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EBI DbfetchID D50089; SV 1; linear; genomic DNA; STD; INV; 7415 BP. XX AC D50089; XX DT 09-MAY-1996 (Rel. 47, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Drosophila americana americana G-3-P dehydrogenase (alphaGpdh) gene, DE exon1-8, complete cds. XX KW alphaGpdh; G-3-P dehydrogenase; glycerol 3-phosphate dehydrogenase; GPDH. XX OS Drosophila americana OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; OC Drosophilidae; Drosophila. XX RN [1] RP 1-7415 RA Narise S.; RT ; RL Submitted (07-APR-1995) to the EMBL/GenBank/DDBJ databases. RL Sumiko Narise, Josai University Faculty of Science, Biochemical Laboratory; RL 1-1 Keyakidai, Sakado, Saitama 350-02, Japan (Tel:0492-71-7961, RL Fax:0492-71-7985) XX RN [2] RP 1-7415 RA Narise S.; RT ; RL Unpublished. XX RN [3] RX DOI; 10.1007/BF01439583 RX PUBMED; 8522168. RA Tominaga H., Narise S.; RT "Sequence evolution of the Gpdh gene in the Drosophila virilis species RT group"; RL Genetica 96(3):293-302(1995). XX FH Key Location/Qualifiers FH FT source 1..7415 FT /organism="Drosophila americana" FT /sub_species="americana" FT /strain="wild" FT /mol_type="genomic DNA" FT /dev_stage="adult" FT /clone_lib="lambda DASH" FT /db_xref="taxon:40366" FT TATA_signal 1226..1231 FT exon 1258..1439 FT /number=1 FT misc_feature 1258 FT /note="transcription initial site" FT CDS join(1396..1439,1522..1699,4604..4810,4881..5253, FT 5319..5472,5542..5634,6832..6844) FT /codon_start=1 FT /gene="alphaGpdh" FT /product="G-3-P dehydrogenase" FT /EC_number="1.1.1.8" FT /note="alternative splicing" FT /note="exon1-6 + exon8" FT /db_xref="FLYBASE:FBgn0015636" FT /db_xref="GOA:Q9TYF9" FT /db_xref="InterPro:IPR006109" FT /db_xref="InterPro:IPR006168" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR011128" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017751" FT /db_xref="UniProtKB/TrEMBL:Q9TYF9" FT /protein_id="BAA20573.1" FT /translation="MAEKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEEM FT IDGKKLTEIINETHENVKYLKGHKLPTNVVAVPDLVEAAKNADILIFVVPHQFIPNFCK FT QLLGKIKPNAIAISLIKGFDKAEGGGIDLISHIITRHLKIPCAVLMGANLANEVAEGNF FT CETTIGCTDKKYGKVLRDLFQANHFRVVVVEDAEAVEVCGALKNIVACGAGFVDGLKLG FT DNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVSEAFVTS FT GKTIEDLEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFTAIHKICTNQLKPKDLI FT DCIRNHPEHMQTL" FT CDS join(1396..1439,1522..1699,4604..4810,4881..5253, FT 5319..5472,5542..5634,6247..6280) FT /codon_start=1 FT /gene="alphaGpdh" FT /product="G-3-P dehydrogenase" FT /EC_number="1.1.1.8" FT /note="alternative splicing" FT /note="exon1-6 + exon7" FT /db_xref="FLYBASE:FBgn0015636" FT /db_xref="GOA:Q9TYF8" FT /db_xref="InterPro:IPR006109" FT /db_xref="InterPro:IPR006168" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR011128" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017751" FT /db_xref="UniProtKB/TrEMBL:Q9TYF8" FT /protein_id="BAA20574.1" FT /translation="MAEKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEEM FT IDGKKLTEIINETHENVKYLKGHKLPTNVVAVPDLVEAAKNADILIFVVPHQFIPNFCK FT QLLGKIKPNAIAISLIKGFDKAEGGGIDLISHIITRHLKIPCAVLMGANLANEVAEGNF FT CETTIGCTDKKYGKVLRDLFQANHFRVVVVEDAEAVEVCGALKNIVACGAGFVDGLKLG FT DNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVSEAFVTS FT GKTIEDLEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFTAIHKICTNQLKPKDLI FT DCIRNHPEHMDTFIMPSPKL" FT CDS join(1396..1439,1522..1699,4604..4810,4881..5253, FT 5319..5472,5542..5638) FT /codon_start=1 FT /gene="alphaGpdh" FT /product="G-3-P dehydrogenase" FT /EC_number="1.1.1.8" FT /note="alternative splicing" FT /note="exon1-6" FT /db_xref="FLYBASE:FBgn0015636" FT /db_xref="GOA:Q27556" FT /db_xref="InterPro:IPR006109" FT /db_xref="InterPro:IPR006168" FT /db_xref="InterPro:IPR008927" FT /db_xref="InterPro:IPR011128" FT /db_xref="InterPro:IPR013328" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR017751" FT /db_xref="UniProtKB/Swiss-Prot:Q27556" FT /protein_id="BAA20286.1" FT /translation="MAEKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEEM FT IDGKKLTEIINETHENVKYLKGHKLPTNVVAVPDLVEAAKNADILIFVVPHQFIPNFCK FT QLLGKIKPNAIAISLIKGFDKAEGGGIDLISHIITRHLKIPCAVLMGANLANEVAEGNF FT CETTIGCTDKKYGKVLRDLFQANHFRVVVVEDAEAVEVCGALKNIVACGAGFVDGLKLG FT DNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADLITTCYGGRNRRVSEAFVTS FT GKTIEDLEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFTAIHKICTNQLKPKDLI FT DCIRNHPEHM" FT intron 1440..1521 FT /number=1 FT exon 1522..1699 FT /number=2 FT intron 1700..4603 FT /number=2 FT exon 4604..4810 FT /number=3 FT intron 4811..4880 FT /number=3 FT exon 4881..5253 FT /number=4 FT intron 5254..5318 FT /number=4 FT exon 5319..5472 FT /number=5 FT intron 5473..5541 FT /number=5 FT exon 5542..>5638 FT /number=6 FT intron 5635..6831 FT /number=7 FT /note="four 3'terminal nucleotides of exon6, 'gtaa', are FT included in intron7 by alternative splicing" FT intron 5635..6246 FT /number=6 FT /note="four 3'terminal nucleotides of exon6, 'gtaa', are FT included in intron6 by alternative splicing" FT polyA_signal 5971..5976 FT exon 6247..>6280 FT /number=7 FT polyA_signal 6574..6579 FT exon 6832..>6844 FT /number=8 FT polyA_signal 7085..7090 XX SQ Sequence 7415 BP; 2445 A; 1350 C; 1276 G; 2344 T; 0 other; ggtacctcgc ttgaataatt taaatgacat taaataatgg gatgggatgg gacgatatga 60 agcatctatt ttaggtattg ctgcttaatg tttgaggttt gttgcatccc agcagcctca 120 taatgacaga aactccttga acggatgcat cacccagata taaaatgcca acgtaagcac 180 tttcacccgc ttggccaatt gcttttatgg ccccttctat acgaatgtaa gccatgcatt 240 aacatgactg agttctatgg ctgagaccct aagatcgata ctgttgctgc tcggattgga 300 aattatataa gagaagctat gagatttaaa