 |
|
EBI DbfetchID D63702; SV 1; linear; genomic DNA; STD; PRO; 3060 BP. XX AC D63702; XX DT 04-AUG-1995 (Rel. 44, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 8) XX DE Kurthia zopfii gene for chitinase, complete cds. XX KW . XX OS Kurthia zopfii OC Bacteria; Firmicutes; Bacillales; Planococcaceae; Kurthia. XX RN [1] RP 1-3060 RA Toyoda H.; RT ; RL Submitted (02-AUG-1995) to the EMBL/GenBank/DDBJ databases. RL Hideyoshi Toyoda, Kinki University, Faculty of Agriculture; 3327-204 RL Nakamachi, Nara, Nara 631-8505, Japan (E-mail:toyoda@nara.kindai.ac.jp, RL Tel:81-742-43-1511(ex.3114), Fax:81-742-43-1155) XX RN [2] RP 1-3060 RA Ikeda S., Toyoda H., Matsuda Y., Ouchi S.; RT "DNA sequence determination of a chitinase gene chiSHI cloned from RT gram-positive bacterium Kurthia Zopfii and its application to biological RT control of Powdry Mildew of Barley"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..3060 FT /organism="Kurthia zopfii" FT /mol_type="genomic DNA" FT /clone_lib="pUC19" FT /clone="chiSHI" FT /db_xref="taxon:1650" FT CDS 847..2946 FT /codon_start=1 FT /transl_table=11 FT /product="chitinase" FT /function="digestion of chitin" FT /db_xref="GOA:Q48494" FT /db_xref="HSSP:1ITX" FT /db_xref="InterPro:IPR001223" FT /db_xref="InterPro:IPR001579" FT /db_xref="InterPro:IPR003610" FT /db_xref="InterPro:IPR003961" FT /db_xref="InterPro:IPR003962" FT /db_xref="InterPro:IPR008957" FT /db_xref="InterPro:IPR011583" FT /db_xref="InterPro:IPR013781" FT /db_xref="InterPro:IPR017853" FT /db_xref="UniProtKB/TrEMBL:Q48494" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="BAA09831.1" FT /translation="MIPFNKHTALKKTATFLLGLSLLLSIIVPSFVLQPATASAADAYK FT IVGYYPSWAGYGRNYNVTDIDPTKVTHINYAFADICWNGVHGNPDPSGPNPVTWTCQNE FT KSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQINPNLKTIISVGG FT WTWSNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGLDGNSKRSGDKQ FT NYTLLLSKIREKLDAAGAVDGKKYLLTIASGASTTYAANTELANIASIVDWINIMTYDF FT NGAWQKVSAHNALLNYDPAASAAGVPDANTFNVAAGAQGHLNAGVPAAKLVLGVPFYGR FT GWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLETNYINKNGYTRYWNDTAKVPYLY FT NASNKRFISYDDAESIGYKTAYIKSKGLGGAMFWELSGDRNKTLQNKLKADLPTGGTVP FT PADTTAPSVPGNARSTGVTVNSVTLAWNASTDNVGVTGYNVYNGANLAASVNGTTATIS FT GLSAGTSYTFTIKAKDAAGNLSAASNAVTVSTTTQPGGDTQAPTAPTNLASTAQTTSSI FT TLSWAASTDNVGVTGYDVYNGTALATSVTGTTATISGLAADTSYTFTVKAKDAAGNSSV FT ASNALTVKTAAGTTNPGVSAWQANTAYTVGQLVTYSGKTYKCLQSHTSLPGWEPSNVPA FT LWQVQ" XX SQ Sequence 3060 BP; 787 A; 739 C; 817 G; 717 T; 0 other; ctttgcatta aatctgatat tgcctacctg caaagccagg ggaaaaaagt actgctttcc 60 atggggggag ccaacggtac cattgagctt accgacgcga ccaagagaca gcaattcgaa 120 gattcgttaa aatcaatcat ttccacgtat ggtttcaatg gtcttgatat cgatctggaa 180 ggaagttccc tctctctgaa tgcaggggat accgatttcc gtagtccaac tacaccgaaa 240 attattaacc tcatccaagg cgtgagagcg gttaagtcac attttggcgc taatttcatc 300 ctgacggctg cgccggagac ggcctatgta cagggtggat atctgagcta tggcggccct 360 tggggagctt acttgccagt catccatgcc ttgcgtaatg acctgaccct gcttcatgtg 420 cagcactata acacgggctc catggtgggg ctggatggac gctcttacgc gcaaggaaca 480 