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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D89477; SV 1; linear; mRNA; STD; MAM; 1899 BP.
XX
AC   D89477;
XX
DT   10-DEC-1996 (Rel. 50, Created)
DT   27-DEC-2006 (Rel. 90, Last updated, Version 4)
XX
DE   Sus scrofa mRNA for short-chain acyl-CoA dehydrogenase, complete cds.
XX
KW   short-chain acyl-CoA dehydrogenase.
XX
OS   Sus scrofa (pig)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
XX
RN   [1]
RP   1-1899
RA   Hamasima N.;
RT   ;
RL   Submitted (21-NOV-1996) to the EMBL/GenBank/DDBJ databases.
RL   Noriyuki Hamasima, STAFF-Institute, Animal Genome Research Program Team;
RL   446-1 Ippaizuka, Kamiyokoba, Tsukuba, Ibaraki 305, Japan
RL   (E-mail:hamasima@gene.staff.or.jp, Tel:0298-38-2190, Fax:0298-38-2337)
XX
RN   [2]
RA   Suzuki H., Itoh T., Kimura M., Murakami Y., Hamasima N., Yasue H.;
RT   "Isolation of the pig short-chain acyl-CoA dehydrogenase gene and
RT   assignment to chromosome 14q16.2-q23.2";
RL   Unpublished.
XX
DR   Ensembl-Gn; ENSSSCG00000009916; Sus_scrofa.
DR   Ensembl-Tr; ENSSSCT00000010866; Sus_scrofa.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1899
FT                   /organism="Sus scrofa"
FT                   /chromosome="14"
FT                   /map="14q16.2-q23.2"
FT                   /mol_type="mRNA"
FT                   /tissue_type="liver"
FT                   /note="porcine"
FT                   /db_xref="taxon:9823"
FT   CDS             5..1246
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="short-chain acyl-CoA dehydrogenase"
FT                   /db_xref="GOA:P79273"
FT                   /db_xref="InterPro:IPR006089"
FT                   /db_xref="InterPro:IPR006090"
FT                   /db_xref="InterPro:IPR006091"
FT                   /db_xref="InterPro:IPR006092"
FT                   /db_xref="InterPro:IPR009075"
FT                   /db_xref="InterPro:IPR009100"
FT                   /db_xref="InterPro:IPR013764"
FT                   /db_xref="InterPro:IPR013786"
FT                   /db_xref="UniProtKB/Swiss-Prot:P79273"
FT                   /protein_id="BAA13964.1"
FT                   /translation="MAAALLARACGPVRGALWPRDCRRLHTIFQSVELPETYQMLRQTC
FT                   RDFAEKELVPIAAQVDKEHRFPEAQVKKMGELGLMAMDVPEELSGAGLDYLAYTIAMEE
FT                   ISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDA
FT                   GAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFLVPMPTAGL
FT                   TLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMKTLDMGRIGIASKALG
FT                   ISQAALDCAVNYAENRRAFGVPLTKLQGIQFKLADMALALESARLLTWRAAMLKDNKKN
FT                   PFIKEPAMAKLAASEAATAITHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQ
FT                   RLVIAGHLLKSYRS"
XX
SQ   Sequence 1899 BP; 385 A; 559 C; 560 G; 395 T; 0 other;
     cttcatggct gccgcgctgc tcgcccgagc ctgcggccct gtccgcggag ctctctggcc        60
     tcgggactgt cgtcgcttgc ataccatctt ccagtctgtg gaactgcctg agacatacca       120
     gatgctgcgt cagacatgcc gggattttgc cgagaaggag ctggttccca ttgcagccca       180
     ggtggacaag gaacatcgct tcccggaggc tcaggtgaag aagatgggcg agctggggct       240
     catggccatg gatgtgcccg aggagttaag tggtgccggc ctggattacc tggcctacac       300
     catcgccatg gaggagatca gccggggctg cgcctccacc ggagtcatca tgagtgtcaa       360
     caattttctc tacttgggac ctatcctgaa gtttggctcc aaggagcaga aacagcagtg       420
     gatcactcct ttcaccagtg gtgacaaagt tggctgcttt gccctcagtg aaccagggaa       480
     cggcagcgac gcaggggctg ctgccaccac cgcccaggca gaccatgact cgtgggtcct       540
     gagtggcacc aaagcctgga tcaccaacgc ctgggaggcc tcggccgccg tggtcttcgc       600
     cagcacggac agatccttgc agaacaaggg catcagcgcc ttcctggttc ccatgccgac       660
     ggctgggctc acgctaggga agaaagagga caagctgggc atccgggcct catccaccgc       720
     caacctcatt tttgaggact gtcgcatccc caaggagaac ctgctggggg agcctggcat       780
     gggcttcaag atcgccatga aaaccctgga catgggccgc atcggcattg cctctaaggc       840
     cctgggcatt tcccaggccg ccctggactg tgctgtgaac tatgctgaaa accgcagggc       900
     ctttggggtg ccgctcacca agctccaggg catccagttc aagttggcgg acatggcctt       960
     ggccctggaa agtgcccggc tgctgacctg gcgcgctgct atgctgaaag ataataagaa      1020
     gaacccattc atcaaggagc cggcaatggc caagctggct gcatcggagg ctgcaactgc      1080
     catcacccac caggccatcc agatcttggg tggcatgggc tatgtgacag agatgcctgc      1140
     tgaacggcac taccgtgacg cccgcatcac tgagatttac gaaggcacca gtgagatcca      1200
     gaggctggtg atcgccgggc acctgctcaa gagctacagg agctgagccc tctgtagggc      1260
     caaccagtgc cctccggagg cagggctggc ctgagggtca cgggagaggc gcggagccat      1320
     gtgcctttac cctgactcca agtcaggggg ccacgcctcc tcttgccagg actcccccag      1380
     aacccagccc ttctgggtgg acctgccact ctcaccttca tccacccggg aatagactgc      1440
     cagggagcac atctcagagg aaggaaaggt gggcctgtga cctggcctga ggacccccat      1500
     cttcagctca gtttcttggc tttgctccct ctcaccatca cctgtgcctt attttcttca      1560
     tctggaggca gggccgtgga aagagcgaaa ttatcactca gggactcccc agctctgttc      1620
     tttgtgccct ggtgctcagc atgagaccca ggtgtgactg cttttggcag tgtctgcttt      1680
     ttcccctgag gtcagagttc gggaggagta gtttgggggc cagaatgacc aggcttcaaa      1740
     gcagcagaaa ttgtgttctc aggcctctgg cagtcttggg gttggatcat tgtggaagct      1800
     gccctgccct gcgccccttt aacctttttt tgtcaggtgt aaataagtga ttggggccag      1860
     tcacatgtgg gaactaagta ataaagcata cctgtccct                             1899
//
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