atagaacttc attgatcgca gagaacccgc 360 cgattgtcat atgccaccaa ggagcagcta aacttagatt gtttttaaca catccgtttt 420 gttcgtcttc ttggcgaaaa ttgtttggga atcgactttt taaactatgg cataagttat 480 tcattttaat gaacttaata gcagtaacta atttgtaaag ttgtgtaaca tgtgaccaaa 540 gccgtaaaac acaaacgtaa gcaaatctca aaaatgttaa taagaaaatt tgaatttcgc 600 gcgcagttaa cagtgagtta acagcattta acttaacagt tcatatgagc ataagggagc 660 gtgttaacta accaaaaata attatgtttt caatatattc aaacttattt ctactgtcgg 720 aagtgaaaaa aactattttg cacattgcat ttttaaattt attataattt aaatcaattg 780 aaaggaaaaa aaaagaaacg ataacaaatc agctgttcaa tgcaaaatca aaacaaacaa 840 aggcaatgga aatccatgct cataaataga acaaattcag cagaaatctt ttggagaata 900 tatttttaaa acattaagca cattttttta taaattaact tttccccaaa cacaattatt 960 aatcgtaagc agctgttcgc gccatttttc aaaccaaaaa gcagtacaga aaattaataa 1020 taaaaactgc aaattttgta tgatttcatt ataagctaat ctttcgctta tttgtgaagc 1080 aaaaacaaac ttaaaatatt tattcgaaac atgccaattg atgcgtaaca ttcgatttct 1140 cgatacacac tatcgctagg caatcaataa tgttatcgat atgtgtatcg tatcgtagtc 1200 ttgcaaatac gcgtttactg aatagtattt attaaatgtg ccgtggcttc gacgtgtcag 1260 ttcgtagtta ataattcgct gagcttgtcg catataccaa gagtctgaca cgcgtacaaa 1320 tcaatcgaca gagttgaaaa cactttgcca tacaacaaca gcaacaacga aaacaacaat 1380 aattaataca gcagcatggc ggaaaaggta aatgtttgca tcgtgggctc tggcaactgg 1440 tgagtgcatt aaaaacaata acaatatcat tagttatata ataattgcat attgcacctt 1500 ggcattttga accttgtgca ggggttcggc catagcgaaa atcgtgggcg ccaatgcggc 1560 cgcgctgccc gagtttgagg agcgcgtcac aatgtttgtc tacgaggaga tgattgatgg 1620 caagaagtta acggaaatta tcaatgaaac gcacgagaat gttaaatacc tgaagggaca 1680 caaactgcca acaaatgtgg tgagtacaaa aagagcgcaa agtcatatat aactgtggcg 1740 gctaactgtt aattaaaatc atcaacataa aaaaatgtgt gaaaaaaaaa ccgcctctac 1800 tgttatacaa ttgattagta ttagttttag tgcaattatt aacaaatgca gcgacgtctg 1860 ctgcagctgc cccttacata aaagacgccg ctgccttgat cttggccgtc gtatttacat 1920 caaattatct aatcagacga atgcgcggac gtactgacgg gacatgcaca tgcagctatt 1980 tttacaactc acttcgcgca ctctctctct ctctcgctct cacacactct tggccaacgc 2040 tgcacttttt tttttgtcag ggccaataac aacaacaaaa acagtttcgc cttgctctga 2100 cgtctgcaca caaacgaaac cttctgccaa gctggcagtg acatttctgc cgctgtgtct 2160 ttgacgtagg tcaaggccgg cttgacgtgc gcgcctcgca ctctcttatg cgttctctct 2220 taattgttgt gcgcttggct taacctaaga gaaacttata gcacagtcga cagcaactgt 2280 aacagttaga cagatcaatg ttgttctaat acatttatac agaaatgcac acatacataa 2340 caacaatttg cacagctgaa ctgataagag gagcaacttg actgtttgta ttcacttgat 2400 tatagataag ccgctttatt agcaggtcat gttaaacacg ctattttagt tgtttcgata 2460 aggtaccgac taatagatat gtaatggcct gtactacatt tcgattcgga ttgaaaggca 2520 ataacaagta catttcgact tgttttcgtt atgttcgaaa cattttcgaa tagtttttta 2580 tgatgtttaa tgaaataaaa atgatttata ttgccaatat ctaccaaatc ggactattta 2640 agacgtctag atttgtttgg atacaatata tttaattatt aattaaatgg aaattttccg 2700 tgcgagctaa