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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CR859239; SV 1; linear; mRNA; HTC; MAM; 1224 BP.
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AC   CR859239;
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DT   12-NOV-2004 (Rel. 81, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 2)
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DE   Pongo abelii mRNA; cDNA DKFZp459A1526 (from clone DKFZp459A1526)
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KW   HTC.
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OS   Pongo abelii (Sumatran orangutan)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pongo.
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RN   [1]
RP   1-1224
RG   The German cDNA Consortium
RA   Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G.,
RA   Han M., Wiemann S.;
RT   ;
RL   Submitted (12-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL   MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY
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DR   ImaGenes; DKFZp459A1526Q.
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CC   Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research
CC   Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
CC   sequenced by BMFZ (Biomedical Research Center at the
CC   Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
CC   sequencing consortium of the German Genome Project.
CC   This clone (DKFZp459A1526) is available at the RZPD Deutsches
CC   Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
CC   Please contact RZPD for ordering:
CC   http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp459A1526
CC   Further information about the clone and the sequencing project is
CC   available at http://mips.gsf.de/projects/cdna/
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FH   Key             Location/Qualifiers
FH
FT   source          1..1224
FT                   /organism="Pongo abelii"
FT                   /mol_type="mRNA"
FT                   /dev_stage="adult"
FT                   /clone_lib="459 (synonym: pcor1). Vector pSport1_Sfi; host
FT                   DH10B; sites SfilA + SfilB"
FT                   /clone="DKFZp459A1526"
FT                   /tissue_type="cortex"
FT                   /note="vacuolar protein sorting 29 isoform 1 (Homo
FT                   sapiens)"
FT                   /db_xref="taxon:9601"
FT   CDS             51..599
FT                   /codon_start=1
FT                   /gene="DKFZp459A1526"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q5R9Z1"
FT                   /db_xref="InterPro:IPR000979"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5R9Z1"
FT                   /protein_id="CAH91419.1"
FT                   /translation="MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKES
FT                   YDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQR
FT                   QFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALEANIIPSFVLMDIQASTVVTY
FT                   VYQLIGDDVKVERIEYKKS"
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SQ   Sequence 1224 BP; 495 A; 187 C; 212 G; 330 T; 0 other;
     aggaagaggg cggcggcggt ggtggtgact gagcggagcc cggtgacagg atgttggtgt        60
     tggtattagg agatctgcac atcccacacc ggtgcaacag tttgccagct aaattcaaaa       120
     aactcctggt gccaggaaaa attcagcaca tcctctgcac aggaaacctt tgcaccaaag       180
     agagttatga ctatctcaag actctggctg gtgatgttca tattgtgaga ggagacttcg       240
     atgagaatct gaattatcca gaacagaaag ttgtgactgt tggacagttc aaaattggtc       300
     tgatccacgg acatcaagtt attccatggg gagatatggc cagcttagcc ctgttgcaga       360
     ggcaatttga tgtggacatt cttatctcag gacacacaca caaatttgaa gcatttgagc       420
     atgaaaataa attctacatt aatccaggtt ctgccactgg ggcatataat gccttggaag       480
     caaacattat tccatcattt gtgttgatgg atatccaggc ttctacagtg gtcacctatg       540
     tgtatcagct aattggagat gatgtgaaag tagaacgaat cgaatacaaa aaatcttaaa       600
     gccaggcctg tcttgatgat ttttggtttt ttttcattgt cctgttgaaa tcaagtaatt       660
     aaacatttaa gaaccacaaa attgtatcac ttttataata ttttgcagta aaatataata       720
     ccatcttctc tgttaataca taattgctcg aagcttcctg taaactataa gaatatattt       780
     agtttacagt atatggattc tacgaaaaaa tgtccacaac acagtaattg gtcacttgtt       840
     aagaaaaact tatccttgta aatatcttca aagttgatat ttggaacttt attccaaaag       900
     tagtgcatgt ggagaaagaa tctagacttt cttgtataca tttttctctt ctccagtaat       960
     aaacaattat ctttcattta tactttcttg ataacctgta tttaatttaa aaaaaaaaca      1020
     taaaaatgag gaaccaagtg aaactacgga tataaatatt aaagtggacg agatgacctt      1080
     tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1140
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa      1200
     aaaaaaaaaa aaaaaaaaaa aaaa                                             1224
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