039;
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DT   15-JAN-2007 (Rel. 90, Created)
DT   15-JAN-2007 (Rel. 90, Last updated, Version 1)
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DE   Myocastor coypus O-mannosyl N-acetylglucosaminyltransferase gene, partial
DE   cds.
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KW   .
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OS   Myocastor coypus (nutria)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Hystricognathi;
OC   Myocastoridae; Myocastor.
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RN   [1]
RP   1-505
RX   DOI; 10.1080/10635150601064806
RX   PUBMED; 17345675.
RA   Farwick A., Jordan U., Fuellen G., Huchon D., Catzeflis F., Brosius J.,
RA   Schmitz J.;
RT   "Automated scanning for phylogenetically informative transposed elements in
RT   rodents";
RL   Syst. Biol. 55(6):936-948(2006).
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RN   [2]
RP   1-505
RA   Farwick A., Jordan U., Fuellen G., Huchon D., Catzeflis F., Brosius J.,
RA   Schmitz J.;
RT   ;
RL   Submitted (16-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL   ZMBE, Institute of Experimental Pathology, Von Esmarch Strasse 56, Muenster
RL   48149, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1..505
FT                   /organism="Myocastor coypus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:10157"
FT   mRNA            join(<1..91,490..>505)
FT                   /product="O-mannosyl N-acetylglucosaminyltransferase"
FT   CDS             join(<1..91,490..>505)
FT                   /codon_start=2
FT                   /product="O-mannosyl N-acetylglucosaminyltransferase"
FT                   /db_xref="GOA:A2CIU2"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/TrEMBL:A2CIU2"
FT                   /protein_id="ABE41672.1"
FT                   /translation="FVPDTEGHVYVAFIQMEKEDDFTTWTQLAKCLHIW"
FT   repeat_region   complement(214..340)
FT                   /rpt_family="B1_F-Element"
FT                   /rpt_type=DISPERSED
FT                   /note="SINE"
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SQ   Sequence 505 BP; 107 A; 152 C; 90 G; 156 T; 0 other;
     ctttgtgcca gacacagagg gccatgtcta tgtggcattc atccaaatgg aaaaagaaga        60
     tgactttacc acctggactc agcttgccaa ggtaccgcaa tacccgcccc aacacaaaag       120
     catcccctcc ccatgtggcc caagatgcaa tttcagcctc actcagaatc cttccagctc       180
     ctttgtccaa attcatattt ctttttcttt ttttttggtc ttttcgagac agggtctcgc       240
     tatgcagttg aggctggctt tgagctcact tttgtagccc aggctggtct tgaacttgca       300
     ccaatcctcc tgcctcagcc tcccgagtgc tgggattaca aaattcatat ttctgaagat       360
     actgtcattt gcagattgag atggctgttg aattcgcagc aatctcattc cacagctcct       420
     tgactcttct cactctctct ccgttctcta cctcgttttc tccctccatc tctatcttac       480
     ccctgccagt gcctccatat ctggg                                             505
//
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