ttcagctaat ttatcagtag aattttagga tttcgactag aacagctgtc 2760 actgcagcat tgataaaaga gaaaaacaaa ttaaatcgtt tctatgtctg ttcctattgt 2820 gtttctatat aattttacgc cagcgcggct agctatatgt gtgcataccc acatatatac 2880 caaaatttat atagctatgc tttttggcaa actttcaata gtgaaagcaa aaacaaaaac 2940 ttattttttt tatgtagctt ataaacaaac aaccatgggc caatgtcaaa aatgcaggca 3000 aatatgcaaa gcatttgtca aatcaaaagt taaacgactt aaaaatgttc ttttttttta 3060 caaatgcctt tctctagttg cctgataagg gaaatagtag aaaatcaagt aaaatattgt 3120 agcggaaaat gattgagttt tctgataaca atttgtttgt tttctaatct atttttatac 3180 ccttatactt ttgacatgat gtgtgtcatg cattggagga aagcatgttc taccctataa 3240 caaaatatat gtatttggaa ttataatttg ggcaaatatt tggaatatca atgtggaaac 3300 tttactttaa atagaaattt gaattacgca tcaaaataca acagctttct catacaaatt 3360 cacaaatgtt tagtctatca ttaactcaat ttcctattaa aataattaaa ttatgtgtca 3420 tttcgatgaa agatagttcg tatttattat gcacatgatt agaggtgggt ttcacaatta 3480 tttatgtgac tttaaacaca attaaggttt tgcacagttg attatcaaca acaagtgcaa 3540 atgatgaact ttttacaggc aaacgaattg atgaattgca tttagttcca acctattaaa 3600 ctttgtgctt gtcgctttcg ttatggaaaa tgttttcgca ataacaaaac aaaaagctaa 3660 ttttgcacgt tttataccct aaaatgtata aaaaacaatt gggtataatg tttcggtaca 3720 catgtatgta acaggcgaat caggaatcag attccgccta gatatgtgcc tctagaggaa 3780 cgtgctgtga tcttaaacta taatacaaag gctaaaaaca agcctaacgc ggggtctata 3840 agagataaga catactatat ttaatatttg catcatgttg tatatggtta cgctttgtta 3900 tgcgtattgt attgctcgac atatttaagt actgaaaatc tcataaggat ctgactataa 3960 acagcgcagt tattaaagaa cgcagtttct ataatatgag gctgacaaaa gaagaagcac 4020 aaccacaaca tatgttcgct agacttggaa ctagcgcact cttgttaaaa gtaattggct 4080 ttctttttaa gattgttaaa tatgtataca tttaaagtcc aaatattagc agagtttggg 4140 ttttttttgc tcaaaaactg gttttcttat ctacagcgaa tataaatcgc aaaaagaaag 4200 acataatatg cgagatagat atctcgcctg aactttatac cacaagtgta agccttatat 4260 aactcttata aacaagtttc caacacaagt ttgtacaagc cgattgataa ttaattcaaa 4320 tgagcaaatg agttttgcca gggtccagtt gagagacaag cctctaaaat ggaatgcacg 4380 tgcatttcaa gtgatttccg tagagatttc aaagtttcct tcattcaacc ttgagcattg 4440 tgtttggttt gttctattgg ccgcttatca gagtaacttt ggccgcttat cggaacattc 4500 gcttggcgtt tttattgatg cacacacaca cacacacaaa cacacctttc gcatttagtt 4560 tgtttaagtt ttctctcgct ctgtctctct ggttttttta taggttgccg tacctgatct 4620 ggttgaggct gccaagaatg ccgatatact gatctttgtg gtgccacatc agttcatacc 4680 aaatttctgc aaacaattgc tgggcaagat caagccaaat gccattgcca tatccctgat 4740 caagggcttc gataaggccg agggcggcgg cattgatctg atatcgcaca ttattacccg 4800 ccatttgaag gtaagcccca atttgagaag atgatcttat gcaatcgtta gctaatcttg 4860 cttctattat ctacaatcag ataccatgcg ccgtgctgat gggcgctaat ctggccaacg 4920 aggtggccga gggcaacttt tgcgagacga caatcggctg cacggacaaa aagtacggca 4980 aggtgctgcg tgatctcttc caggccaatc attttcgtgt cgtggtcgtt gaggatgccg 5040 aagccgttga ggtttgcggt gccctgaaga acattgttgc ctgtggtgcg