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EBI DbfetchID D10701; SV 1; linear; genomic DNA; STD; PRO; 2354 BP. XX AC D10701; D01111; XX DT 13-JUL-1992 (Rel. 32, Created) DT 20-FEB-2008 (Rel. 94, Last updated, Version 8) XX DE Bacillus alcalophilus ndh gene for NADH dehydrogenase alpha-2 subunit, DE complete cds. XX KW . XX OS Bacillus alcalophilus OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-2354 RA Oshima T.; RT ; RL Submitted (24-JUL-1991) to the EMBL/GenBank/DDBJ databases. RL Contact:Tairo Oshima Tokyo University of Pharmacy and Life Science, School RL of Life Science; 1432 Horinouchi, Hachioji, Tokyo 192-03, Japan XX RN [2] RP 1-2354 RX PUBMED; 1917890. RA Xu X., Koyama N., Cui M., Yamagishi A., Nosoh Y., Oshima T.; RT "Nucleotide sequence of the gene encoding NADH dehydrogenase from an RT alkalophile, Bacillus sp. strain YN-1"; RL J. Biochem. 109(5):678-683(1991). XX FH Key Location/Qualifiers FH FT source 1..2354 FT /organism="Bacillus alcalophilus" FT /strain="YN" FT /mol_type="genomic DNA" FT /db_xref="taxon:1445" FT CDS <1..507 FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /note="ORF" FT /db_xref="GOA:P26830" FT /db_xref="InterPro:IPR000866" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR017559" FT /db_xref="InterPro:IPR017936" FT /db_xref="UniProtKB/Swiss-Prot:P26830" FT /protein_id="BAA01544.1" FT /translation="EFIEVSEESFKGQWSVLCFYPADFTFVCPTELEDLQNEYAALKEL FT GVEVFSASTDTHFTHKGWHDSSETIGKITYAMIGDPSQTLSRNFDVLNEVSGLADRGTF FT IIDPDGVVQAAEINAEGIGRDASTLVNKIKAAQYVRNNPGEVCPAKWQEGDETLKPSLD FT LVGKI" FT RBS 505..513 FT CDS 520..2079 FT /codon_start=1 FT /transl_table=11 FT /gene="ndh" FT /product="NADH dehydrogenase, alpha-2 subunit" FT /db_xref="GOA:P26829" FT /db_xref="InterPro:IPR000103" FT /db_xref="InterPro:IPR001327" FT /db_xref="InterPro:IPR002109" FT /db_xref="InterPro:IPR008255" FT /db_xref="InterPro:IPR012081" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="InterPro:IPR013027" FT /db_xref="UniProtKB/Swiss-Prot:P26829" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="BAA01545.1" FT /translation="MVLEPQIKSQLNQYLQLMEGDVLLKVSAGNDKVSEDMLSLVDELA FT SMSSRITVEKTNLERTPSFSVNRPGEDTGIVFAGIPLGHEFTSLVLALLQVSGRAPKAE FT QNVIDQIKNIEGEYHFESYISLSCQNCPDVVQALNLMSVLNPGISHTMIDGAAFKDEVE FT SKDIMAVPTVYLNGESFTSGRMTVEEILAQLGSGPDASELADKDPFDVLVVGGGPAGAS FT SAIYAARKGIRTGIVADRFGGQIMDTLSIENFISQKYTEGPKLAASLEEHVKEYDIDVM FT KLQRAKRLEKKDLIEIELENGAVLKSKSVILSTGARWRNVGVPGEQEFKNKGVAYCPHC FT DGPLFEGKDVAVIGGGNSGVEAAIDLAGIVNHVTVLEFMPELKADEVLQERLNSLPNVT FT VIKNAQTKEITGDDKVNGISYMDRDTEEVHHIELAGVFVQIGLVPNTDWLDGTLERNRF FT GEIVVDSHGATNVPGVFAAGDCTNSAYKQIIISMGSGATAALGAFDYLIRNTTPAESAA FT AK" FT repeat_region 2074..2102 FT /rpt_type=INVERTED FT /rpt_unit_range=2094..2102 FT /rpt_unit_range=2074..2082 FT repeat_region 2103..2144 FT /rpt_type=INVERTED FT /rpt_unit_range=2103..2120 FT /rpt_unit_range=2126..2144 FT /note="it could form a stable stem-loop