spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CR942741; SV 2; linear; mRNA; STD; VRT; 1377 BP.
XX
AC   CR942741;
XX
DT   18-APR-2005 (Rel. 83, Created)
DT   04-OCT-2006 (Rel. 89, Last updated, Version 5)
XX
DE   Xenopus tropicalis finished cDNA, clone TNeu132f07
XX
KW   .
XX
OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1377
RA   Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K.,
RA   Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V.,
RA   McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J.,
RA   Zorn A.M.;
RT   ;
RL   Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries:
RL   trop@sanger.ac.uk
XX
CC   Sanger Xenopus tropicalis EST/cDNA project.
CC   
CC   This sequence is from a Xenopus Gene Collection (XGC) library, from a
CC   library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted
CC   from neurula embryos. EcoRI-NotI cut cDNA was then ligated into pCS107 with
CC   EcoRI at the 5' end and NotI at the 3' end.
CC   Vector: pCS107; Site_1: EcoRI; Site_2: NotI
CC   Host: Escherichia coli DH10B
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1377
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /mol_type="mRNA"
FT                   /dev_stage="neurula"
FT                   /clone_lib="XGC-neurula"
FT                   /clone="TNeu132f07"
FT                   /db_xref="taxon:8364"
FT   mRNA            1..1358
FT                   /locus_tag="TNeu132f07.1-001"
FT                   /product="cytochrome b5 reductase b5R.2"
FT   CDS             17..931
FT                   /locus_tag="TNeu132f07.1-001"
FT                   /standard_name="OTTXETP00000000626"
FT                   /product="cytochrome b5 reductase b5R.2"
FT                   /note="match: proteins: Q5PQA4 Q5ZHX7 Q9UHJ0"
FT                   /db_xref="GOA:Q5BJ68"
FT                   /db_xref="InterPro:IPR001709"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5BJ68"
FT                   /protein_id="CAJ83022.1"
FT                   /translation="MEISTDSNMLVALAVIGVTVLLFLIKALGSQAKKAPLTLLDPNAK
FT                   YPLPLIEKQEISHDTKKFRFGLPSQEHVLGLPVGQHVYLSAKINGSLVVRAYTPVSSDE
FT                   VKGHVDLIVKVYYKNVHPKFPEGGKMSQHLDSLKIGETIDFRGPNGLLVYKEKGKFAIR
FT                   PDKKSEPKLKVAKHVGMLAGGTGITPMLQLIRQITQDPNDNTKCSLIFANQTEDDILLR
FT                   YELETVAKSHPEQFKLWYTLDRPPQGWKYGAGFVTADMIKEHLPPPSEDVVVLMCGPPP
FT                   MIQFACQDNLTKLGYPEAGRFAY"
XX
SQ   Sequence 1377 BP; 360 A; 351 C; 338 G; 328 T; 0 other;
     cggcgtggga gcagtcatgg agatttccac agactctaac atgctggtag ccctggcagt        60
     aatcggggta actgtgttac tgttcctgat taaagcgctg ggatctcagg ctaagaaagc       120
     gccgctcact ctgctggacc ccaatgccaa gtacccacta cctctcatag agaaacagga       180
     aatcagccac gacaccaaga aattcaggtt tgggctcccc tcgcaagagc atgtcttggg       240
     gctccctgta ggtcagcatg tttacctctc tgccaagatc aatgggagcc tggtcgttcg       300
     ggcgtatacg ccggtgtcta gtgatgaagt caagggccac gtggatctga tagtgaaggt       360
     atattacaaa aacgttcatc ccaaattccc agagggaggc aaaatgtccc aacacctgga       420
     cagtcttaaa ataggggaaa caattgattt ccggggtcca aatgggcttc ttgtctacaa       480
     agagaagggt aagtttgcca tcaggccaga taagaagtcc gaaccaaagc ttaaggtggc       540
     caaacatgtc ggaatgcttg ccggaggaac tggtattaca cccatgttac agctgatccg       600
     gcagatcacc caggatccca atgataatac aaaatgctcc ctcatatttg ctaaccagac       660
     agaagacgac attttgctgc gttatgaact ggaaactgta gccaagagcc acccggagca       720
     gtttaagctg tggtatacac tggatcggcc cccgcaaggc tggaagtacg gcgctggctt       780
     tgtcaccgca gacatgatta aagagcacct accgccccca tccgaggacg tcgttgtgct       840
     gatgtgcggg cctcctccca tgatccagtt tgcgtgccag gacaacctga ccaagcttgg       900
     gtaccccgag gccggaaggt ttgcctacta gcatagaaat gacgccagag ccgtcggtgc       960
     caagggatgc cgccaagctg ccaccaatgc catggataca cggatgtttt accaaggaga      1020
     tatcagtaca gctggggtat cccgtaacat tccaatgctc aggttctgcc ccagtggtgc      1080
     cccaagggcc gtgccaagac cattcctgtt ctgttccctc tgggctctgc cctctactct      1140
     gctgggaact ttcctaattc tcacgcaact cagtgggtct ttctattatc tcaccggaat      1200
     ctggatgcac cagagcattc tgggattgtt ttaacccatt cctgggatct gatgtctgtc      1260
     tcatattacg gactctcagt cttctgtgtg gattttgttt taatagagag atacagaatc      1320
     tgccagtgtt taataaatat gagcctacgt ctacttttaa aaaaaaaaaa aaaaaaa         1377
//
spacer
spacer