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EBI DbfetchID DQ241785; SV 1; linear; genomic DNA; STD; PRO; 2760 BP. XX AC DQ241785; XX DT 09-NOV-2005 (Rel. 85, Created) DT 09-NOV-2005 (Rel. 85, Last updated, Version 1) XX DE Bacillus subtilis isolate DV3-D-2 quorum-sensing gene locus, partial DE sequence. XX KW . XX OS Bacillus subtilis OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-2760 RA Sabotic J., Cepon U., Cadez P., Mandic Mulec I.; RT "Variability of Bacillus sp. quorum sensing system"; RL Unpublished. XX RN [2] RP 1-2760 RA Sabotic J., Cepon U., Cadez P., Mandic Mulec I.; RT ; RL Submitted (14-OCT-2005) to the EMBL/GenBank/DDBJ databases. RL Department of Food Science and Technology, Biotechnical Faculty, University RL of Ljubljana, Jamnikarjeva 101, Ljubljana 1000, Slovenia XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Bacillus subtilis" FT /isolate="DV3-D-2" FT /mol_type="genomic DNA" FT /note="group W23" FT /db_xref="taxon:1423" FT misc_feature 1..>2760 FT /note="quorum-sensing gene locus" FT gene 1..840 FT /gene="comQ" FT CDS 1..840 FT /codon_start=1 FT /transl_table=11 FT /gene="comQ" FT /product="ComQ" FT /note="pre-ComX modifying enzyme" FT /db_xref="GOA:Q8VLM0" FT /db_xref="InterPro:IPR017446" FT /db_xref="UniProtKB/TrEMBL:Q8VLM0" FT /protein_id="ABB51993.1" FT /translation="MKEIVHEKIQNLDLKEYLINFIDEKNHFSFGILSFKHYVALSGNR FT SSHILTLAGGIELLILAFDIFDDLEDEDNIEIKWMKIDPSLALNAATTLYTLGLETICS FT ISNSAEFHRLTLKYALNAMQGQHEDLRNSPETEEECIQMMKQKAGSLTAMSAVLAAMLA FT NGEFNQTIEDYAYKIGIIKQLENDYYGLVNDQRSDIRKKRKTLIYLFLNRKFNEASEKI FT LKLINSHTSYHSFISDSSKFDELLFEAGLNQYVSMLIKLYEEEITASMNQLNINIKL" FT gene 855..1031 FT /gene="comX" FT CDS 855..1031 FT /codon_start=1 FT /transl_table=11 FT /gene="comX" FT /product="pre-ComX" FT /note="ComX pheromone precursor" FT /db_xref="GOA:Q8VL79" FT /db_xref="InterPro:IPR009233" FT /db_xref="UniProtKB/Swiss-Prot:Q8VL79" FT /protein_id="ABB51994.1" FT /translation="MKQDMIDYLMKNPQVLTKLENGEASLIGIPDKLIPSIVDIFNKKM FT TLSKKCKGIFWEQ" FT gene 1051..>2760 FT /gene="comP" FT CDS 1051..>2760 FT /codon_start=1 FT /transl_table=11 FT /gene="comP" FT /product="ComP" FT /note="histidine kinase sensor protein" FT /db_xref="UniProtKB/TrEMBL:Q306U2" FT /protein_id="ABB51995.1" FT /translation="MKNLKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHEL FT KVEKMTKATYGKYMGLKEGDLILEVSGKKPTSENIKRNYLAKAEHLKVKRDNHEIQLHN FT TEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISIAYL FT SAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYIVNILYTLPIINV FT IIEFIQKYLSSGIITNISNINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISN FT TVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLALVYQFVVNKIYDIDFILGRIR FT YYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRF FT SEKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDK FT QSVEPNWRLYKTEFEKVTKEIGKIIEINQGFLIKVGEKGTSSYVLLCLSSINTPRLTRD FT EISWLKTLSFYTSVSMENVVQIEELMDHLQALKREDANPVWLKKLMYTIEEKQ" XX SQ Sequence 2760 BP; 993 A; 352 C; 463 G; 952 T; 0 other; atgaaggaga ttgtacacga aaaaattcag aatttggatt tgaaagagta tttaatcaac 60 tttatcgatg agaaaaatca cttttctttt ggtatccttt cttttaagca ttacgtagca 120 ttaagcggta atcgttcttc