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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CR942398; SV 2; linear; mRNA; STD; VRT; 1757 BP.
XX
AC   CR942398;
XX
DT   18-APR-2005 (Rel. 83, Created)
DT   04-OCT-2006 (Rel. 89, Last updated, Version 5)
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DE   Xenopus tropicalis finished cDNA, clone TGas062a14
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KW   .
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OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1757
RA   Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K.,
RA   Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V.,
RA   McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J.,
RA   Zorn A.M.;
RT   ;
RL   Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries:
RL   trop@sanger.ac.uk
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CC   Sanger Xenopus tropicalis EST/cDNA project.
CC   
CC   This sequence is from a Xenopus Gene Collection (XGC) library, from a
CC   library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted
CC   from gastrula embryos. EcoRI-NotI cut cDNA was then ligated into pCS107
CC   with EcoRI at the 5' end and NotI at the 3' end.
CC   Vector: pCS107; Site_1: EcoRI; Site_2: NotI
CC   Host: Escherichia coli XL1-blue
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FH   Key             Location/Qualifiers
FH
FT   source          1..1757
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /mol_type="mRNA"
FT                   /dev_stage="gastrula (stage 10.5-13 mixed)"
FT                   /clone_lib="XGC-gastrula"
FT                   /clone="TGas062a14"
FT                   /db_xref="taxon:8364"
FT   mRNA            1..1740
FT                   /gene="mogat1"
FT                   /locus_tag="TGas062a14.1-001"
FT                   /product="monoacylglycerol O-acyltransferase 1"
FT   CDS             90..1097
FT                   /gene="mogat1"
FT                   /locus_tag="TGas062a14.1-001"
FT                   /standard_name="OTTXETP00000002842"
FT                   /product="monoacylglycerol O-acyltransferase 1"
FT                   /note="match: proteins: Q6IEE5 Q70VZ7 Q91ZV4 Q96PD6 Q9DCL0"
FT                   /db_xref="GOA:Q28C88"
FT                   /db_xref="InterPro:IPR007130"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q28C88"
FT                   /protein_id="CAJ83751.1"
FT                   /translation="MKLEFAPINIPLARRLQTTAVFQWVFSFLLLAQCCIGIFLSLVLA
FT                   RLWLILALYVLWLYLDWETPQAGGRRWEWVRNWTVWKYFKDYFPIRLVKTCDLDPQHNY
FT                   IMGFHPHGVLVAGAFGNFCTNYTGFKELFPGLTPYLHILPFWFRCPFFREYAMCVGLVS
FT                   ATKKSVNHVLSKENGGNISIIVIGGAEESLDAHPGSLILHILKRKGFIKVAFKQGAHLV
FT                   PVFSFGENELFQQVPNPKGSFLRCVQERLQKIMGFAMPLFHARGIFQYSFGLMPYRMPI
FT                   HTVVGRPIPVKQTSHPTQEEIESLHQQYLSALRDLFEEHKERYGIPEHESLIFT"
XX
SQ   Sequence 1757 BP; 493 A; 370 C; 372 G; 522 T; 0 other;
     agggcagctc cttggaaaag ggtgactttg ctaatgaggt tacgacagtg ccttgttggt        60
     ttagcccttc attagaaact tacatgggaa tgaagcttga atttgctcct atcaatattc       120
     ccctggcccg gaggttgcag acaactgctg tgttccagtg ggtattttcc tttctgttac       180
     tagcacaatg ctgtataggg atattcctct ctctggtgct ggcaagatta tggctcattt       240
     tagcgctata tgttctctgg ctgtacctcg actgggagac cccccaggct ggaggacgaa       300
     ggtgggaatg ggtacggaac tggactgtat ggaagtattt taaagattat tttcctatcc       360
     ggcttgtgaa aacatgtgat ttagatccac agcacaacta tataatgggg ttccacccac       420
     atggagtgct tgtcgctggg gcctttggta acttctgtac taactacact ggctttaagg       480
     aactgtttcc tggcctaacc ccttacctgc acatcctgcc attctggttc aggtgcccat       540
     tcttccgaga gtatgccatg tgcgtgggat tggtgtctgc taccaagaag agtgtcaatc       600
     atgtcctgag caaagagaat ggtggcaaca tttctattat tgtcattggc ggagcagagg       660
     aatcattgga tgcccatcct ggaagtctaa tccttcacat cctgaagagg aaaggattca       720
     tcaaagtggc tttcaaacaa ggggctcatc tggtaccagt gttctctttt ggggagaatg       780
     aattgttcca gcaggtgcca aatccaaagg gatcattcct tcgctgtgtc caggagaggc       840
     ttcagaagat catggggttt gctatgccac tttttcatgc tcgaggaatc ttccagtaca       900
     gctttggcct gatgccatac aggatgccta ttcatactgt tgtgggtcgt cctatcccag       960
     taaagcaaac atcacatccc acgcaagagg aaattgaatc actccatcaa cagtacctca      1020
     gtgcattgcg agatcttttt gaggagcaca aggaaagata tggtatccct gaacacgaat      1080
     ccctcatatt cacgtgaccc tcagaaataa cttgtcatat ttcagcattc accctgtgtt      1140
     ccacagtccg acaggaacag ctgcgttacc ttaaagaaaa ggtccaaaat gttgataatg      1200
     aaatcactgt ttttgtgttt tgtaaagcat ctatctctcc atacacttta gtctcaagac      1260
     agtgtctaaa agattcatgc ttgcaaagcc ctctattttg tttgtattgc tttaggaaaa      1320
     tatactaaca ggatattacc attcagacat tttatagggg tatattgcag attgcgcttt      1380
     gcctatagaa gccattgttc tttttgtcaa aattttccct atcaccttat agttccttct      1440
     aaccatagaa gcttcacaat acaatgtctt aagggtctca cctcctagca gagtcatgtt      1500
     ctgtaattgg gggcacagtc tgagccaaag ggaatcagtg atagccaaat gcagtcaaag      1560
     gaaaacaggc aaacacataa atggtttaca gaacaagaat ataacactgt attaaacata      1620
     tccattcacc tgtattagtt taagaagata acatttatct taagttggtg tccttactgt      1680
     ataaacgaac ttacctaatt tttccttttt ggaaaaaaat aaagagcctt attgtgatat      1740
     aaaaaaaaaa aaaaaaa                                                     1757
//
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