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EBI DbfetchID CR942772; SV 2; linear; mRNA; STD; VRT; 3867 BP. XX AC CR942772; XX DT 18-APR-2005 (Rel. 83, Created) DT 04-OCT-2006 (Rel. 89, Last updated, Version 5) XX DE Xenopus tropicalis finished cDNA, clone TEgg036g05 XX KW . XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-3867 RA Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K., RA Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V., RA McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J., RA Zorn A.M.; RT ; RL Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries: RL trop@sanger.ac.uk XX CC Sanger Xenopus tropicalis EST/cDNA project. CC CC This sequence is from a Xenopus Gene Collection (XGC) library, from a CC library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted CC from eggs. EcoRI-NotI cut cDNA was then ligated into pCS107 with EcoRI at CC the 5' end and NotI at the 3' end. CC Vector: pCS107; Site_1: EcoRI; Site_2: NotI CC Host: Escherichia coli XL1-blue XX FH Key Location/Qualifiers FH FT source 1..3867 FT /organism="Xenopus (Silurana) tropicalis" FT /mol_type="mRNA" FT /dev_stage="egg" FT /clone_lib="XGC-egg" FT /clone="TEgg036g05" FT /db_xref="taxon:8364" FT mRNA 1..3848 FT /gene="aacs" FT /locus_tag="TEgg036g05.1-001" FT /product="acetoacetyl-CoA synthetase" FT CDS 42..2060 FT /gene="aacs" FT /locus_tag="TEgg036g05.1-001" FT /standard_name="OTTXETP00000002836" FT /product="acetoacetyl-CoA synthetase" FT /note="match: proteins: Q5ZLG0 Q86V21 Q9D2R0 Q9JMI1" FT /db_xref="GOA:Q28BL6" FT /db_xref="InterPro:IPR000873" FT /db_xref="UniProtKB/Swiss-Prot:Q28BL6" FT /protein_id="CAJ81897.1" FT /translation="MSDKGELMEEIMEAKVMWYPDSKKITQMDQFRNRVNRNLGLRLAN FT YNELYQWSVEFYPEFWAEFWDFSGIVYSKTYDEVIDRSKGIADVPEWFKGSRLNYAENL FT LKHKENDKIALYSAREGKENIEKVTFAELRRDVALFAAAMRKMGIKTGDRVAGYLPNCI FT QTVEAMLAAASIGAIWSATSPDFGVNGVLDRFSQIQPKLILSVESVIYNGKEHCHLEKL FT QHVVKGLPDLKKVVVIPYVLPKEKIDISKIPNSMFLDEFLATGKVGDQSPQLEFEQLPF FT NHPLYIMYSSGTTGAPKCMVHSAGGTLIKHLTEHILHGSTTSSDVIMYYTTAGWMMWNW FT LITAVATGASLVLYDGSPLVPSLNVLWDLVDRLGITILGTGAKWLAVLEDKGLKPCNTH FT SLQTLHTILSTGSPLKPQSYEYVYKHIKSNVLLGSVSGGTDIIACFMGQNVSVPVYKGE FT IQARHLGMAIEAWNEEGEAVLGESGELVCLKPLPSQPTHFWNDENGSKYQKAYFAKFPG FT VWAHGDYCKINPKTGGIVMLGRSDGTLNPNGVRFGSSEIYNIVEAFVEVSDSLCVPQYN FT KDGDERVILFLKMADKFEFSKELLKRIKDAIRVALSARHVPALILETKDIPYTISGKKV FT EVAVKQVIAGKEVPHRGAFSNPQSLDLYRNIPELQNF" FT polyA_signal 3825..3830 FT polyA_site 3848 XX SQ Sequence 3867 BP; 1188 A; 701 C; 882 G; 1096 T; 0 other; agagggatcg gctgcgcacg tacccagcac gcacactcag catgtcagac aagggggagc 60 tgatggagga gatcatggag gccaaggtga tgtggtaccc ggactcgaag aagatcactc 120 agatggatca gttcaggaac agggtgaata gaaatctggg gctccgcctg gctaactaca 180 atgaactgta ccagtggtct gtagagttct atccggaatt ttgggcagag ttttgggact 240 tcagtgggat tgtttactct aaaacatatg atgaggtaat tgatagatca aaaggaattg 300 ctgacgttcc agagtggttt aaagggagtc gcctgaacta tgcagagaac ctactcaaac 360 ataaggaaaa tgataaaatt gctttgtatt cagcaaggga agggaaagag aacattgaga 420 aagtaacgtt tgcagagctg aggcgggatg ttgctctgtt tgcagcggca atgaggaaaa 480 tgggcatcaa aacaggagac cgggttgcag gttatcttcc aaactgcatt cagactgttg 540 aagccatgct ggccgcagcg agcataggag caatatggag tgccacatct cctgactttg 600 gcgtcaatgg ggtattggac agattttctc aaattcagcc caaattaatc ttgtctgttg 660 aatctgtgat ttataatggg aaggaacact gtcatctgga gaaactccag catgtagtta 720 aagggttgcc ggacttgaaa aaggttgtcg tgattccata tgtcttacca aaagaaaaaa 780 tagatatctc aaagatccct aacagcatgt ttttggatga gttccttgca actggaaaag 840 ttggagacca gtccccacag ctggagtttg aacagttgcc ttttaatcac ccactgtaca 900 taatgtactc