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EBI DbfetchID D14030; SV 1; linear; genomic RNA; STD; VRL; 1899 BP. XX AC D14030; XX DT 29-JAN-1993 (Rel. 34, Created) DT 12-DEC-2007 (Rel. 94, Last updated, Version 5) XX DE Avian paramyxovirus 2 gene for hemagglutinine-neuraminidase, complete cds. XX KW . XX OS Avian paramyxovirus 2 OC Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae; OC Paramyxovirinae; Avulavirus. XX RN [1] RP 1-1899 RA Isode S.; RT ; RL Submitted (09-JAN-1993) to the EMBL/GenBank/DDBJ databases. RL Contact:Shinya Isode The Nisshin Oil Mills,Ltd, Research Laboratory RL Section, Medical Development Dept.; 3,1-chome, chiwaka-cho,kanagawa-ku, RL Yokohama, Kanagawa 221, Japan XX RN [2] RA Isobe S., Sugita S., Nerome K.; RT "Sequencing and expression of type2 and 4 avian paramyxovirus genes RT encoding for HN glycoproteins"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1..1899 FT /organism="Avian paramyxovirus 2" FT /strain="chick/California/Yucaipa/56" FT /mol_type="genomic RNA" FT /note="Avian parainfluenza virus type2" FT /db_xref="taxon:35302" FT CDS 77..1819 FT /codon_start=1 FT /product="hemagglutinine-neuraminidase" FT /db_xref="GOA:Q65033" FT /db_xref="HSSP:1USR" FT /db_xref="InterPro:IPR016285" FT /db_xref="UniProtKB/TrEMBL:Q65033" FT /protein_id="BAA03119.1" FT /translation="MDFPSRENLAAGDISGRKTWRLLFRILTLSIGVVCLAINIATIAK FT LDHLDNMASNTWTTTEADRVISSITTPLKVPVNQINDMFRIVALDLPLQMTSLQKETAS FT QVGFLAESINNVLSKNGSAGLVLVNDPEYAGGIAVSLYQGDASAGLNFQPISLIEHPSF FT VPGPTTAKGCIRIPTFHMGPSHWCYSHNIIASGCQDASHSSMYISLGVLKASQTGSPIF FT LTTASQLVDDNINRKSCSIVASKYGCDILCSIVIETEDEDYRSDPATSMIIGRLFFNGS FT YTESKINTGSIFSLFSANYPAVGSGIVVGDEAAFPIYGGVKQNTWLFNQLKDFGYFTHN FT DVYKCNRTDIQQTILDAYRPPKISGRLWVQGILLCPVSLRPDPGCRLKVFNTSNVMMGA FT EARLIQVGSTVYLYQRSSSWWVVGLTYKLDVSEITSQTGNTLNHVDPIAHTKFPRPSFG FT RDACARPNICPAVCVSGVYQHIWPISTATNNSNIVWVGQYLEAFYSRKYPRIGIATQYE FT WKVTNQLFNSNTEGGYSTTTCFRNTKRDKAYCVVISEYADGVFGSYRIVPQLIEIRTTT FT GKSE" XX SQ Sequence 1899 BP; 532 A; 438 C; 453 G; 476 T; 0 other; gggggcgaca gcccattcaa tgaagggtgt acactccaac ttgatcttgt gacttgatca 60 tcatactcga ggcaccatgg atttcccatc tagggagaac ctggcagcag gtgacatatc 120 ggggcggaag acttggagat tactgttccg gatcctcaca ttgagcatag gtgtggtctg 180 tcttgccatc aatattgcca caattgcaaa attggatcac ctggataaca tggcttcgaa 240 cacatggaca acaactgagg ctgaccgtgt gatatctagc atcacgactc cgctcaaagt 300 ccctgtcaac cagattaatg acatgtttcg gattgtagcg cttgacctac ctctgcagat 360 gacatcatta cagaaagaaa cagcatccca agtcgggttc ttggctgaaa gtatcaacaa 420 tgttttatcc aagaatggat ctgcaggcct ggttcttgtt aatgaccctg aatatgcagg 480 ggggatcgct gtcagcttgt accaaggaga tgcatctgca ggcctaaatt tccagcccat 540 ttctttaata gaacatccaa gttttgtccc tggtcctact actgctaagg gctgtataag 600 gatcccgacc ttccatatgg gcccttcaca ttggtgttac tcacataaca tcattgcatc 660 aggttgccag gatgcgagcc actccagtat gtatatctct ctgggggtgc tgaaagcatc 720 gcagaccggg tcgcctatct tcttgacaac ggccagccag ctcgtggatg acaacatcaa 780 ccggaagtca tgcagcatcg tagcctcaaa atacggttgt gatatcctat gcagtattgt 840 gattgaaaca gaggatgagg attataggtc tgatccggct actagcatga ttataggtag 900 gctgttcttc aacgggtcat acacagagag caagattaac acagggtcca tcttcagtct 960 attctctgct aactaccctg cggtggggtc gggtattgta gtcggggatg aagccgcatt 1020 cccaatatat ggtggggtca agcagaacac atggttgttc aaccagctca aggattttgg 1080 ttacttcacc cataatgatg tgtacaagtg caatcggact gatatacagc aaactatcct 1140 ggatgcatac aggccaccta aaatctcagg aaggttatgg gtacaaggca tcctattgtg 1200 cccagtttca ctgagacctg atcctggctg tcgcttaaag gtgttcaata ccagcaatgt 1260 gatgatgggg gcagaagcga ggttgatcca agtaggctca accgtgtatc tataccaacg 1320 ctcatcctca tggtgggtgg taggactgac ttacaaatta gatgtgtcag aaataacttc 1380 acagacaggt aacacactca accatgtaga ccccattgcc catacaaagt tcccaagacc 1440 atctttcggg cgagatgcgt gtgcgaggcc aaacatatgc cctgctgtct gtgtctccgg 1500 agtttatcag cacatttggc cgatcagtac agccaccaat aacagcaaca ttgtgtgggt 1560 tggacagtac ttagaagcat tctattccag gaaataccca agaataggga tagcaaccca 1620 gtatgagtgg aaagtcacca accagctgtt caattcgaat actgagggag ggtactcaac 1680 cacaacatgc ttccggaaca ccaaacggga caaggcatat tgtgtagtga tatcagagta 1740 cgctgatggg gtgttcggat catacaggat cgttcctcag cttatagaga ttagaacaac 1800 caccggtaaa tctgagtgat gcatcaatcc taaattggaa tgaccaatca aaagctacgt 1860 agtgtctaac agcattgcga agcctggttt aagaaaaaa 1899 // |
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