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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D88272; SV 1; linear; mRNA; STD; PLN; 1380 BP.
XX
AC   D88272;
XX
DT   29-DEC-1998 (Rel. 58, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Hordeum vulgare mRNA for formate dehydrogenase, complete cds.
XX
KW   formate dehydrogenase.
XX
OS   Hordeum vulgare
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade;
OC   Pooideae; Triticeae; Hordeum.
XX
RN   [1]
RP   1-1380
RA   Mori S.;
RT   ;
RL   Submitted (05-OCT-1996) to the EMBL/GenBank/DDBJ databases.
RL   Satoshi Mori, The University of Tokyo, Plant Molecular Physiolosy; Yayoi
RL   1-1-1, Bunkyo-ku, Tokyo 113, Japan (E-mail:aa67027@hongo.ecc.u-tokyo.ac.jp,
RL   Tel:03-3812-2111(ex.5106), Fax:03-3812-0544)
XX
RN   [2]
RX   DOI; 10.1104/pp.116.2.725
RX   PUBMED; 9489019.
RA   Suzuki K., Itai R., Suzuki K., Nakanishi H., Nishizawa N.K., Yoshimura E.,
RA   Mori S.;
RT   "Formate dehydrogenase, an enzyme of anaerobic metabolism, is induced by
RT   iron deficiency in barley roots";
RL   Plant Physiol. 116(2):725-732(1998).
XX
DR   GrainGenes; D88272; D88272.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1380
FT                   /organism="Hordeum vulgare"
FT                   /cultivar="Ehimehadaka No.1"
FT                   /mol_type="mRNA"
FT                   /tissue_type="root"
FT                   /db_xref="taxon:4513"
FT   CDS             71..1204
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="formate dehydrogenase"
FT                   /db_xref="GOA:Q9ZRI8"
FT                   /db_xref="HSSP:2NAD"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9ZRI8"
FT                   /protein_id="BAA36181.1"
FT                   /translation="MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKN
FT                   PNFVGCVEGALGIRDWLESKGHHYIVTDDKEGFNSELEKHIEDMHVLITTPFHPAYVTA
FT                   EKIKKAKTPELLLTAGIGSDHIDLPAAAAAGLTVARVTGSNTVSVAEDELMRILILLRN
FT                   FLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRYGRLLLQRLKPFNCNLLYHDRL
FT                   QINPELEKEIGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKEKIAKMKKGVIIVNN
FT                   ARGAIMDTQAVADACSSGHIAGYGGDVWFPQPAPKDHPWRYMPNHAMTPHISGTTIDAQ
FT                   LRYAAGVKDMLDRYFKGEEFPVENYIVKEGELASQYK"
FT   polyA_site      1380
FT                   /note="36 a nucleotides"
XX
SQ   Sequence 1380 BP; 344 A; 353 C; 390 G; 293 T; 0 other;
     gcctcgcccg ccattccccg tgaggtgatt ggcagattgc ttcttcctcc gccgggatcc        60
     ctccgtctcc atggccgcga tgtggagggc cgccgcgagg cagctcgtcg accgggcggt       120
     tggatccagg gccgcgcaca cgtctgcagg cagcaagaag atcgtcggcg tgttctacca       180
     ggccggcgag tacgccgaca agaaccccaa cttcgtcggc tgcgtcgagg gtgccctcgg       240
     catacgcgac tggctcgagt cgaaggggca ccactacatt gtcaccgacg acaaggaggg       300
     gtttaacagc gagctggaga agcacattga agacatgcat gtcctgataa ccaccccatt       360
     ccacccagcc tatgttactg cagaaaagat caagaaggca aagacccccg agctgcttct       420
     cacagctggg attggctcgg accatattga tttgccagct gctgctgctg caggcttgac       480
     tgtggccagg gtcactggaa gtaacaccgt ctctgtggca gaagatgagc tcatgcgcat       540
     cttgattctg ctcaggaact tcttgcctgg ctatcaacag gtcgttaaag gtgaatggaa       600
     tgttgcaggc attgcccata gggcttatga tcttgaggga aaaaccgtcg gaactgtcgg       660
     ggcaggtcgt tatggcaggc tcttacttca gcgcctgaag cccttcaact gcaacctgct       720
     ctaccatgac agacttcaga tcaacccaga gcttgagaaa gaaattgggg cgaaatttga       780
     agaggacctg gatgctatgc ttccaaagtg tgatgtcgtt gtgatcaaca cacctcttac       840
     tgagaaaact agaggcatgt tcaacaaaga aaagattgcg aagatgaaga aaggtgtaat       900
     cattgtgaat aacgctcggg gcgcaatcat ggatacccag gctgttgctg atgcttgctc       960
     cagcggtcac attgctggat acggaggtga tgtctggttc ccccaacccg cacccaagga      1020
     tcacccatgg cgctacatgc ctaatcacgc aatgacccct cacatttctg ggactacaat      1080
     tgatgcacag ctgaggtacg cggctggagt gaaggacatg ttggataggt acttcaaggg      1140
     cgaggagttc cccgtggaga actacatcgt caaggaaggc gagctcgcca gccagtacaa      1200
     gtagtaaccc aacccctccg acgctgcatg gtaacatatt tgaactatga agcgaggcgt      1260
     gagagaagaa accattgtgt tgttgtatga gcgttctctg agaacggaaa taatggatgt      1320
     ctgcctgggg gtgcaaccat ggcagcgaat aaaaagctct gggacgaggt tatctgaaag      1380
//
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