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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   D00342; SV 1; linear; genomic DNA; STD; PRO; 916 BP.
XX
AC   D00342;
XX
DT   11-APR-1990 (Rel. 23, Created)
DT   01-OCT-2007 (Rel. 93, Last updated, Version 11)
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DE   Pseudomonas putida gene for glyoxalase I, complete cds.
XX
KW   .
XX
OS   Pseudomonas putida
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
XX
RN   [1]
RP   1-916
RA   Rhee H.I., Sato N., Murata K., Kimura A.;
RT   "Nucleotide sequence of the glyoxalase I gene of pseudomonas putida";
RL   Agric. Biol. Chem. 52:2243-2246(1988).
XX
CC   Upstream of the open reading frame, -10 and -35 like sequences were
CC   found, but the promoter activity of these regions has not been
CC   determined.  A palindromic repeat sequence of 13bp was found 33bp
CC   downstream of the termination codon, but Shine-Dalgarno sequence
CC   for ribosome binding was not confirmed upstream of the open reading
CC   frame.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..916
FT                   /organism="Pseudomonas putida"
FT                   /strain="NBRC 3738 (=IFO 3738)"
FT                   /mol_type="genomic DNA"
FT                   /note="193 upstream of glyoxalase I amino terminal end"
FT                   /db_xref="taxon:303"
FT   CDS             194..688
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /product="glyoxalase I"
FT                   /db_xref="GOA:P16635"
FT                   /db_xref="HSSP:1QIP"
FT                   /db_xref="InterPro:IPR018146"
FT                   /db_xref="UniProtKB/Swiss-Prot:P16635"
FT                   /protein_id="BAA00248.1"
FT                   /translation="MSLNDLNTLPALLPKRTLPLRNSFQPHHRARQGHREVADSIPACL
FT                   VSNWWTSDFVEAKFSLYFLALVDPATIPADDDARHQWMKSIPGVLELTHNHGTERDADF
FT                   AYHDGNTDPRGFGHICVSVPDVVAACERFEALQVPFQKRLSDGRMNHLAFIKDPMVTGS
FT                   K"
FT   repeat_region   722..733
FT                   /rpt_type=INVERTED
FT   repeat_region   742..754
FT                   /rpt_type=INVERTED
XX
SQ   Sequence 916 BP; 180 A; 289 C; 246 G; 201 T; 0 other;
     ttttttcaca gcttgtcggc catgatcaat tcagctaacg gattagcgac cccatctgcg        60
     cacacgcggg cctctaattt cgcacgtcgc cctcgtgcag gcgctttcat tttgcctccg       120
     cgctcacctc ccgtatcatg gacggcctgt cttaccgctg gcgcctgcgg gcccggcctc       180
     gtctctgagc ttcatgagcc tgaacgacct caacaccctg cctgcgttac tgcccaagcg       240
     gaccctgcca ctgcgcaatt cgtttcaacc acaccatcgt gcgcgtcaag gacatcgaga       300
     agtcgctgac tctatacccg cgtgcttggt ttcaaactgg tggacaagcg acttcgtcga       360
     agccaagttc agcctgtact tcctggcgct ggttgaccca gcgacaattc cagctgatga       420
     cgatgcgcgt caccagtgga tgaagtcgat ccctggcgta cttgagttga cgcataacca       480
     cggcactgaa cgtgatgcag acttcgccta tcacgatggc aataccgacc cgcgcggttt       540
     tggccatatc tgcgtttcgg tgcctgacgt agttgcggcg tgcgaacgct tcgaggcctt       600
     gcaggtgccg ttccagaagc gactgagcga cggccgtatg aaccatctgg cctttatcaa       660
     agacccgatg gttactgggt cgaagtgatt cagccaacgc ccttgtaagt acagctaact       720
     agcgccccgc gcataggcaa ctgcagtggg gcgcacgcgg tatacagcac aaactgctcc       780
     aacgcttgca gggcaatcac ctcaagccct gtgatgaccg gtttgcccag tgcttcggcg       840
     cggcagatca gtggtgtgcg cgcggcatcg ccacgacgtc gaagaccgct ctgccatgca       900
     atcgcggttt cgggaa                                                       916
//
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