structure." XX SQ Sequence 2354 BP; 692 A; 478 C; 561 G; 623 T; 0 other; gaattcatcg aggtatcaga agaaagcttt aaaggccagt ggagcgttct ttgtttctac 60 cctgcagact tcacttttgt ctgcccaaca gagcttgaag accttcaaaa tgagtatgct 120 gctttgaaag aacttggagt ggaagtattc tcagcttcta cagatactca ctttactcat 180 aaaggctggc atgacagctc tgaaacaatc ggaaaaatca cttacgctat gatcggtgat 240 ccttcacaga cactttcccg taactttgat gtactgaacg aagtgtccgg tcttgctgat 300 cgcggtacat tcatcatcga tccagacggt gtagtacaag ctgcggaaat taacgctgaa 360 ggcatcggcc gtgatgcaag tactcttgtt aataaaatta aagcagcaca atatgtaaga 420 aataaccctg gtgaagtttg cccggctaaa tggcaagagg gagacgaaac acttaagcca 480 agcctggatc tggtagggaa aatctaagga gtgctataaa tggtacttga accgcaaatt 540 aaatcacaat taaaccaata cttgcagctt atggaagggg acgtccttct taaagtaagc 600 gcaggaaatg ataaagtttc tgaggatatg ctctctcttg tcgacgaact tgcttctatg 660 tcttccagga ttactgttga aaaaactaat ctggaaagaa ctccaagctt tagtgtaaac 720 cggccagggg aagatactgg tattgtattt gctggtattc ctttagggca tgagttcact 780 tcgcttgttt tagcattgct gcaggtgagc ggaagagctc ctaaagcaga acagaatgtt 840 atcgaccaga tcaaaaatat cgaaggcgaa tatcattttg aatcttatat cagcctgagc 900 tgccaaaact gccctgacgt agtacaggca cttaacttaa tgagtgttct taaccctggc 960 atcagccata caatgatcga tggtgctgcc tttaaagatg aggtagaaag caaagacatt 1020 atggccgtgc caactgttta ccttaatggt gaatcattca cgagcggcag aatgacagtg 1080 gaagagattc ttgcacagct gggaagcggc cctgatgcat cagaattagc tgacaaagat 1140 ccattcgatg tactcgttgt cggcggcggt cctgcgggtg caagttctgc tatctatgct 1200 gcccgtaaag ggattcgcac aggtatcgta gctgaccgtt tcggcggcca gattatggac 1260 acgctgagca ttgaaaactt tatcagccag aagtacacag aaggaccaaa acttgcagca 1320 agcctggaag agcacgtaaa agaatacgat atcgatgtaa tgaaacttca gcgtgctaaa 1380 cgcctggaga aaaaagattt aattgagatc gagcttgaaa acggtgctgt tctgaaaagt 1440 aagagcgtga ttctttctac tggagcacgc tggcgcaatg taggcgtacc tggagaacag 1500 gagttcaaaa acaaaggggt agcttactgc cctcactgtg atggtcctct gtttgaagga 1560 aaagacgttg cagttatcgg tggaggtaac tctggtgtag aagctgcaat cgaccttgca 1620 ggtattgtaa accatgtgac ggttcttgag ttcatgcctg agctgaaagc tgacgaagtg 1680 ctgcaggaac gcttaaacag cctgccaaac gtcactgtaa ttaaaaatgc tcagacgaaa 1740 gaaattaccg gcgatgacaa agtaaacggt atttcttaca tggaccgcga tacggaagaa 1800 gtacaccata ttgaattagc cggggtattc gttcagatcg ggcttgtacc taacactgac 1860 tggctagacg ggactcttga acgtaatcgt ttcggtgaaa tcgtcgtaga ttctcatggt 1920 gctacaaatg tacctggggt gtttgcggca ggagactgta ctaacagtgc ctacaagcaa 1980 atcattattt ctatgggatc cggtgctaca gctgcattag gtgcattcga ttacctgatt 2040 agaaatacaa cgccagcaga aagtgctgcg gctaaataat ttaaagataa cgcaatttat 2100 ttaagaagcc acttcctatc aaaacgatag tgaggcggct tcttttttct cgtctcataa 2160 ggttttgaga tgtacaccat ggagcataag ccgtggaagt atgctttata agttcatatt 2220 attactgcat ctcttgccat tctcattggg cccattcagt tccttctgaa taaaacaagg 2280 tcccgcagac tttccataca tcgatctctg ggtaagttat atgttatagc tatagccata 2340 agtgggtgct gtgt 2354 // |
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