 |
|
EBI DbfetchID D83378; SV 1; linear; mRNA; STD; PLN; 2141 BP. XX AC D83378; XX DT 27-FEB-1996 (Rel. 46, Created) DT 20-FEB-2008 (Rel. 94, Last updated, Version 12) XX DE Oryza sativa Japonica Group mRNA for asparagine synthetase, complete cds. XX KW asparagine synthetase. XX OS Oryza sativa Japonica Group OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP clade; OC Ehrhartoideae; Oryzeae; Oryza. XX RN [1] RP 1-2141 RA Yamaya T., Higuchi T.; RT ; RL Submitted (05-FEB-1996) to the EMBL/GenBank/DDBJ databases. RL Contact:Tomoyuki Yamaya Tohoku University, Dept. of Applied Biological RL Chemistry, Faclty of Agriculture; 1-1 Tsutsumidori-Amamiyamachi, Aoba-ku, RL Sendai, Miyagi 981, Japan XX RN [2] RX DOI; 10.1046/j.1365-313X.1994.6040615.x RX PUBMED; 7987417. RA Sasaki T., Song J., Koga-Ban Y., Matsui E., Fang F.; RT "Toward cataloguing all rice genes: large-scale sequencing of randomly RT chosen rice cDNAs from a callus cDNA library"; RL Plant J. 6(4):615-624(1994). XX RN [3] RA Watanabe K., Higuchi T., Sakai T., Yamaya T.; RT "Nucleotide sequence of cDNA encoding asparagine synthetase (accession no. RT D83378) from rice callus (PGR 96-020)"; RL Plant Physiol. 111:347-347(1996). XX FH Key Location/Qualifiers FH FT source 1..2141 FT /organism="Oryza sativa Japonica Group" FT /cultivar="Nipponbare" FT /mol_type="mRNA" FT /clone="C635" FT /tissue_type="callus" FT /db_xref="taxon:39947" FT CDS 134..1909 FT /codon_start=1 FT /product="asparagine synthetase" FT /db_xref="GOA:Q43011" FT /db_xref="HSSP:1CT9" FT /db_xref="InterPro:IPR014729" FT /db_xref="UniProtKB/Swiss-Prot:Q43011" FT /protein_id="BAA18951.1" FT /translation="MCGILAVLGVADVSLAKRSRIIELSRRLRHRGPDWSGIHCYQDCY FT LAHQRLAIVDPTSGDQPLYNEDKSVVVTVNGEIYNHEELKANLKSHKFQTASDCEVIAH FT LYEEYGEEFVDMLDGMFAFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKA FT LSDDCERFISFPPGHLYSSKTGGLRRWYNPPWFSESIPSTPYNPLLLRQSFEKAIIKRL FT MTDVPFGVLLSGGLDSSLVASVVSRHLAEAKVAAQWGNKLHTFCIGLKGSPDLRAAKEV FT ADYLGTVHHELHFTVQEGIDALEEVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKMVL FT SGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTSAWGVEARVPFL FT DKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDEEKPYLPKHILYRQKEQFSDGVG FT YSWIDGLKDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPKNAARLTVPG FT GPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHDAAYEDTLQKSPASANPVLDNGFGPA FT LGESMVKTVASATAV" FT polyA_site 2141 XX SQ Sequence 2141 BP; 532 A; 461 C; 530 G; 618 T; 0 other; ggacgcgtgg gtgcggattc cattctcctc ttggcatcac gaggcggcgc cgcttggtct 60 agctagtagc cacagggaga ggtggtagcc gcagccgccg ccgacgagac ctcgccgccg 120 gggggagggc accatgtgtg gcatcctcgc cgtgctcggc gtcgcagacg tctccctcgc 180 caagcgctcc cgcatcatcg agctatcccg ccggttacgt catagaggcc ctgattggag 240 tggtatacac tgctatcagg attgctatct tgcacaccag cggttggcta ttgttgatcc 300 cacatccgga gaccagccgt tgtacaatga ggacaaatct gttgttgtga cggtgaatgg 360 agagatctat aaccatgaag aattgaaagc taacctgaaa tctcataaat tccaaactgc 420 tagcgattgt gaagttattg ctcatctgta tgaggaatat ggggaggaat ttgtggatat 480 gttggatggg atgttcgctt ttgttcttct tgacacacgt gataaaagct tcattgcagc 540 ccgtgatgct attggcattt gtcctttata catgggctgg ggtcttgatg gttcggtttg 600 gttttcgtca gagatgaagg cattaagtga tgattgcgag cgattcatat ccttcccccc 660 tgggcacttg tactccagca aaacaggtgg cctaaggaga tggtacaacc caccatggtt 720 ttctgaaagc attccctcca ccccgtacaa tcctcttctt ctccgacaga gctttgagaa 780 ggctattatt aagaggctaa tgacagatgt gccatttggt gttctcttgt ctggtggact 840 ggactcttct ttggttgcat ctgttgtttc gcggcacttg gcagaggcaa aagttgccgc 900 acagtgggga aacaaactgc atacattttg cattggtttg aaaggttctc ctgatcttag 960 agctgctaag gaagttgcag actaccttgg tactgttcat cacgaactcc acttcacagt 1020 gcaggaaggc attgatgcac tggaggaagt catttaccat gttgagacat atgatgtaac 1080 gacaattaga gcaagcaccc caatgttctt gatgtcacgt aaaattaaat ctttgggggt 1140 gaagatggtt ctttcgggag aaggttctga tgaaatattt ggcggttacc tttattttca 1200 caaggcacca aacaagaagg aattccatga ggaaacatgt cggaagataa aagcccttca 1260 tttatatgat tgcttgagag cgaacaaatc aacttctgca tggggtgttg aggcccgtgt 1320 tccgttcctt gacaaaaact tcatcaatgt agctatggac attgatcctg aatggaaaat 1380 gataaaacgt gatcttggcc gtattgagaa atgggttctc cggaatgcat ttgatgatga 1440 ggagaagccc tatttaccta agcacattct atacaggcaa aaggagcaat tcagtgatgg 1500 tgttgggtac agttggattg atggattgaa ggatcatgca aatgaacatg tatcagattc 1560 catgatgatg aacgctagct ttgtttaccc agaaaacact ccagttacaa aagaagcgta 1620 ctattatagg acaatattcg agaaattctt tcccaagaat gctgctaggt tgacagtacc 1680 tggaggtcct agcgtcgcgt gcagcactgc taaagctgtt gaatgggacg cagcctggtc 1740 caaaaacctt gatccatctg gtcgtgctgc tcttggtgtt catgatgctg catatgaaga 1800 tactctacaa aaatctcctg cctctgccaa tcctgtcttg gataacggct ttggtccagc 1860 ccttggggaa agcatggtca aaaccgttgc ttcagccact gccgtttaac tttctatcgt 1920 cgcataaaac tccgtagttt gttgttcttg gttcaatccc agcttctttc agatgtcgtt 1980 agtttcttca aacatgtaat ggagatgcgt gcttttcctg gcttgttagt tactgtatgc 2040 ttgtcatcgt gtatgttttc ttttcttttc caatatgcaa actgtttggt cgtggactga 2100 tcagaacatt gtaaatatga ataaccgcga ctgatatcct c 2141 // |
|