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EBI DbfetchID D01099; SV 1; linear; genomic RNA; STD; VRL; 3585 BP. XX AC D01099; XX DT 25-AUG-1992 (Rel. 33, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 9) XX DE Barley yellow mosaic virus RNA 2 for polyprotein, complete cds. XX KW polyprotein; proteinase; RNA 2. XX OS Barley yellow mosaic virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; OC Bymovirus. XX RN [1] RP 1-3585 RX PUBMED; 2016598. RA Davidson A.D., Proels M., Schell J., Steinbiss H.H.; RT "The nucleotide sequence of RNA 2 of barley yellow mosaic virus"; RL J. Gen. Virol. 72:989-993(1991). XX CC Data kindly submitted in computer readable form by: CC Andrew D. Davidson CC Max-Planck-Institut CC f. Zuechtungsforschung CC Carl-von-Linne-Weg 10 CC D-5000 Koeln 30 CC FRG XX FH Key Location/Qualifiers FH FT source 1..3585 FT /organism="Barley yellow mosaic virus" FT /segment="2" FT /isolate="German" FT /mol_type="genomic RNA" FT /db_xref="taxon:12465" FT CDS 156..2828 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:Q01365" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/Swiss-Prot:Q01365" FT /protein_id="BAA00884.1" FT /translation="MSTSSSRLFFDCGSLDWPNKSLFGDPTTRDVMDEHISSTWNAVIR FT RHMLAPNADAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITPENARSF FT SRFLEQLPDILGAYPTLASLYKTMLFAVRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL FT PPSWFPMKCGSVASFIALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHNHWIVNRFITV FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC FT ERVGNELVAVQDALQEPLANYTGKDLRALIINLGGLPSRHPEICYTRNIFENDNHLVWN FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSNGEYRVKEPRPVTQYRVEHDEPV FT ASGAPSAWWQVLVGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDLPPP FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL FT ELQLEARGLRFNEAGTPANLIQRGVKSSVGRALVRLTQSALLATGENFRTRMAATLERI FT AAERLNTLTAYDQRVIEMTTELLAAIKTALEVERSELTPHLANAEALLQVYNNLFSTDY FT ASASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGIPDVAAPMSNPFRAFSG FT RGHSLTTTRGAGLFRRPRV" FT mat_peptide 156..920 FT /product="proteinase" XX SQ Sequence 3585 BP; 913 A; 897 C; 780 G; 995 T; 0 other; aaaaataaaa caaccctaaa ccaaaacaaa caaaacgaaa caaacacaaa catcgcacgc 60 tcctcaggct cacaacactt gtagagtgat ttctgtcatc ctactgtttg taagctctcc 120 agcaaatcaa ctcgctcgct ctcaaattct ccaccatgtc tacttccagc tcacggttat 180 tctttgactg tggcagtctt gattggccaa ataaaagctt atttggcgac cccacaacac 240 gagatgtgat ggacgaacac atttctagca cgtggaatgc ggttattagg aggcacatgt 300 tggctcccaa cgccgacgcc gaaaccatat tgggccgtga tggtttacca tctgctcaat 360 ttgacgcgta tggagccatg ctacctagct ttatccaagc tctaaacgca ccaacaacgc 420 gtcttcgaat cagcgcaccg ctgtctaccg ccgagtccat tttgtgcgct gatgcatctc 480 acgctccttg gttgtacatg gcaaacagtg tgtgcgcata cgaggcaact catttgcagc 540 ctgtacaaac tttcatcgcc tttaacttcg cacatggtta ttgctacctc agtcttttca 600 taccactaag ctttcgcatt acccccgaga atgctcgaag tttcagtcgg ttccttgagc 660 agcttcccga cattttaggt gcgtatccaa cattggcctc actatataaa acaatgttat 720 ttgctgttag gcttttccca gaggtgctac aagctccaat ccccattatt gcaaaaaggc 780 ctggtgtgct acaattccat gttagtgatg ccagaggact gccaccttcg tggttcccca 840 tgaagtgcgg cagtgtagca tctttcatag cgcttattac caacaacctt aacagcgatt 900 tgcttaatgg gattgttggt