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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D86855; SV 2; linear; genomic DNA; STD; PRO; 1641 BP.
XX
AC   D86855;
XX
DT   04-MAR-1997 (Rel. 51, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
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DE   Caldococcus noboribetus icd gene for isocitrate dehydrogenase, complete
DE   cds.
XX
KW   icd; isocitrate dehydrogenase.
XX
OS   Caldococcus noboribetus
OC   Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Caldococcus.
XX
RN   [1]
RP   1-1641
RA   Aoshima M.;
RT   ;
RL   Submitted (01-AUG-1996) to the EMBL/GenBank/DDBJ databases.
RL   Miho Aoshima, Tokyo University of Pharmacy and Life Science, Department of
RL   Molecular Biology; Horinouchi 1432-1, Hachioji, Tokyo 192-03, Japan
RL   (E-mail:miporin@ls.toyoku.ac.jp, Tel:0426-76-7134, Fax:0426-76-7145)
XX
RN   [2]
RP   1-1640
RA   Aoshima M., Yamagishi A., Oshima T.;
RT   "Eubacteria-type isocitrate dehydrogenase from an Archaeon: Cloning,
RT   sequencing, and expression of a gene encoding isocitrate dehydrogenase from
RT   a hyperthermophilic archaebacterium Caldococcus noboribetus";
RL   Unpublished.
XX
RN   [3]
RX   DOI; 10.1006/abbi.1996.0534
RX   PUBMED; 8951037.
RA   Aoshima M., Yamagishi A., Oshima T.;
RT   "Eubacteria-type isocitrate dehydrogenase from an archaeon: cloning,
RT   sequencing, and expression of a gene encoding isocitrate dehydrogenase from
RT   a hyperthermophilic archaebacterium, Caldococcus noboribetus";
RL   Arch. Biochem. Biophys. 336(1):77-85(1996).
XX
CC   Sequence updated (14-Jan-2000)
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FH   Key             Location/Qualifiers
FH
FT   source          1..1641
FT                   /organism="Caldococcus noboribetus"
FT                   /strain="NC12"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:57174"
FT   CDS             107..1396
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="icd"
FT                   /product="isocitrate dehydrogenase"
FT                   /db_xref="GOA:P96318"
FT                   /db_xref="HSSP:1HQS"
FT                   /db_xref="InterPro:IPR004439"
FT                   /db_xref="UniProtKB/Swiss-Prot:P96318"
FT                   /protein_id="BAA13177.2"
FT                   /translation="MVSHPCTADEAKPPSEGQLARFENGKLIVPDNLIVAYFKGDGIGP
FT                   EIVESAKKVLDAAVDKAYGGTRRIVWWEVTAGEEAQKECGSLLPDGTLQAFKLARVNLK
FT                   GPLTTPVGGGFRSLNVTLRMVLDLYSNVRPVKWYGQPTPHCHPENIDWVIFRENTEDVY
FT                   AGIEWPFDSPEAQKIRDFLKKEFGIELTPDTGIGIKPISKWRTQRHVRRAMEWAIRNGY
FT                   KHVTIMHKGNIMKYTEGAFRQWAYDLILSEFRDYVVTEEEVNTKYGGKAPEGKIIVNDR
FT                   IADNMLQQIITRPGEYNVIVTPNLNGDYISDEANALVGGIGMAAGLDMGDGIAVAEPVH
FT                   GSAPKYAGKNVINPTAEILSGMYLLSDFVGWPEVKLLVEYAVKQAIAHKQVTYDLAREM
FT                   GGVTPISTTEYTDVLVDYIRHADLKALKGQ"
FT   terminator      1422..1429
XX
SQ   Sequence 1641 BP; 415 A; 449 C; 476 G; 301 T; 0 other;
     aaggaagccc tatgagaaga ccttaaagga aatcttaggc ctaacgtaat aagactacat        60
     ttaacctttt taaagcctcg tatgtaccct ctacctggga cctttcatgg tctctcaccc       120
     atgcactgca gatgaggcta agcctccttc agagggccag ctggcaaggt ttgagaacgg       180
     caagctcata gtgcctgaca acctaatagt tgcttacttc aagggcgacg gcatagggcc       240
     tgagatagtt gaaagcgcta agaaggtgct tgacgcagca gttgacaagg cctacggggg       300
     caccaggagg atagtctggt gggaggtgac agctggcgag gaggcccaga aggagtgcgg       360
     ctccctcctg cccgacggca cgcttcaggc cttcaagctg gctcgcgtca accttaaggg       420
     gcccctgacc acgcccgttg gaggcggctt caggagcctc aacgtgaccc tcaggatggt       480
     gcttgacctg tactcaaacg tcaggccagt caagtggtac ggccagccga ctccgcactg       540
     ccacccagag aatatagact gggtgatatt tagggagaac acggaggacg tctacgctgg       600
     catcgagtgg cccttcgaca gccccgaggc ccagaagata agggacttcc tcaagaagga       660
     gttcggtata gagctgacgc cagacacagg cataggcatt aagcccatat ccaagtggag       720
     gacgcagagg cacgtcagga gggccatgga gtgggccata aggaacggct ataagcacgt       780
     gactataatg cacaagggca acataatgaa gtacacggag ggcgccttca ggcagtgggc       840
     ctacgacctc atactctcag agttcaggga ctacgtggtc accgaggagg aggttaacac       900
     caagtacggc ggcaaggcgc cggagggcaa gataatagtt aatgacagga ttgctgacaa       960
     catgttgcag cagataataa ccaggcccgg cgagtacaac gttatagtaa cccccaacct      1020
     gaacggtgac tacataagcg acgaggccaa cgccctggtg ggcggcattg gaatggctgc      1080
     gggacttgac atgggcgatg gcatagcggt tgcggagcca gtccacggca gcgcccccaa      1140
     gtacgctggt aagaacgtca taaacccgac cgccgagata ctgagcggca tgtacctgct      1200
     cagcgacttc gtgggatggc cagaggtcaa gctgctggtt gagtacgcag tcaagcaggc      1260
     gatagcccac aagcaggtga cctatgacct ggccagggag atgggagggg taacgccaat      1320
     atcgaccacg gagtacaccg atgtcctagt tgactacata aggcacgcgg acctcaaggc      1380
     cctcaagggc cagtgaaggc ctgccttagc cctcaccctc tattttcttt aggatatcgc      1440
     acacctctga gagcctgttg actctgtact ttgccacgcc ctcaagggac ccgtcatcac      1500
     cgatggcaac agggtagccg acaagcttca tggcctctgc gtcccacttt gagtcaccga      1560
     cgtacatgac ctccccgagg ctgaccccaa gttcgccaac caggagcttt agggccctgg      1620
     ccttgttgac cccaactgca g                                                1641
//
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