ggctttgtcg 5100 atggtctcaa gctgggcgat aatactaagg cagcggtcat tcgtttgggt cttatggaaa 5160 tgatacgctt tgtcgatgtc ttctatccgg gcagcaaatt gtccacattc tttgagagct 5220 gcggtgttgc ggatctcatc acgacgtgtt acggtgaggc gtcccgggaa tgaatgatat 5280 gaatgcacat ctttaattca tgtgcaaaca tttttcaggt ggccgcaatc gtcgtgtctc 5340 cgaggctttt gtcacatctg gcaagacaat tgaggatctg gagaaggaga tgctcaatgg 5400 ccagaaattg cagggcccgc ccactgccga ggaggttaac tatatgttga aaaacaaagg 5460 cctggaggat aagtacgtac cactttgtat atccaagcta aaatcgtatt taactaaatg 5520 tttatattac tatacttgca gattcccatt gttcaccgcc atacacaaaa tttgcacaaa 5580 tcagcttaag cctaaagatt taatcgattg catacgcaat catcccgagc atatgtaagt 5640 gttgagtttc ttctttattt tgtttgtttg ctttttgcac agctgcacat gatatctcca 5700 agagttccgt attactttcc cgtaaatccc ttcctgtcta tgcctacgcc ccacacacac 5760 gaacacacaa ccttttgagt tttcccgtat tttgtgttta atttgcaatt gaatttcctt 5820 tcttgtaaca acaaatttat gttaattttt tgtttttact tatgcctata tatatttagt 5880 tttatgcact cctaaataac ttttagcatg ttttgttgat ttaatatata cttttgaata 5940 agttaacttt tgatataaca aaatatgaaa aataaaactc aaacaaaatt ctaaattttc 6000 aaaattgtaa aatactttca aaaaaacttt ttaatcatat atatttttct tttagaaatt 6060 atcgctcatt cccaattcct attcatagta gctcatacat ataaacccta catctaatcc 6120 caatccacct aatagaacct gcatatcatg tacatttcta aaaaaaaaaa caaaaaaaac 6180 gacttttatg tttcatcaac aaaacaattt gttttcttct cttctttttt atatgatttc 6240 tcatagggat acgttcatca tgccgtcgcc aaaactctaa actgtgttac accaaaacaa 6300 atgttctaaa agtttaattc gattgtaaat actatttgtt tatatatcaa gtcaagtcaa 6360 gtcatacact caatattatc atgcacacac gcacacacac acgcatttgc aaccgatacg 6420 tagtcgaaaa tcgtttcctt cgccaagctc aacacgcatt ttataattct aatcgattct 6480 atttaaaatg gttttcaaaa accgcccaat ttgtttttac caatgtatgt gttcataggt 6540 gaaaatgtca gtgtcatata tttgttaaac atgaatacat gtacatatca aaagaaaaaa 6600 cgcataatta ggaaaaatac ttatttttga aatgaaacat attttttgaa gaaattggca 6660 gctatacaaa tcggcagcga gcagtacgta tcaaaatttg atatattatt aattaattga 6720 attttacgtt atttgtttaa ctcacgtttg tatttgaatg caatttgaaa tgttacgctt 6780 attaaagcca agcactttta taaataatga gttttgtttt ctattccgca ggcaaacttt 6840 gtaaaatata ttaatacaca aatttctaaa cgtttttatg caccaaaaac aaataagaaa 6900 acacgagcaa atagtcattt tttcagcaca cattttaata tcctcagacg ccagccaacg 6960 acaagaatgg catatacata ggttgttaat ttattgttaa aatccggcgc atatccagcg 7020 aaccacagaa acgaacaaaa accaatcttg aagtctgctt tttgttttag cttagtttat 7080 aaacaataaa ttagcaaatg aaattgtgcg catgtaccta aagacaattg taaatcaatt 7140 ttacaattac aattgaaaac aacagaagag gcgtaataaa cgaaacaaca atggtttaat 7200 ttaaaaatta acaactaaga catacggaat tttatttgca ttagttaatt ctactgcaat 7260 ctaaagtcat aaataaaatg taaaataaaa aatgtgttaa ataaacaaaa gacaaaaaaa 7320 gtactctaca tttattttgg aatagatttt ataaaggccg cagagagtgt ttgaaccgaa 7380 ccgacttgat gcagatccgt tgacctgcag gtcga 7415 // |
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