spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D50085; SV 1; linear; mRNA; STD; PLN; 1408 BP.
XX
AC   D50085; S78381;
XX
DT   05-JUL-1997 (Rel. 52, Created)
DT   11-FEB-2005 (Rel. 82, Last updated, Version 4)
XX
DE   Cucumis sativus mRNA for NADPH-protochlorophyllide oxidoreductase, complete
DE   cds.
XX
KW   NADPH-protochlorophyllide oxidoreductase.
XX
OS   Cucumis sativus (cucumber)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids I; Cucurbitales; Cucurbitaceae; Cucumis.
XX
RN   [1]
RP   1-1408
RA   Takamiya K.;
RT   ;
RL   Submitted (07-APR-1995) to the EMBL/GenBank/DDBJ databases.
RL   Ken-ichiro Takamiya, Tokyo Institute of Technology, Faculty of Bioscience
RL   and Biotechnology, Department of Biological Sciences; Nagatsuta 4259,
RL   Midori-ku, Yokohama, Kanagawa, 226, Japan
RL   (E-mail:ktakamiy@bio.titech.ac.jp, Tel:045-924-5737, Fax:045-924-5805)
XX
RN   [2]
RX   DOI; 10.1006/bbrc.1995.1662
RX   PUBMED; 7755605.
RA   Kuroda H., Masuda T., Ohta H., Shioi Y., Takamiya K.;
RT   "Light-enhanced gene expression of NADPH-protochlorophyllide oxidoreductase
RT   in cucumber";
RL   Biochem. Biophys. Res. Commun. 210(2):310-316(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1408
FT                   /organism="Cucumis sativus"
FT                   /strain="Aonagajibai"
FT                   /mol_type="mRNA"
FT                   /dev_stage="early stage of greening"
FT                   /tissue_type="cotyledons"
FT                   /db_xref="taxon:3659"
FT   CDS             41..1237
FT                   /codon_start=1
FT                   /gene="NPR"
FT                   /product="NADPH-protochlorophyllide oxidoreductase"
FT                   /EC_number="1.6.99.1"
FT                   /db_xref="GOA:Q41249"
FT                   /db_xref="InterPro:IPR002198"
FT                   /db_xref="InterPro:IPR002347"
FT                   /db_xref="InterPro:IPR005979"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q41249"
FT                   /protein_id="BAA21089.1"
FT                   /translation="MALQAASLVSPALSIPKEGKSSVCLKDSSLFGISFSDHLKSEFSS
FT                   STLRCKRELNQQIGAIRAQTTATESPAVNKATPDGKKTLRKGSVVITGASSGLGLATAK
FT                   ALAETGKWHVIMACRDFLKAERAAKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGR
FT                   PLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSSYPSKRLI
FT                   IVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLKSSMIDGGEFDGAKAYKDSKVCNM
FT                   LTMQEFHKRYHEETGITFASLYPGCIATTGLFREHIPLFRILFPPFQKFITQGYVSEDE
FT                   AGKRLAQVVSEPSLTKSGVYWSWNKNSASFENQLSQEASDAEKARKVWELSEKLVGLA"
FT   transit_peptide 41..277
FT   transit_peptide 41..229
FT   polyA_signal    1388..1393
FT   polyA_site      1408
XX
SQ   Sequence 1408 BP; 374 A; 292 C; 332 G; 410 T; 0 other;
     tcaatttttt gctctcttgt tgttccttct ttttcttcta atggctctcc aagctgcttc        60
     attggtttcc cctgctctct ctattcctaa agaggggaag tctagtgtat gcttgaaaga       120
     ttctagtttg tttgggattt cattctcaga ccatctcaaa tctgaattca gttcatctac       180
     tttgaggtgt aagagagaat tgaaccagca aattggtgca ataagggctc agacaaccgc       240
     taccgaaagt ccagcagtta acaaagctac tccagatggg aagaaaactc tcagaaaggg       300
     tagtgttgtg atcactggag cctcttctgg gttgggatta gccacagcca aggctttggc       360
     tgaaactgga aaatggcatg tcattatggc ttgtagagac tttctcaagg ctgaaagagc       420
     tgctaaatct gcgggcatta ccaaggaaaa ctacactgtt atgcatttgg accttgcctc       480
     gctagacagc gttcgccagt ttgttgacaa cttcaggcag tctggcaggc cgcttgatgt       540
     gctggtgtgc aatgctgctg tttacctacc aactgctaaa gagcctactt tcactgctga       600
     aggttttgaa cttagtgttg gaactaacca tcttggtcat ttcctccttt cccgtttgtt       660
     attagaggat ttgaacaaat ccagttaccc ctcaaaacgg ctcatcattg tcggatcaat       720
     taccgggaac acaaatacct tggctggaaa tgtgcctcct aaggccaacc ttggtgacct       780
     tagaggactc gctggaggac taaacggcct aaaatcttca atgatcgacg gtggtgagtt       840
     tgatggggcc aaggcataca aggacagcaa agtatgcaac atgctcacta tgcaagagtt       900
     ccacaagcga tatcacgagg aaaccggcat aacatttgct tccctctacc ccggatgcat       960
     tgctacaact ggtttgttca gagagcacat tcccttgttc agaatacttt tccctccatt      1020
     ccagaagttc atcacccaag gctatgtttc agaagatgaa gcaggaaaga gactagctca      1080
     ggttgtgagt gagccgagct tgacaaaatc aggtgtgtat tggagctgga acaagaactc      1140
     ggcttcattt gagaaccagt tgtctcagga agcaagtgat gcagagaaag ctcggaaagt      1200
     gtgggagttg agtgagaaac ttgttggttt ggcttaaaat gtgaagcttg aagttcttat      1260
     gaatggtctt tccattgcta aaactgaaag ctcaattgtg agttgcggga gttcgtaact      1320
     gtgatgttgt gttgtgtaaa caaattttct gttgtaaaag tagttggttg acttgagttt      1380
     agtcgttaat aaaactctca acgttccc                                         1408
//
spacer
spacer