EBI Dbfetch

ID   D50866; SV 1; linear; mRNA; STD; PLN; 1768 BP.
XX
AC   D50866;
XX
DT   20-JUL-1995 (Rel. 44, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Glycine max mRNA for beta-amylase, complete cds.
XX
KW   beta-amylase.
XX
OS   Glycine max (soybean)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids I; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine.
XX
RN   [1]
RP   1-1768
RA   Adachi M.;
RT   ;
RL   Submitted (05-JUN-1995) to the EMBL/GenBank/DDBJ databases.
RL   Motoyasu Adachi, Research Institute for Food science; Gokasho, Uji, Kyoto
RL   611, Japan (E-mail:adachi@soya.food.kyoto-u.ac.jp,
RL   Tel:0774-32-3111(ex.2732))
XX
RN   [2]
RP   1-1768
RX   DOI; 10.1074/jbc.273.31.19859
RX   PUBMED; 9677422.
RA   Adachi M., Mikami B., Katsube T., Utsumi S.;
RT   "Crystal structure of recombinant soybean beta-amylase complexed with
RT   beta-cyclodextrin";
RL   J. Biol. Chem. 273(31):19859-19865(1998).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1768
FT                   /organism="Glycine max"
FT                   /cultivar="Wasesuzunari"
FT                   /mol_type="mRNA"
FT                   /dev_stage="immature"
FT                   /tissue_type="cotyledon"
FT                   /db_xref="taxon:3847"
FT   CDS             75..1565
FT                   /codon_start=1
FT                   /product="beta-amylase"
FT                   /EC_number="3.2.1.2"
FT                   /db_xref="GOA:Q42795"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="PDB:2DQX"
FT                   /db_xref="UniProtKB/TrEMBL:Q42795"
FT                   /protein_id="BAA09462.1"
FT                   /translation="MATSDSNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRA
FT                   AGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGLTLQAIMSFHQCGGNVGDIV
FT                   NIPIPQWVLDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFR
FT                   ENMSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPGIGEFQCYDKYLKADFKAAV
FT                   ARAGHPEWELPDDAGKYNDVPESTGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDE
FT                   ANKAFLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAIL
FT                   NFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNA
FT                   RPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHADQDYCANPQKYNHA
FT                   ITPLKPSAPKIPIEVLLEATKPTLPFPWLPETDMKVDG"
FT   polyA_signal    1627..1632
FT                   /note="the other possible position of polyA_signal is
FT                   1748..1753"
FT   polyA_site      1768
XX
SQ   Sequence 1768 BP; 557 A; 360 C; 380 G; 471 T; 0 other;
     tttaccacca ttctagatat cagagaactt tgcagctctc ttaggttttt aaaaaacacc        60
     acgcaaacag caagatggcc acttccgaca gtaacatgct actaaattat gttccagttt       120
     atgtgatgct cccactcgga gttgtcaatg ttgacaatgt ttttgaagac ccagatggcc       180
     ttaaagaaca gctcttgcag cttcgagctg cgggtgttga cggggttatg gttgatgtgt       240
     ggtgggggat catagaactg aaggggccta agcagtatga ttggagagcc tacaggagtt       300
     tgtttcagct ggttcaagaa tgtggcttga cactgcaagc tattatgtca ttccatcaat       360
     gtggagggaa cgtaggagat atagttaaca tcccaattcc ccagtgggtg cttgacattg       420
     gagaatcaaa tcatgatatc ttctacacca accgctcagg aacccggaac aaggaatatc       480
     taactgttgg tgtggacaac gagcctatat tccatggaag aacagccatt gagatataca       540
     gtgactacat gaagagtttc agagaaaaca tgtcagattt tttagaatct ggacttatta       600
     tagacattga agttgggctt ggcccagcag gagagctcag atacccctct tatccacaaa       660
     gccaaggatg ggaatttcct ggtattggcg aatttcagtg ctatgacaaa tatttgaagg       720
     cagatttcaa agcagctgta gcaagggctg gccatcctga atgggaactg ccagatgacg       780
     caggcaagta caatgatgtc ccagaatcta ctggattctt caaatcaaat ggcacgtatg       840
     tcactgagaa agggaagttc ttcttgacct ggtattctaa caaattgctg aatcatggtg       900
     atcaaatact agatgaagcc aacaaagctt tcctgggctg taaagtcaaa ttagcaatca       960
     aagtatctgg aattcactgg tggtacaaag ttgaaaatca tgctgcagag cttactgctg      1020
     gatattacaa ccttaatgat agagacggat accgccccat tgcaagaatg ctgtctcgcc      1080
     atcatgccat tttgaacttt acatgtcttg agatgaggga ctcagagcaa ccctcagatg      1140
     ccaaaagtgg accacaggag cttgttcagc aggtattgag tggaggttgg agagaagaca      1200
     tcagagttgc tggagaaaat gcacttccaa ggtatgatgc cacagcttac aaccaaatca      1260
     tactgaatgc aagaccgcaa ggtgtcaaca acaatggccc tccaaaacta agcatgtttg      1320
     gagtaacata ccttcgtcta tcagatgatc tactgcaaaa atcaaatttt aatatattca      1380
     aaaaatttgt gctaaagatg catgcagatc aggattactg tgcaaaccct caaaagtata      1440
     atcacgccat aacaccattg aagccatctg caccaaagat tcccattgag gttcttctgg      1500
     aagcaactaa accaacactg ccattcccct ggcttccaga gacagacatg aaagttgatg      1560
     gttgatttcc caatttggtg ccatgagtaa ttaaataatc tgctggaaat aatatctacc      1620
     aatataaata aagcatccag ccactgtaat ctgcaatgct gataataatg ccatgaagta      1680
     gcactgccta aacatctaca aagtactctc gtgtactttt tatgtgtgta ttcctatcta      1740
     cgatgttaat aaactatttt atcaaatg                                         1768
//