tcaaacggtg atggtgagca ctacacaaat tggaactctg 960 ggcataatca ctggattgtg aatcgattta taacagtcaa ggatttacat agcagtttaa 1020 aatcagctct agaagttgat ttggacacag aaggtgggcg aaacgctgtt ctcgatttgc 1080 ttctagatct tggagtcact aatcttgttc gaagagagaa acgtttccca gcatatttcc 1140 agggagctga aagcgtatac ctgcttcttt catgtgaaag agttgggaac gagctggtgg 1200 ctgtgcaaga tgctcttcag gaaccattag ctaattatac tggaaaggat ttgagagctc 1260 tcatcatcaa tcttggcggt ttaccaagca gacaccctga gatttgttac acacgtaaca 1320 tctttgaaaa tgataatcac ctggtttgga attttgagtt ctaccgaata gcctcaatta 1380 cgaagaatgc acaaattgat agagatgtcc ttagctcatc catggcgaac ttatttagtg 1440 attttgtttc agagtcatca aatggtgagt acagagttaa ggaaccaaga cctgttactc 1500 agtacagggt tgagcatgat gaaccagttg ctagtggtgc cccatctgct tggtggcaag 1560 ttcttgttgg catcaccacc gccattctgg gcgcaataat attctttctt tggaggtgtt 1620 tcttgcgtgc taagcgtgtc aaattccagg caaaggattc cttcccatgg tttaccacgt 1680 ctggtgatga tgacctcccg cccccccctg gtgattcccc gtcacgccct cctgggcgca 1740 gcccggatcg agttcttcca cgtacagttg ttcgagatct cagcttcaat gatgatgatg 1800 atttacacag tgttgatctt aatgaagctg ggtcgcgttt tggggaggtt gtctctttaa 1860 ttgcaagggg aaatctccgc gagctagctg gtgcgattcc tgaatctctt agcaacttaa 1920 ctctccttca aacgagtgca agtggatctg gcttttacac tatggtggct ctgtaccttg 1980 ccactttagg ggatgctatc actgcattcc atgagcataa tgatgcttca cctgccacaa 2040 ttcaatcact gcgcacgctc gagcttcagc ttgaagcccg tggtttgcgt ttcaatgaag 2100 ctggcacacc cgcaaatctc attcagaggg gcgttaaatc ttctgttggt agagcacttg 2160 tgcgactaac acagagtgct cttctggcca ctggtgagaa ctttcggaca cgcatggcag 2220 ccacacttga aagaattgct gctgagcgcc tcaacacgtt aaccgcctat gatcagcgag 2280 tcatcgagat gacaactgaa ctcctagcag caatcaagac tgctcttgaa gtcgagcgca 2340 gtgaactcac tccacatctc gcaaacgccg aggctctgct tcaagtttac aacaatctct 2400 ttagcaccga ttatgcttca gcatcgctgc ttgctcttag acgcgagatg attcttagga 2460 gtgctgaagg gcgtgttgga gaacagccaa ctagtgcttc tgatgcggct aatgaggaat 2520 tagtccaacg ttccatgaca aagttggata aggaaattga gttattccaa gcacaaattg 2580 atagccagcg tcgcgctgtc accatcactg aagcatccaa tctcagagaa aacatattgc 2640 agccgatcaa caccgttgcg aatattgcca tggctggagc ttttctgcgt gggggcgcgc 2700 gccatcgcat gccagggata ccagatgtgg ctgcgcccat gtccaaccct tttcgagctt 2760 tctcagggag gggacattca ctcacaacaa ctcgaggtgc tggtcttttc cgacgccctc 2820 gagtttagtt tttccatcat agcactattt actttccgcc gccctagcat aatttagatc 2880 aacattatcc atttcttcct cctttcacca tctgcacacc gctgccatta atatggtaga 2940 gttagcggtt catcccccgc tacgctcaac atctccatcc ttagatcacc tgcaaacaca 3000 taaaatacca aaaataccat ttatcattct gtctcaagcg ccagcatttt aaattacccg 3060 caattgcatt atcgttttgc catcaaagta tggttcgttt catcaacatc tgctcgcatg 3120 attgggtgta tggggccagt gttgttttgg gtatggaaat tgattggtga gaattgattc 3180 ttctcaccat gagttttcca ggggataagc tcggtgctac agctagcggc tgtatccttc 3240 gcgatgcccc acaccacaaa acaccactga ttcttaggaa ttagcctttc aaatatccca 3300 actgcaatga gcacgatagc attgcatctt cactcaaggt ccggttagag tccctggcag 3360 gtgtgggcta caggagcatg tgaatgctgc tctgtcacca tctgtcgtct gcggtctcta 3420 tctagcacta cgagtgaagc cacgtcttta aatccccagc atgtttactt tatgttctgc 3480 atagaaaacg tcacatctgt gatacaaaaa catgcaatac gtgcccatca ttggtcgcgg 3540 gttgcagtct gacgaacaac aacctttgta cacaggaaat gtgac 3585 // |
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