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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D32065; SV 1; linear; genomic DNA; STD; PRO; 1139 BP.
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AC   D32065;
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DT   19-JUL-1994 (Rel. 40, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
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DE   Aeromonas caviae xynA gene for xylanase I, complete cds.
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KW   .
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OS   Aeromonas punctata
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales;
OC   Aeromonadaceae; Aeromonas.
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RN   [1]
RP   1-1139
RA   Suzuki T.;
RT   ;
RL   Submitted (05-JUL-1994) to the EMBL/GenBank/DDBJ databases.
RL   Tohru Suzuki, Faculty fo Agriculture, Gifu Univeristy, Department of
RL   Biotechnology; 1-1 Yanagido, Gifu, Gifu 501-11, Japan
RL   (E-mail:suzuki@cc.gifu-u.ac.jp, Tel:81-298-30-1111(ex.5426),
RL   Fax:81-582-30-1712)
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RN   [2]
RA   Kubata K.B., Suzuki T., Horitsu H., Kawai K., Takamizawa K.;
RT   "Xylanase I of Aeromonas caviae ME-1 isolated from the intestine of a
RT   herbivorous insect(Samia cynthia pryeri)";
RL   Biosci. Biotechnol. Biochem. 56:1463-1464(1992).
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RN   [3]
RP   1-1139
RA   Suzuki T., Itoh Y., Naito H., Kubata K.B., Horitsu H., Takamizawa K.,
RA   Kawai K.;
RT   "Molecular cloning of the xynA gene encoding an endo-xylanae (xylanase I)
RT   of Aeromonas caviae ME-1";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1139
FT                   /organism="Aeromonas punctata"
FT                   /strain="ME-1"
FT                   /mol_type="genomic DNA"
FT                   /clone="pOCH1"
FT                   /tissue_type="gut content of silk worm"
FT                   /db_xref="taxon:648"
FT   -35_signal      296..301
FT   -10_signal      318..324
FT   RBS             338..343
FT   CDS             353..988
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynA"
FT                   /product="xylanase I precursor"
FT                   /function="beta-1,4-endo-xylanase"
FT                   /note="Family G enzyme"
FT                   /db_xref="GOA:Q43993"
FT                   /db_xref="HSSP:1XNB"
FT                   /db_xref="InterPro:IPR018208"
FT                   /db_xref="UniProtKB/TrEMBL:Q43993"
FT                   /protein_id="BAA06837.1"
FT                   /translation="MFKFGKKLMTVVLAASMSFGVFAATSSAATDYWQNWTDGGGTVNA
FT                   VNGSGGNYSVSWQNTGNFVVGKGWTYGTPNRVVNYNAGVFAPSGNGYLTFYGWTRNALI
FT                   EYYVVDSWGTYRPTGTYKGTVNSDGGTYDIYTTMRYNAPSIDGTQTFPQYWSVRQSKRP
FT                   TGVNSTITFSNHVNAWPSKGMYLGNSWSYQVMATEGYQSSGNANVTVW"
FT   sig_peptide     353..436
FT   mat_peptide     437..985
FT                   /product="xylanase I"
FT                   /note="The deduced N-terminal sequence was verified by
FT                   amino acid sequence analysis of the authentic protein,
FT                   using the Edman degradation method. Molecular mass was
FT                   determind by MASS spectrometry"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
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SQ   Sequence 1139 BP; 316 A; 218 C; 294 G; 311 T; 0 other;
     ggatccttaa accatttcga tggatcggtg tttcgccgca gcccctaaca ccagagagcc        60
     ggagttactt gttcctgata tttcgaaagc gccttcatta ctctcgctgt tatggatctc       120
     ttgcggtgag caggacaatc ttatagagat tagtctgggg gttcaccgat atttggcgga       180
     acaaggagta cctcacattt ggcatgagga aagtggagga catgattggc ctgtgtggaa       240
     gaacgatctg tatctgtttt cgcaacgtct tttcaagtga atgtgctgaa gaacattcat       300
     atcggattct agcatcaacc aaatctatta aaatatcagg aggtattatt ctatgttcaa       360
     attcggcaaa aaattaatga ctgttgttct tgcagcttcc atgagttttg gtgtctttgc       420
     agcaacatcc agcgctgcaa cagattattg gcagaattgg acagatggtg gaggaacagt       480
     caacgccgtt aatggatcag gagggaatta cagcgtgagt tggcaaaata ccgggaactt       540
     tgttgtcggg aaagggtgga catatggcac acctaatcgg gtagtcaatt acaatgccgg       600
     tgtgttcgct ccttcaggta acggctatct caccttctat ggttggactc gaaacgcttt       660
     aattgaatat tacgtggtgg atagctgggg aacgtatcgt ccgaccggaa cgtataaggg       720
     cacggtgaat agtgatggtg gcacatatga tatctataca acgatgagat acaatgcacc       780
     ttccattgat ggtacgcaga ctttccctca gtattggagt gttagacagt ccaagagacc       840
     gactggtgtc aattctacca ttacgttcag caatcatgtg aatgcatggc cgagcaaagg       900
     gatgtacctt ggaaatagtt ggtcctatca ggtgatggca acagagggtt atcaaagcag       960
     cggtaacgca aatgtgacgg tttggtaaaa atgatgtaat gccgttcaac atctgcacct      1020
     gcatttgaat tgaattgtcc ggaacgttga ggaacgttaa tcacagacta acggacctcg      1080
     acgttgccgg attcatgctt agcaaaggag aataattgaa tgaggaagct gatatggtt       1139
//
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