gctgatttcc atgtggccat ggcggagatg ctgcttcaag gcttccatgt aggcggcagc 540 tcaggcccgt tctttagtgc cttgcgaccg gaccagattg cgatcggcgt accggcctcc 600 caacaggctg ccgggggcgg gtataccacg ccagccgaac tgcagaaggc gctgaattac 660 ctaatcaaag gtgtgtcgta cggcggttcc tatactttcc cccagcctgc gggttatgcg 720 gggataaaag ggattatgac ctggtcaatc aattgggacg catatacgaa taaccagttt 780 tcgagcgcac atcgtccgtt cctgaatggg ctgagtacgc aaacgacaaa ggaggttgtg 840 tattagatga tacctttcaa taaacacact gctttaaaga agactgcaac gtttttactg 900 ggtctatccc tgctcttatc catcattgtt ccttcttttg tgctccaacc cgctacggcg 960 tcagcagccg atgcttataa aattgtcggt tactatccgt cttgggctgg gtacgggaga 1020 aactataacg taacggatat cgacccaacc aaggttacgc atatcaacta tgcttttgcc 1080 gatatctgct ggaacggtgt tcatgggaat ccggaccctt cgggccctaa tccggtgacc 1140 tggacatgcc agaatgaaaa gagccagaca atcaatgtac cgaatggaac aatcgtactt 1200 ggcgatccat ggattgatac cggcaagaca tttgcagggg atacgtggga tcagcccatt 1260 gcaggcaata tcaatcagct gaacaagctg aaacagatca atcctaatct gaagacgatc 1320 atctccgtcg gaggatggac atggtccaac cgcttctctg atgtggctgc gactgctgca 1380 acacgggagg tatttgcgaa ctctgctgtc gacttcctgc gcaaatacaa ttttgacggg 1440 gtagatttgg actgggagta tccggtatca ggcgggctgg atggtaacag caaacgctcc 1500 ggagataaac aaaattacac cctgcttctg agcaaaatcc gtgagaagct ggatgctgcc 1560 ggagctgtgg acggcaagaa gtatctgctt acgattgcaa gcggagcgtc gacgacctat 1620 gctgcgaata cagagcttgc caatatagct tccatcgtcg attggattaa tattatgaca 1680 tacgatttta acggggcttg gcaaaaagtc agcgcgcata acgcgctgtt aaactatgac 1740 cctgcggctt cggctgcagg ggtgccggat gccaatacat ttaatgtggc tgccggagca 1800 caagggcatc tgaatgccgg agtaccagcc gccaaacttg tgcttggtgt tccattctat 1860 ggccgcggct gggatggatg cgcacaggcg ggcaatggcc agtatcagac ctgcacggga 1920 ggttcatccg ttggaacatg ggaagcaggt tcctttgact tctatgatct ggagaccaac 1980 tacattaaca aaaacgggta cacgcgttac tggaatgata cggccaaagt gccatatctc 2040 tataatgcat ccaacaagcg ttttattagc tatgatgatg cggagtcgat tggatataaa 2100 accgcttata tcaagagcaa ggggctcggc ggtgcgatgt tctgggagct tagcggtgac 2160 cgcaacaaaa cactccaaaa taaactgaaa gccgatctgc ctaccggagg tacagtacct 2220 ccagcagata cgacggcgcc aagtgtaccg ggaaatgctc gctcgacagg tgtgacggtc 2280 aactcggtga cgctcgcttg gaatgcttca acggataatg tcggggttac cgggtataac 2340 gtctacaatg gtgccaatct tgctgcctcc gtcaacggaa cgaccgcaac aatcagcggt 2400 ctgtccgcgg gtacttccta tacttttacg atcaaagcaa aagatgcggc aggcaatctg 2460 tctgcggcca gtaatgctgt aaccgtaagc actacgactc aaccgggagg cgatacacaa 2520 gcgccaactg caccgacgaa cctggcatcg acagcgcaaa cgacatccag cataacgctg 2580 agctgggcgg catctacgga taacgtgggt gtaacgggtt atgatgtgta caatggaacg 2640 gctttggcga catctgtcac cggaacgaca gcaacgatca gtgggctcgc tgcggatacc 2700 tcgtatacat ttacggtaaa agcaaaggat gcggcgggga atagttctgt tgcgagcaat 2760 gcgttgactg tgaaaacggc agcagggacg acaaatccgg gcgtttccgc ctggcaggcg 2820 aatacagcct atactgtagg acaactggtc acgtatagcg gcaagacgta taaatgtttg 2880 cagtcccaca cttccttgcc tgggtgggaa ccttccaatg ttcctgcatt gtggcaggtt 2940 caatagttaa aatatgcaat acctcatttt gaattgaatt atgcagtgtt agcgaggttt 3000 ggctataggg aagagagtat aacgaaaaac catcggctcc tggtccggtg gtttttcgtt 3060 // |
|