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EBI DbfetchID D49362; SV 1; linear; genomic DNA; STD; PRO; 3117 BP. XX AC D49362; XX DT 20-FEB-1995 (Rel. 42, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 9) XX DE Paracoccus denitrificans genes for beta-ketothiolase and acetoacetyl-CoA DE reductase, complete cds. XX KW acetoacetyl-CoA reductase; beta-ketothiolase; phaA; phaB. XX OS Paracoccus denitrificans OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; OC Rhodobacteraceae; Paracoccus. XX RN [1] RP 1-3117 RA Ueda S.; RT ; RL Submitted (15-FEB-1995) to the EMBL/GenBank/DDBJ databases. RL Shunsaku Ueda, Faculty of Agriculture, Utsunomiya University, Department of RL Bioproductive Science; 350 Mine-machi, Utsunomiya, Tochigi 321, Japan RL (Tel:0286-49-5475, Fax:0286-49-5401) XX RN [2] RP 7-236, 2472-3111 RA Ueda S.; RT ; RL Unpublished. XX RN [3] RP 1-6, 237-2471, 3112-3117 RX DOI; 10.1016/0378-1097(95)00341-2 RX PUBMED; 8566717. RA Yabutani T., Maehara A., Ueda S., Yamane T.; RT "Analysis of beta-ketothiolase and acetoacetyl-CoA reductase genes of a RT methylotrophic bacterium, Paracoccus denitrificans, and their expression in RT Escherichia coli"; RL FEMS Microbiol. Lett. 133(1-2):85-90(1995). XX FH Key Location/Qualifiers FH FT source 1..3117 FT /organism="Paracoccus denitrificans" FT /mol_type="genomic DNA" FT /db_xref="taxon:266" FT CDS <1..305 FT /codon_start=3 FT /transl_table=11 FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q51707" FT /protein_id="BAA08356.1" FT /translation="AGLLFRRPDHRAALEIAQHRRPAQLNPIHPAVEMPAAAMVTGGAL FT ARGPERWRTISRPTGRPARIGLAGVTTTRLAGLRERAPKPRGHAAYWQQHSIKSA" FT RBS 362..370 FT CDS 377..1552 FT /codon_start=1 FT /transl_table=11 FT /gene="phaA" FT /product="beta-ketothiolase" FT /EC_number="2.3.1.16" FT /db_xref="GOA:P54810" FT /db_xref="InterPro:IPR002155" FT /db_xref="InterPro:IPR016038" FT /db_xref="InterPro:IPR016039" FT /db_xref="InterPro:IPR020610" FT /db_xref="InterPro:IPR020613" FT /db_xref="InterPro:IPR020615" FT /db_xref="InterPro:IPR020616" FT /db_xref="InterPro:IPR020617" FT /db_xref="UniProtKB/Swiss-Prot:P54810" FT /protein_id="BAA08357.1" FT /translation="MTKAVIVSAARTPVGSFLGSFANLPAHELGAIVLKAVVERAGIDP FT SEVSETILGQVLTAAQGQNPARQAHIKVGLPRESAAWVINQVCGSGLRTVALAAQQVLL FT GDARIVVAGGQESMSLAPHAAYIAPGQKMGDMKMLDTMIKDGLWDAFNDYHMGTTAENV FT AGKWEISRAEQDQFAVASQNKAEAAQKAGKFADEIVPVTIKSRKGETVVDADEYIRHGA FT TLEAMENVRPAFSKEGTVTAGNASGLNDGAAAVLVMTEDEAARRGLTPLARIASYATAG FT VDPQIMGTGPIPASRKALEKAGWSVGDLDLVEANEAFAAQAIAVNRDMGWDPSIVNVNG FT GAIAIGHPIGASGCRILNTLLFEMQRRDAKKGLATLCIGGGMGVALCLERP" FT RBS 1623..1631 FT CDS 1638..2366 FT /codon_start=1 FT /transl_table=11 FT /gene="phaB" FT /product="acetoacetyl-CoA reductase" FT /EC_number="1.1.1.36" FT /db_xref="GOA:P50204" FT /db_xref="InterPro:IPR002198" FT /db_xref="InterPro:IPR002347" FT /db_xref="InterPro:IPR011283" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:P50204" FT /protein_id="BAA08358.1" FT /translation="MAKVALVTGGSRGIGAAISKALKEAGYTVAANYAGNDDAARAFTE FT ETGIKTYKWSVADYDACAAGIKQVEEELGPIAVLVNNAGITRDAMFHKMTPQQWKEVID FT TNLTGLFNMTHPVWSGMRDRKYGRIVNISSINGQKGQAGQANYSAAKAGDLGFTKALAQ FT EGARAGITVNAICPGYIGTEMVRAIDEKVLNEGIIPQIPVAAWAEPEEIARCVVFLASE FT DAGFITGSTHQAPNGGQFFV" FT terminator 2389..2417 XX SQ Sequence 3117 BP; 569 A; 1054 C; 1015 G; 479 T; 0 other; ctgcagggct attatttcgg cgccccgacc atcgtgccgc cctggaaatc gcccagcacc 60 gccgcccggc gcagctgaac ccgattcacc ctgcggtaga aatgcccgcc gccgccatgg 120 tgaccggcgg cgccctggcc cgcggtccag agcgatggcg gacgatttcc cgaccgaccg 180 