ctcaggcact acaggggcac ctaaatgcat ggtgcattca gcagggggaa 960 ccctcatcaa gcacttaaca gagcatattt tacatggcag taccaccagc agtgatgtta 1020 tcatgtacta tacaacggct gggtggatga tgtggaactg gctgattact gcagtggcaa 1080 ctggggcctc cttggtgctg tatgatgggt ctccacttgt tccaagctta aatgtgctat 1140 gggatcttgt ggacagatta ggaataacca tcctgggaac tggtgccaag tggctggctg 1200 tattggagga caaaggcctc aagccatgta acacacacag tttgcagact cttcatacta 1260 tactgtcaac gggatctcct ctaaaacccc aaagctatga gtatgtgtac aagcatataa 1320 agagcaatgt cctgctagga tcagtctcag gtggtacaga catcatagcc tgtttcatgg 1380 gtcagaatgt ctctgttcca gtgtacaaag gagaaataca ggccagacac cttggtatgg 1440 ctattgaagc atggaatgaa gaaggagaag ccgtgttggg ggaaagcggg gagctggtgt 1500 gtttaaaacc attaccatct cagcccacac atttctggaa tgatgaaaat ggcagcaaat 1560 accagaaagc ctattttgct aaatttccag gagtttgggc tcatggagac tactgcaaaa 1620 taaacccgaa aactggaggc atcgtcatgt tgggacgaag cgatggaacg ctgaatccaa 1680 atggggtgcg ttttggaagc tcagaaatct acaatatagt tgaagcattt gtggaagtat 1740 cagacagcct gtgcgttcca cagtacaaca aagacgggga tgagagagtc attctatttt 1800 tgaaaatggc cgacaagttt gagttcagca aagagctgct gaagaggata aaggatgcca 1860 tccgcgttgc cctttctgcc aggcatgttc cagccttgat tttagaaaca aaagacattc 1920 catacaccat cagcgggaag aaagttgagg ttgctgttaa acaggtcatt gcaggaaaag 1980 aagttccaca tcggggggca ttctctaatc cacagtcttt ggatctatac cgtaatattc 2040 ctgagctgca gaatttctaa gcactttaca tgtaaattct tcatccctat atgtacatat 2100 gcacagtata taccagtata tgtatagtaa atgttactgg gttcttttaa accagaccta 2160 tgtgcttatt ttgttgaacc cgagagctac atttttatcc atgcctgtgt gacgctccag 2220 aatattgcac gaggaagtga agaagtaata atagaaacca caacctttgg gatactgctg 2280 gtttacttaa gaaatatgta tttatcaata acagtgcaat gtgaacatga aatttgtctc 2340 agcatttcta aaacgttaat atttatgcac tacgatatag gggaattcac aaaataggag 2400 taaaccgcaa gtttacactt tatcaaaggg aagatatgcc ctgtttgcaa gtacagttta 2460 cattcagttt atttttctgt aaaacataaa tatggtgtgt gtatttatac agtagtacat 2520 atttatgttt atgggagcag ccatactgat tgctctaaag ttgtattagc ttgagggata 2580 tttattgagc tgtctcagta taggagtagt tggaaaatac tattggagta gttggaaaat 2640 gactgggcag ctctttctca ttcattatat cataaactga aaacatatat tctttacttc 2700 ctgcacatat gaaaggcata gtgaaaggca gctgcacaaa tcatttagag acactatcaa 2760 catagtctga tatatggggc cagtggaatt tgctgatttt tgttatttgc tattgttttt 2820 tctgtgtcat aacatttttc cccatagttt acatgtggtc tttcagaaat aaatctccaa 2880 actgctgcac tgcagctgtg aaactacatc tcccatcatt ccccaacagt ttatgtctta 2940 gaagaggcaa gggattgtaa ttcacaattt ggagattcct caatttctgt attgttatta 3000 atttatccaa aaatcatgtg tctattgata aatgtaaata ttgtcatatg gcacagaata 3060 tctctctacc taaatactgt aagaaaaagg ttttcgtgga gacagtgtta ctaaaagtta 3120 acgattcctg tttatgtcat tctttattat ttattgcatg aattttcaaa aaaagcccgg 3180 attcaacccg aatcccaaac caaatatggg atttggtgca tccctagttg aaactatttc 3240 aacttccatg tttatatgac aaaaagtcaa gtgatttcag gattcacttt tgtcaggaac 3300 atgaagttga tcaaattgtg ctgaaaaagg tagaaccttt tctgaatcct gaaccgaatc 3360 ctggattcgt gcatctttac ttttataaaa atgaggcaac tgaattacca agaacatttt 3420 ggggggaatt tttagttaaa ttcaaggtaa gggtgacgtc tcaacctttg atatgtgtcc 3480 tttagttttg taatctttgt aatcacatct acattacaaa ctagaaattc agaaatagtc 3540 tggtaatatc agttgcaggt taccatgagg gcaatctggg aggttgtctg ggggactagt 3600 ggcatggagc agagagtgga gctaaggtat caggggaggt ggtatggcag caccaagaga 3660 cccaaggatt tgttctgtcc ctggaaaaaa attgaaaaaa tgaaagttta ctatgcagtc 3720 ttgtagaaat cttctctccc acaagacaca gaagcactat aggagcttat ttttaggccc 3780 cctgactagt attcccagat tgggtagggt tccagacttt taaaattaaa aggacactag 3840 ggggtattaa aaaaaaaaaa aaaaaaa 3867 // |
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