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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   DQ321385; SV 1; linear; genomic DNA; STD; ROD; 513 BP.
XX
AC   DQ321385;
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DT   31-DEC-2006 (Rel. 90, Created)
DT   11-JAN-2007 (Rel. 90, Last updated, Version 2)
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DE   Ondatra zibethicus O-mannosyl N-acetylglucosaminyltransferase gene, partial
DE   cds.
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KW   .
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OS   Ondatra zibethicus (muskrat)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Cricetidae; Arvicolinae; Ondatra.
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RN   [1]
RP   1-513
RX   DOI; 10.1080/10635150601064806
RX   PUBMED; 17345675.
RA   Farwick A., Jordan U., Fuellen G., Huchon D., Catzeflis F., Brosius J.,
RA   Schmitz J.;
RT   "Automated scanning for phylogenetically informative transposed elements in
RT   rodents";
RL   Syst. Biol. 55(6):936-948(2006).
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RN   [2]
RP   1-513
RA   Farwick A., Jordan U., Fuellen G., Huchon D., Catzeflis F., Brosius J.,
RA   Schmitz J.;
RT   ;
RL   Submitted (09-DEC-2005) to the EMBL/GenBank/DDBJ databases.
RL   ZMBE, Institute of Experimental Pathology, Von Esmarch Strasse 56, Muenster
RL   48149, Germany
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FH   Key             Location/Qualifiers
FH
FT   source          1..513
FT                   /organism="Ondatra zibethicus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:10060"
FT   mRNA            join(<1..89,499..>513)
FT                   /product="O-mannosyl N-acetylglucosaminyltransferase"
FT   CDS             join(<1..89,499..>513)
FT                   /codon_start=3
FT                   /product="O-mannosyl N-acetylglucosaminyltransferase"
FT                   /db_xref="GOA:A1XAC3"
FT                   /db_xref="InterPro:IPR004139"
FT                   /db_xref="UniProtKB/TrEMBL:A1XAC3"
FT                   /protein_id="ABC69775.1"
FT                   /translation="PADTEGHTYVAFIRMEKDDDFTTWTQLAKCLHIW"
FT   intron          90..498
FT   repeat_region   215..372
FT                   /rpt_family="B1"
FT                   /rpt_type=DISPERSED
FT                   /note="SINE"
XX
SQ   Sequence 513 BP; 124 A; 151 C; 108 G; 130 T; 0 other;
     ttcctgccga cacagagggc catacctatg tggcctttat cagaatggag aaagatgatg        60
     acttcaccac ctggactcag cttgccaagg tgccccaggg cctcactact tcaggagtac       120
     cctccccaac atgcattgcc ccatctaagc agggggactt tgtagagttt tcagcctcag       180
     accttttcat tttctcaaga accccacttc ctggccaggt gtggttgtgt ggtgataaac       240
     acctttaata caagcactca gggaggcaga ggcaggcgaa tctcttaggt ttaaggtcag       300
     cctggtctac agaacaagtt ccctgattgt cagggctaca caaagaaatc ctgtttcaaa       360
     aaacaaagag cctctcttct aagccttcgc ccaaatccat actccagagc atgcttgctc       420
     ttgaggcagc tgctagacct tcagtggctg tcaccacagc tccctgaccc atctccttcc       480
     ctactctatc cctgtcagtg cctccatatt tgg                                    513
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