gccggccggc gcggatcggc ctggcaggcg tcacgaccac gcggcttgcc ggcctgcgcg 240 aacgggcgcc caagcctcgc ggccatgccg cctattggca gcagcacagc atcaagtccg 300 cttgacctcg ggtaacgaaa cggcaaacag tcttcctgta accgaatatt ttcggccatc 360 tgggaaggag cccgtcatga ccaaagccgt aatcgtttcc gctgcccgca cccccgtcgg 420 cagctttctg ggatcctttg cgaacctgcc ggcgcatgag cttggcgcca tcgtcctgaa 480 agcggtcgtc gagcgcgccg gaatcgatcc ttccgaagtg tccgaaacca tcctgggcca 540 ggtgctgacc gccgcccagg gccagaaccc cgcccgccag gcgcatatca aggttggctt 600 accgcgggaa tcggcggcct gggtcatcaa ccaggtctgc ggctcgggtc tgcgtacggt 660 ggcgctggcg gcgcagcagg ttctgctggg cgacgccagg atcgtcgtgg ccggcggcca 720 ggaatccatg tcgctggcac cccatgccgc ctatatcgcg ccggggcaga agatgggcga 780 catgaagatg ctcgacacca tgatcaagga cgggctctgg gacgccttca acgattacca 840 catgggcacc acggccgaaa acgtcgccgg caaatgggaa atctcgcggg ccgagcagga 900 ccagttcgcc gtcgcctcgc agaacaaggc cgaggctgcg cagaaggccg gcaagttcgc 960 cgacgagatt gtgcccgtga ccatcaagtc ccgaaagggc gagacggtgg tcgatgccga 1020 tgaatacatc cgccacggcg ccacgctgga ggcaatggag aacgtgcgcc ccgcctttag 1080 caaggagggg acggtgacgg ccggcaatgc ctcgggcctg aacgacggcg ccgccgccgt 1140 gctggtcatg accgaggacg aggccgctcg ccgcggcctg acgccgctgg cccgcatcgc 1200 ctcctatgcg accgccggtg tggacccgca gatcatgggc accggcccga tccccgccag 1260 ccgcaaggcg ctggaaaagg ccggctggtc ggtcggcgac ctggacctgg tcgaggcgaa 1320 cgaggccttc gctgcccagg ccatcgccgt gaaccgcgac atgggctggg atccctcgat 1380 cgtgaacgtg aacggcggcg ccatcgccat cggccatccc atcggcgcct cgggctgccg 1440 catcctgaac acgctgctgt tcgaaatgca gcgccgcgac gcgaaaaagg gcctggccac 1500 gctgtgcatc ggcggcggca tgggcgtcgc cctgtgcctc gagcgcccct gacccgaaaa 1560 ggcgcccgca actatcttgc gcgccgtggc cagttcggta acacaatttc acgaccattt 1620 tcaaaggggg acgaaaaatg gcaaaagtgg cccttgtgac cggcgggtcg cgcggcatcg 1680 gcgcggcaat ctcgaaggcg ctgaaggagg ccggctatac ggtcgccgcg aattacgccg 1740 gcaatgacga tgccgcccgc gcctttaccg aggaaaccgg catcaagacc tacaaatggt 1800 cggtggcgga ttacgacgcc tgcgcggcgg gcatcaagca ggtggaggag gagcttggcc 1860 ccatcgccgt gctggtcaac aatgccggca tcacccgcga cgcgatgttc cacaagatga 1920 ccccccagca gtggaaagag gtcatcgaca ccaacctgac gggcctgttc aacatgaccc 1980 atccggtctg gtcgggcatg cgcgaccgca aatacggccg tatcgtcaac atcagctcga 2040 tcaacggcca gaagggccag gccggccagg cgaactattc ggcggccaag gcaggcgacc 2100 tgggctttac caaggcgctg gcccaggaag gcgcccgtgc cggcatcacc gtgaacgcga 2160 tctgccccgg ctatatcggc accgagatgg tccgcgccat cgacgagaag gtgctgaacg 2220 agggcatcat cccccagatc ccggtcgccg cctgggcgga gcccgaggaa atcgcgcgct 2280 gcgtggtctt cctggcttcc gaggatgccg gtttcatcac cggctcgacc catcaagcgc 2340 caaatggcgg ccagttcttc gtctgagccc ggctcccccg aacaggccaa acgcccgcga 2400 gatgtcgcgg gccgtttctc attccatggt cctggggcac gggcccgccc gcatcccgca 2460 ggtcaatgcg acaggcgcgt gatctcttcc ttgaggcgaa gtttttcctt cttcatccgg 2520 gcgatggtga ggtcatccgt gccggggctg cgatgcgcgg cctcgatggc gttcgaaagt 2580 gactgatgtt tgcggcgaag ctcctgcaca tgggattcaa ccgacattcc gtcctcctct 2640 tggattgatc gaaccaaggg attgcagcat agaatcgtca cattgtcacc gaaaattcgg 2700 cccgccgagc gaaagtgccg caccctcgcg aaaaaccgcc tgtgcggccc cggtcaggtc 2760 ttcttcatcg gcggaatgta acggttttgc atgcatgaca aagggcgaca gcagggcaag 2820 cggcgccgcg cccttgcgcg cggcgacgat gatccgcccc cttcgcgccc ctcgcgcgcc 2880 gcgaccggca ggatcgtgat cgccccgccg cggccggaag tgcggccagg atctcggcca 2940 gccgctcgtg cgctggatca gcgtcagcca gccgcccggc cgcaaccggc gcagcccggc 3000 ctcgatccac agcggcaggg gcgtggcctc gtggccgggg ggcggcggcg gccgacatcg 3060 ggcgccgcgg gccgccggtg aaatagggcg ggttggcgat cacatggtcc gaagctt 3117 // |
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