EBI Dbfetch

ID   D89650; SV 1; linear; genomic DNA; STD; FUN; 1688 BP.
XX
AC   D89650;
XX
DT   15-JUN-1997 (Rel. 52, Created)
DT   13-DEC-2005 (Rel. 86, Last updated, Version 5)
XX
DE   Geotrichum klebahnii PSE3 gene for protopectinases SE3, complete cds.
XX
KW   .
XX
OS   Geotrichum klebahnii
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Dipodascaceae; mitosporic Dipodascaceae; Geotrichum.
XX
RN   [1]
RP   1-1688
RA   Iguchi K., Hirano H., Kishida M., Kawasaki H., Sakai T.;
RT   ;
RL   Submitted (02-DEC-1996) to the EMBL/GenBank/DDBJ databases.
RL   Masao Kishida, Osaka Prefecture University, Department of Applied
RL   Biochemistry, College of Agriculture; Gakuen-cho 1-1, Sakai, Osaka 593,
RL   Japan (E-mail:masyksd@biochem.osakafu-u.ac.jp, Tel:+81-722-52-1161,
RL   Fax:+81-722-52-0341)
XX
RN   [2]
RA   Iguchi K., Hirano H., Kishida M., Kawasaki H., Sakai T.;
RT   "Cloning of a protopectinase gene of Trichosporon penicillatum and its
RT   expression in Saccharomyces cerevisiae";
RL   Microbiology 143:1657-1664(1997).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1688
FT                   /organism="Geotrichum klebahnii"
FT                   /strain="B2"
FT                   /mol_type="genomic DNA"
FT                   /note="synonym: Trichosporon penicillatum"
FT                   /db_xref="taxon:44065"
FT   TATA_signal     15..22
FT   CDS             143..1246
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="PSE3"
FT                   /product="protopectinases SE3"
FT                   /db_xref="GOA:P87217"
FT                   /db_xref="HSSP:1IB4"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:P87217"
FT                   /protein_id="BAA20427.1"
FT                   /translation="MLFSKSAIFAMAALAVAAPTEGDLQARGSACVFKDAKSAIAGKKS
FT                   CSSITLENIAVPAGQTLDLTGLAKGTVVTFAGTTTFGYKEWAGPLISVSGDSITVKQAS
FT                   GGKIDCGGSRWWDGKGSNSGGKQKPKFFYAHKLQNSNIQGLQVYNTPVQAFSILSDHLT
FT                   LSNILVDNRAGDKAGGHNTDAFDVGTSTYITIDHATVYNQDDCLAINSGDHITFQNGFC
FT                   SGGHGLSIGSVGGRSLNTVSNVNILNSQVVNSDNGVRIKTISGATGSVSGVKFQDITLS
FT                   NIAKYGIDVQQDYRNGGPTGNPTNGVKITGIEFINIHGSVKSSGTNAYLLCGSGSCSNW
FT                   TWSKINVKGGKDSGACKNVPSGATCKL"
FT   polyA_signal    1451..1456
FT   polyA_signal    1458..1463
XX
SQ   Sequence 1688 BP; 444 A; 372 C; 329 G; 543 T; 0 other;
     gatgctctgt ttactataaa tatctgtgaa tcgcctgcaa ttattttttt ttttgataaa        60
     tcttcaagct caacaactct tcttctttga actgataaaa agccttatag actctcttat       120
     ttgttcactc ttaactataa caatgctttt ttctaaatct gctatctttg ctatggctgc       180
     tcttgcagtt gctgctccta ctgaaggtga ccttcaagct cgtggcagcg cctgtgtttt       240
     taaggatgcc aagtctgcta ttgctggcaa gaagtcttgt tcttctatca ctcttgagaa       300
     cattgctgtc cccgctggtc aaactcttga tctcactgga cttgccaagg gcactgttgt       360
     cacctttgct ggtaccacca cttttggcta caaggagtgg gctggtcctt tgatctccgt       420
     ttctggtgat tctattactg tcaagcaggc ctccggcggt aagattgact gtggtggttc       480
     tcgttggtgg gacggtaagg gttccaactc tggtggtaag caaaagccca agttctttta       540
     cgcccacaag ctccagaact ccaacattca gggactccaa gtttacaaca cccctgtcca       600
     ggctttcagc attttgtctg accatttgac tttgtcaaac attctcgttg acaacagagc       660
     cggtgacaag gctggtggtc acaacaccga cgcttttgat gttggtacca gtacttacat       720
     cactatcgac catgctacgg tctacaacca ggacgactgt cttgctatca actccggtga       780
     ccacatcact ttccagaacg gtttctgctc tggtggacat ggtctttcta ttggctccgt       840
     tggtggccgc tctcttaaca ctgtttccaa cgtcaatatt cttaacagtc aggttgtcaa       900
     ctctgataac ggtgtccgta ttaagaccat ttctggtgct actggttctg tcagcggtgt       960
     taagttccag gacattactc tctccaacat tgccaagtac ggtattgatg ttcagcagga      1020
     ctaccgtaac ggtggcccca ctggtaaccc cactaacgga gtcaagatca ctggaatcga      1080
     gttcatcaac attcacggta gtgtcaagag ctctggtacc aacgcttacc ttctctgtgg      1140
     ttccggctct tgctccaact ggacctggag caagatcaac gtcaagggtg gcaaggacag      1200
     cggtgcttgc aagaacgttc cttctggtgc tacttgcaaa ctttaaatag caactatata      1260
     tactacctta aactaagaaa cttacattat ttttaaacac tattaaattt tcacaaattt      1320
     aatacacaaa cgttcaatga agggaaaccg tggacagtaa gaatgagttg aaacttgact      1380
     gaatacttga gttgttattt tgtacttgtt ttagtaagcc taataaggat ccatcattta      1440
     aggaaaaaaa aataaataat aaataaacgt tcatttatct tcaaaatgtc atcagtaaag      1500
     tttcctatca aaagttgtaa aagactttca tgttaaaaaa atgtttgtca gttatcaaga      1560
     ggtttttctc tcaattgtca agaaaaatga aaccagacaa ttattcatat tagaatgttc      1620
     agtaacttaa ttagttcatg tctgtttttg tagtgcctgt agtgatagtt tcttagactt      1680
     tttttgac                                                               1688
//