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EBI DbfetchID D38016; SV 1; linear; genomic DNA; STD; PLN; 2040 BP. XX AC D38016; D16539; XX DT 29-SEP-1994 (Rel. 41, Created) DT 08-DEC-2006 (Rel. 90, Last updated, Version 9) XX DE Beta vulgaris subsp. vulgaris mitochondrial nad9 gene, petG pseudogene, DE complete cds. XX KW . XX OS Beta vulgaris subsp. vulgaris OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; OC Caryophyllales; Amaranthaceae; Beta. OG Mitochondrion XX RN [1] RP 1-2040 RA Mikami T.; RT ; RL Submitted (20-AUG-1994) to the EMBL/GenBank/DDBJ databases. RL Tetsuo Mikami, Hokkaido University, Faculty of Agriculture; Kita 9 Nishi 9, RL Sapporo, Hokkaido 060, Japan (Tel:81-11-716-2111(ex.2442), RL Fax:81-11-716-0879) XX RN [2] RX DOI; 10.1007/BF00284703 RX PUBMED; 8246903. RA Kubo T., Mikami T., Kinoshita T.; RT "The sugar beet mitochondrial genome contains an ORF sharing sequence RT homology with the gene for the 30 kDa subunit of bovine mitochondrial RT complex I"; RL Mol. Gen. Genet. 241(3-4):479-481(1993). XX RN [3] RX DOI; 10.1007/BF00326162 RX PUBMED; 7736615. RA Kubo T., Yanai Y., Kinoshita T., Mikami T.; RT "The chloroplast trnP-trnW-petG gene cluster in the mitochondrial genomes RT of Beta vulgaris, B. trigyna and B. webbiana: evolutionary aspects"; RL Curr. Genet. 27(3):285-289(1995). XX DR RFAM; RF00005; tRNA. XX CC D16538:submitted (21-Jun-1993) to DDBJ by: CC Tetsuo Mikami XX FH Key Location/Qualifiers FH FT source 1..2040 FT /organism="Beta vulgaris subsp. vulgaris" FT /organelle="mitochondrion" FT /sub_species="vulgaris" FT /strain="TK81-O" FT /mol_type="genomic DNA" FT /clone="#449" FT /tissue_type="taproot" FT /note="common name: sugar beet" FT /db_xref="taxon:3555" FT misc_feature 108..168 FT /note="sequence homology to sugar beet coxII 5' flanking FT region" FT /citation=[2] FT CDS 211..789 FT /codon_start=1 FT /exception="RNA editing" FT /gene="nad9" FT /product="NADH dehydrogenase subunit 9" FT /db_xref="GOA:Q37787" FT /db_xref="InterPro:IPR001268" FT /db_xref="InterPro:IPR010218" FT /db_xref="InterPro:IPR020396" FT /db_xref="UniProtKB/Swiss-Prot:Q37787" FT /citation=[2] FT /protein_id="BAA07213.2" FT /translation="MDNQFIFKYSWETLPKKWVKKIEKSEHGNRFDTNTDYLFQLLCFL FT KLHTYTRFQVLIDICGVDYPSRKRRFEVVYNLLSTRYNSRIRLQTCADEVTRISLVVSL FT FPSAGWWEREVWDMFGVSFINHPDLRRILTDYGFEGHPLRKDFPLSGYVEVRYDDPEKR FT VVSEPIEMTQEFRYFDFASPWEQRNGNEG" FT misc_feature 302 FT /note="C to U change on mRNA" FT /note="RNA editing" FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT misc_feature 323 FT /note="C to U change on mRNA" FT /note="RNA editing" FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT misc_feature 509 FT /note="C to U change on mRNA" FT /note="RNA editing" FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT misc_feature 538 FT /note="C to U change on mRNA" FT /note="RNA editing" FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT misc_feature 578 FT /note="C to U change on mRNA" FT /note="RNA editing" FT /citation=[2] FT /experiment="experimental evidence, no additional details FT recorded" FT misc_feature 912..1607 FT /note="sequence homology to chloroplast DNA" FT /citation=[3] FT promoter 930..937 FT /function="putative promoter" FT /note="purine-rich motif" FT /citation=[3] FT tRNA 1017..1090 FT /pseudo FT /gene="trnP-UGG" FT /product="Pro-tRNA" FT /anticodon=(pos:1051..1053,aa:Pro) FT /note="sequence homology to chloroplast trnP gene" FT /citation=[3] FT tRNA 1264..1337 FT /gene="trnW-CCA" FT /product="Trp-tRNA" FT /anticodon=(pos:1298..1300,aa:Trp) FT /note="sequence homology to chloroplast trnW gene" FT /citation=[3] FT CDS complement(1451..1564) FT /pseudo FT /codon_start=1 FT /gene="petG" FT /product="cytochrome b6/f complex subunit 5" FT /note="sequence homology to chloroplast petG gene" FT /citation=[3] FT /experiment="experimental evidence, no additional details FT recorded" XX SQ Sequence 2040 BP; 661 A; 386 C; 410 G; 583 T; 0 other; gaattctctc ctttctaact gagttccgca cccggatcta aactagtcct cgaggagaag 60 gtagccgaaa gagcgcttct ccgagagaca tagttcgaaa tagtgcatcc catgcctttc 120 ctggttggaa aacccaaccg gtgatttccg acaagtcttt cttcattttt gagcaagaag 180 cggaactaca agaaagcttt ctttctcttt atggataacc aattcatttt caaatatagt 240 tgggagactt tacccaagaa atgggtcaaa aaaatagaaa aatcagaaca tgggaataga 300 tctgatacca atacggacta cccatttcaa ttgttgtgct ttcttaaatt gcatacctat 360 acaaggtttc aagttttgat cgatatttgc ggagttgatt atccttctcg aaaacgaaga 420 tttgaagtgg tctataattt actgagtact cggtataatt cgcgcattcg gctacaaacc 480 tgtgcagacg aagtaacacg aatatctccg gtagtcagtc tatttccatc agctggccgg 540 tgggagcgag aagtttggga tatgtttggt gtttcttcca tcaatcatcc ggatctacgc 600 cgtatattaa cagattatgg tttcgagggt catccattac gaaaagactt tcctctgagt 660 ggatatgtag aagtacgcta tgatgatcca gagaaacgtg tggtttctga gcccattgag 720 atgacccaag aatttcgcta tttcgatttt gctagtcctt gggaacaacg taacggtaac 780 gaaggataat tcggaatcag aataagtcca gtccagggga caaatcaata ggaaatgcta 840 tttgcttcgt aagaagactt ctatgaaatg aaagagtttc acgggaattg tcttgatcgt 900 cggatatcat taaaaaaaaa agaaatggca agaataattt aatatcgata gagaaaaaaa 960 aacgatctgg aaaacaggga aagggttctc cacaatgaca ctgtagacta attgaaaagg 1020 atgtagcgca gcttggtagc gcctttgttt tgggtaaaga atgtcacggg ttccaatcct 1080 gtcatcccta cctattcttt cccctgggca gtaagggggg atcgattgag atcgattcaa 1140 ttggggcata gataatctgt tatttttatg atactatata tgatagtata tgtatgcagg 1200 gtgtagtatt gggttacaaa aggaatcctt ttctttacag tcttatctat tgtgataaga 1260 aaagcgctct tagttcagtt cggtagaatg tgggtctcca aaacccaatg tcgtaggttc 1320 aaatcctaca gagcgtgatt cccttcttgt taggtcgaat tagactgaaa aaaattcact 1380 aacttgaaca gtaatctaaa tttgacctct aatccacagg aggtcaatca aaaaaatctt 1440 ttttaattaa tcaaaggtcc aactgatcac cacgtctgta ttgtaaatat gcagttacga 1500 ataatccagc caaagtaata ggaattagac ctaagacgat tccaaataga aaaacttcaa 1560 tcatttcaat tcgtttgaaa aaaaaaaaaa gaaaactcta tccttaagct tcgcataagc 1620 gacttcatac gtgtaatttc attcaaaaat cgatattgaa ttagcgaaat ccctattcca 1680 ttgcttcagc ctaccagact tatgagatat cttttttttt taagagctta acgagtactt 1740 caatcgatga actccttgct gcatcgatgc tcgagaaagc aagagcggat gagtgccaac 1800 tacaactact aatgctaatt gaagctcctt tcctgacagc gttatggcat tcaggagttt 1860 catcagcaat ggtgagagtg gcctatacta gttgcgagat aaaagtcatt cttccaaaca 1920 gcggtaatcc cgcatctgaa cctattcttc tagcatacag ctaatacagt aagaaaggca 1980 ctaagacact aatgcagcaa taagactaaa gccagaaaga aagcaggaga tgaacaaaac 2040 // |
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