gcatatttta acattggcag gaggaataga acttttaatc 180 ttagccttcg atatatttga tgatttagag gatgaggaca acattgaaat aaaatggatg 240 aaaattgatc cttctctcgc tctaaatgct gcaactaccc tttatacttt agggttagaa 300 actatttgtt ctattagcaa tagcgctgaa tttcatcggc taactttaaa atatgcatta 360 aatgctatgc agggacaaca tgaggattta aggaactctc ctgagacgga agaagaatgt 420 attcaaatga tgaaacaaaa agcaggttct cttacagcta tgtctgccgt tttagctgct 480 atgcttgcga atggagagtt taatcaaact attgaggatt atgcttataa gatagggata 540 ataaaacaat tggaaaatga ctattatggt ttagttaatg atcaacgtag tgatataaga 600 aaaaaaagaa agactttgat ttatttattt ttaaaccgca aatttaatga ggcttctgaa 660 aagatattaa aattaataaa ttctcatact agttatcata gttttatatc tgatagctct 720 aaatttgatg aattattatt tgaagcgggg cttaatcaat atgtatctat gctgattaag 780 ctttatgagg aagaaatcac agcaagcatg aatcaattaa atataaatat aaagttataa 840 agaggggtat acttatgaaa caagacatga ttgattactt aatgaagaat ccgcaagttt 900 taactaaatt agaaaatgga gaggcgagct taataggaat tccagataaa ctaatccctt 960 caattgtaga tattttcaac aaaaaaatga ctctctcaaa gaaatgcaag ggaattttct 1020 gggagcaata attcagagag aagtggtcta ttgaaaaacc ttaaaagaaa tttttctata 1080 gtgctagtat tatttagtct cttatatttt gcttatattg tttatttcac tcagaatggt 1140 atcttagttg gtacttatgt ttctgaaaca gccaatcatg agttaaaagt tgaaaaaatg 1200 actaaagcca catatggaaa atatatgggc ttaaaagaag gcgacttaat actcgaggta 1260 agtgggaaga aacctacaag tgagaatatt aaaagaaatt atttagcaaa agctgaacat 1320 ttaaaagtta aaagggataa tcatgaaatt caattacata atacggagta tatctcttta 1380 aataattctt atagcttttt catttatatt atcccttgta tattttttgc tttgagtctg 1440 ttatgtgcat tttatattta tagggtcaat cgagtaaaaa atacgtactc ggcttatatt 1500 ttgattaatt ttttgctgtt tatatctata gcatatttaa gtgctggagg cgtaactaga 1560 gggtatgaaa taaatagata tattaatctt tttacctttt taaatgtacc tgtcttgtat 1620 ttgcattttc tatatcaata tttcaaagaa ttaagcatca aattttcatc acgttatatc 1680 gtgaatattt tatacacgtt gccaattatc aatgtaataa tagaattcat ccagaaatac 1740 ctttcttcgg ggattattac gaatattagt aatattaatt tagtaacatt cttaatagag 1800 attacagttg tttatttttg cattatctat tatgggataa tttatagaaa aaaggatcat 1860 tattatttgt tgaaggtatt attgatttca aatacggtag ctttctttcc ttttacggtc 1920 ttatatatca tgccggaagt tttatttggg caatatattt actcagcaat agtgactgcg 1980 ccattcttaa taattatccc attagcattg gtttatcaat tcgttgtaaa taaaatttat 2040 gatatagact ttatactagg cagaattaga tattatagtt tattatccat cataccaaca 2100 ataggcatag tatggttgtc aataatattt gatagcaaaa gagcggattt taatatcatc 2160 ttaattacgt tatgtacgtt cataattttt ctgtcggtct tttatattaa agaattactg 2220 gactataaat ttcggttaaa acgattttcg gaaaaatata attatcaaga cagtatattt 2280 aaatatacgc aattaattaa aggtgtatca gctttagatc aagtatttaa gaacttaaaa 2340 acaacaatac tagaagttct acccgtaagt aaagcctaca tctttgaagt tggtgctgat 2400 agagaaatca tatactttga taaacagagt gttgaaccca actggaggct atataaaaca 2460 gaatttgaaa aggtcactaa agaaataggg aagattattg agattaacca aggctttttg 2520 atcaaagtag gggaaaaagg tacgagttct tatgtattgc tttgtttatc tagcatcaat 2580 acaccaaggt tgacaagaga tgaaatttca tggctgaaaa cattatcgtt ttatactagt 2640 gtatccatgg aaaatgttgt acaaattgaa gaactcatgg atcatttaca agctttaaaa 2700 agggaagatg ctaaccccgt atggctcaaa aaactcatgt acacgatcga agaaaaacaa 2760 // |
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