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EBI DbfetchID D10336; SV 1; linear; genomic DNA; STD; PRO; 1991 BP. XX AC D10336; XX DT 07-JUL-1992 (Rel. 32, Created) DT 26-FEB-2008 (Rel. 94, Last updated, Version 13) XX DE Pseudomonas sp. genomic DNA for alginate lyase, complete cds. XX KW . XX OS Pseudomonas sp. OC Bacteria; Proteobacteria. XX RN [1] RP 1-1991 RA Fujiyama K.; RT ; RL Submitted (24-JAN-1992) to the EMBL/GenBank/DDBJ databases. RL Contact:Kazuhito Fujiyama Osaka University, Faculty of Engineering, RL ICbiotech; 2-1 Yamada-oka, Suita, Osaka 565, Japan XX RN [2] RP 1-1991 RX PUBMED; 8336113. RA Maki H., Mori A., Fujiyama K., Kinoshita S., Yoshida T.; RT "Cloning, sequence analysis and expression in Escherichia coli of a gene RT encoding an alginate lyase from Pseudomonas sp. OS-ALG-9"; RL J. Gen. Microbiol. 139(5):987-993(1993). XX FH Key Location/Qualifiers FH FT source 1..1991 FT /organism="Pseudomonas sp." FT /strain="OS-ALG-9" FT /mol_type="genomic DNA" FT /db_xref="taxon:306" FT RBS 99..102 FT CDS 121..1317 FT /codon_start=1 FT /transl_table=11 FT /gene="alyP" FT /product="alginate lyase" FT /EC_number="4.2.2.3" FT /db_xref="GOA:Q06365" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/Swiss-Prot:Q06365" FT /protein_id="BAA01182.1" FT /translation="MPGDKVIMKSGEWKSQFIHFKGKGTAEKPITLTAETKGSVLLTGN FT SNLKIDGEWLVVDGLSFKNGFSLKDDVVVFTKTTTNSRLTNTSIENYNPVDKTLDYKWV FT SLYGHHNRVDHCSITGKNHQGTTLVVWLDDKPNYHQIDHNYFGPRPELGANGGETIRIG FT TSAFSMNDSYRTVQNNIFDKCDGEVEIISIKSGFNKILNNLFYECAGTVTFRHGNNSEV FT SNNYFIANNVTNSGGVRIIGENQKVYGNYLYKVAGRTLRSAISVMNAYEKPALNDYWQV FT KNADIQNNIIVGAREAFVLGSGKDNDRTLAPDGVNISNNYIINPTTLLVTQDEPKNLKM FT QNNQVEGASIVTGFVKMGNDLQMSDGIWQKKTEIKKPFWLATAIGPEWKKDHRSFIFK" FT stem_loop 1445..1465 FT stem_loop 1758..1778 XX SQ Sequence 1991 BP; 680 A; 361 C; 431 G; 516 T; 3 other; tagcagttgt gcaaaagcgg ttgaaacggg ctcaagtgct gaaaaataga aaaccaagca 60 accctaagcg aaaaaacata caccatcagc agtgcggcgg agctcagtca attaaattta 120 atgcctggtg ataaggtcat catgaaatcg ggcgaatgga aaagccagtt catccatttt 180 aaaggaaagg gcactgctga aaaaccaatt acattaactg ccgaaaccaa aggaagtgtg 240 ctgctcacgg gaaattccaa cctcaaaatt gatggtgagt ggctagtggt agatggccta 300 tctttcaaaa acgggttttc cctaaaagat gatgtggtgg ttttcaccaa aaccaccacg 360 aatagccgtt taaccaatac cagtatcgaa aattataatc ccgttgataa aactttagac 420 tataaatggg tgtcgcttta tgggcatcat aaccgagtgg atcattgcag tatcacagga 480 aaaaaccatc agggaactac tttggtggtt tggttggatg ataaaccaaa ctatcaccaa 540 atagatcata attactttgg cccaaggcca gagttgggcg caaatggagg cgaaaccatc 600 cgtataggaa caagtgcttt ttcaatgaat gattcttatc gaacggtgca gaacaatatt 660 tttgataaat gcgatggcga ggtagagatc atttcgatca aatctggttt taataaaatt 720 ttgaataacc ttttctacga atgtgcgggg acggttactt ttaggcacgg caacaattcc 780 gaagttagca acaattattt tatcgcaaat aatgtaacca atagcggtgg ggtacgtatt 840 ataggcgaaa atcaaaaagt atatggcaat tatttgtaca aagtggccgg acgaacgttg 900 cggtcggcaa tttctgtgat gaatgcctat gaaaagcccg cactaaatga ttattggcag 960 gtgaaaaatg cagatattca aaacaacatt attgtaggtg ccagagaagc ttttgtgcta 1020 ggttcgggta aggataacga cagaacattg gcacctgatg gggttaatat cagcaataat 1080 tacatcatta acccaacaac gttattggtt acccaagatg aacctaaaaa cctgaaaatg 1140 cagaacaatc aggtggaagg agctagtatt gttacaggtt ttgtgaaaat gggtaacgac 1200 ttacaaatgt cggatgggat ttggcagaaa aaaacggaga tcaaaaaacc tttctggtta 1260 gcaacggcca ttggtcctga atggaagaaa gaccatagaa gtttcatttt caagtaaccg 1320 atatttgggt aactttcgtc attttaagcg tctattccgt catttcgacg ataggagaaa 1380 tctttaagct cagaggatag ttgcacaaaa actgccccat agccccgaca gtagtgagca 1440 cgagttggca agcttagctt gccaaacgag taaaacgaat ggcgggactt tccgttggcc 1500 ccctgcacta aaaatgcgct cctaaaaatc aatacacttt taacctataa agcttaacac 1560 gaattaacac ctaaaccctt gcatgtttgt ttattagttt cgtatattta cgattatttc 1620 gtaattaact gatggagaaa ttaacacagc aagaggaaga agcaatgcta gccgtttggc 1680 aggtaggtgc tggttttatt aaagatttta tggatgccat gcccgaacca aagacaccat 1740 ataccacttt ggcatcaacg atcaaaaatt tagagcgtaa gggcttttta aagggcgaac 1800 gctatgcaaa cgcccattcg ctatagcgca aaagtaaagg aaacggatta taaaaaacgc 1860 ctttatgaat ggttttgtga acgactattt tcaaaattca tataaagaac tggttgcctt 1920 ttttgcaaas sataaaaaga ttagcgcasc gaacttaaag agataattga cctgattgag 1980 aaaccagaaa a 1991 // |
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