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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D88417; SV 1; linear; mRNA; STD; PLN; 1379 BP.
XX
AC   D88417;
XX
DT   06-JUL-1997 (Rel. 52, Created)
DT   27-DEC-2006 (Rel. 90, Last updated, Version 4)
XX
DE   Gossypium hirsutum mRNA for endo-1,4-beta-glucanase, clone CF996, partial
DE   cds.
XX
KW   endo-1,4-beta-glucanase.
XX
OS   Gossypium hirsutum (upland cotton)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Malvales; Malvaceae; Malvoideae; Gossypium.
XX
RN   [1]
RP   1-1379
RA   Aotsuka S.;
RT   ;
RL   Submitted (15-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL   Satoshi Aotsuka, NISSHINBO INDUSTRIES, INC., Tokyo Research Center;
RL   Nishiarai Sakae-cyou 1-18-1, Adachi-ku, Tokyo 123, Japan
RL   (E-mail:KYH05411@niftyserve.or.jp, Tel:+81-3-3887-7801,
RL   Fax:+81-3-3886-3199)
XX
RN   [2]
RA   Aotsuka S., Hasegawa O., Uchimiya H.;
RT   "Cotton mRNA for endo-1,4-beta-glucanase, clone CF996, partial cds.";
RL   Unpublished.
XX
RN   [3]
RX   PUBMED; 9150611.
RA   Shimizu Y., Aotsuka S., Hasegawa O., Kawada T., Sakuno T., Sakai F.,
RA   Hayashi T.;
RT   "Changes in levels of mRNAs for cell wall-related enzymes in growing cotton
RT   fiber cells";
RL   Plant Cell Physiol. 38(3):375-378(1997).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Gossypium hirsutum"
FT                   /strain="Coker312"
FT                   /mol_type="mRNA"
FT                   /dev_stage="16-18 DPA"
FT                   /clone="CF996"
FT                   /tissue_type="cotton fiber"
FT                   /note="Common name: Cotton"
FT                   /db_xref="taxon:3635"
FT   CDS             <1..975
FT                   /codon_start=1
FT                   /product="endo-1,4-beta-glucanase"
FT                   /db_xref="GOA:O23954"
FT                   /db_xref="HSSP:1IA6"
FT                   /db_xref="InterPro:IPR019028"
FT                   /db_xref="UniProtKB/TrEMBL:O23954"
FT                   /protein_id="BAA21111.1"
FT                   /translation="PVFEKYRQKAEYFMCSLIGKGSRNIQKTPGGLIYRQRWNNMQFVT
FT                   SASFLATVYSDYLTSYRGSLKCAAGNVAPSELLSFAKSQVDYLLGDNPRATSYMVGYGN
FT                   NYPRQVHHRGSSIVSIKVNPKFVACRQGYATWYTRKASDPNVLTGALVGGPDAYDNFAD
FT                   ERDNYEQTEPATYNNAPLLGILARLAGGHGGYNQLLPVVAPVPNPVIAKPKPAPKPKRT
FT                   PTPASSSSPITINQKMTTSWNHKGKTYYRYSTVVTNKSYKTLKALKLSISKLYGPIWGL
FT                   TKSGNSYGFPEWLNSLPAGKSLEFVYIHAASPADVSVSSYNIA"
XX
SQ   Sequence 1379 BP; 393 A; 285 C; 295 G; 406 T; 0 other;
     ccagttttcg agaagtaccg tcagaaggcg gagtacttca tgtgttcatt gatcggaaag        60
     ggtagccgta atattcagaa gactcccggt ggtttgattt acagacagag atggaacaac       120
     atgcagttcg tgacaagcgc ttcgttcttg gcaaccgtct actctgatta tctaacttcc       180
     tataggggaa gcttgaagtg tgctgctggc aatgttgcac catcggagct tctttctttt       240
     gcgaaatctc aggtggatta ccttctcgga gacaatccaa gagctacaag ctatatggtt       300
     ggctacggaa acaattatcc aagacaagtt caccaccgag gttcttcgat tgtttcgatc       360
     aaggtcaacc ctaaatttgt tgcctgccga caaggttacg caacttggta tacaaggaaa       420
     gctagtgatc ctaatgtcct caccggtgct ttggtcggag ggcctgatgc ctatgataat       480
     tttgctgatg aaagagacaa ttatgagcaa acagaacctg ctacctataa caatgctcca       540
     cttcttggca ttttggctag attagctggt ggtcatggtg gatataacca actccttcct       600
     gtggttgccc cagtgcctaa tcctgtcatt gccaaaccga aaccggcacc gaagcccaaa       660
     cggactccaa ctcctgcctc atcttctagt ccaattacta taaaccagaa gatgacaact       720
     tcctggaatc acaagggcaa gacttactac agatattcca cagtagtgac caacaagtct       780
     tacaagacat taaaggctct caagctctca atatcaaagc tttatggtcc catatggggt       840
     ctcaccaagt ctggcaattc ttatggtttc ccagaatggc tcaactcttt acctgccgga       900
     aagagtcttg agtttgtata catccatgct gcttctcctg ctgatgtctc tgtttcaagc       960
     tacaatatag cttaataatg gaagccattg caaaaaaaaa agggtaaggt ccaacatggg      1020
     tctggggtgt ggtgttagaa tttgtgcagc tatacagaat gcgtcaaaga aaaaggtttt      1080
     cctttttttt tcttcgctgt ttggggattt tcaactttac ttgttgaatg gggtatttaa      1140
     ttagggttct accagatatt tagtggaaga ttggaggaga aatagataga attgagagac      1200
     agtaaaagag gatgaaaatt gagaaagtaa acaaattact tctcaataag attgcaagga      1260
     atctgttttt acttcctact tacacagcag cagctgatgc cttttttttt gttgtttgtg      1320
     ttgtaactgc aaactttagc attatatgtt ttccatataa atacagttcg cacaaaaac       1379
//
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