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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CR858777; SV 1; linear; mRNA; HTC; MAM; 1921 BP.
XX
AC   CR858777;
XX
DT   12-NOV-2004 (Rel. 81, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 2)
XX
DE   Pongo abelii mRNA; cDNA DKFZp469I1039 (from clone DKFZp469I1039)
XX
KW   HTC.
XX
OS   Pongo abelii (Sumatran orangutan)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pongo.
XX
RN   [1]
RP   1-1921
RG   The German cDNA Consortium
RA   Ottenwaelder B., Obermaier B., Deutschenbaur S., Schaipp A., Mewes H.W.,
RA   Weil B., Amid C., Osanger A., Fobo G., Han M., Wiemann S.;
RT   ;
RL   Submitted (12-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL   MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY
XX
CC   Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research
CC   Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
CC   sequenced by Medigenomix (Martinsried/Germany) within the cDNA sequencing
CC   consortium of the German Genome Project.
CC   This clone (DKFZp469I1039) is available at the RZPD Deutsches
CC   Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
CC   Please contact RZPD for ordering:
CC   http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp469I1039
CC   Further information about the clone and the sequencing project is
CC   available at http://mips.gsf.de/projects/cdna/
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1921
FT                   /organism="Pongo abelii"
FT                   /mol_type="mRNA"
FT                   /dev_stage="adult"
FT                   /clone_lib="469 (synonym: pkid1). Vector pSport1_Sfi; host
FT                   DH10B; sites SfilA + SfilB"
FT                   /clone="DKFZp469I1039"
FT                   /tissue_type="kidney"
FT                   /note="histone deacetylase 3 (Homo sapiens)"
FT                   /db_xref="taxon:9601"
FT   CDS             32..1318
FT                   /codon_start=1
FT                   /gene="DKFZp469I1039"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q5RB76"
FT                   /db_xref="InterPro:IPR003084"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5RB76"
FT                   /protein_id="CAH90984.1"
FT                   /translation="MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKM
FT                   IVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFC
FT                   SRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPR
FT                   VLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVP
FT                   LRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVE
FT                   YVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHP
FT                   DVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIRDVPAGLLTYDRTDEADAEERG
FT                   PEENYSRPEAPNEFYDGDHDNDKESDVEI"
XX
SQ   Sequence 1921 BP; 450 A; 494 C; 494 G; 483 T; 0 other;
     cggaggcgcg gggcctgctc ccgccggcaa catggccaag accgtggcct atttctacga        60
     ccccgacgtg ggcaacttcc actacggagc tggacaccct atgaagcccc atcgcctggc       120
     attgacccat agcctggtcc tgcattacgg tctctataag aagatgatcg tcttcaagcc       180
     ataccaggcc tcccagcatg acatgtgccg cttccactcc gaggactaca ttgacttcct       240
     gcagagagtc agccccacca atatgcaagg cttcaccaag agtcttaatg ccttcaacgt       300
     aggcgatgac tgcccagtgt ttcccgggct ctttgagttc tgctcgcgtt acacaggcgc       360
     atctctgcaa ggagcaaccc agctgaacaa caagatctgt gatattgcca ttaactgggc       420
     tggtggtctg caccatgcca agaagtttga ggcctctggc ttctgctatg tcaacgacat       480
     tgtgattggc atcctggagc tgctcaagta ccaccctcgg gtgctctaca ttgacattga       540
     catccaccat ggtgatgggg ttcaagaagc tttctacctc actgaccggg tcatgacggt       600
     gtccttccac aaatatggaa attacttctt ccctggcaca ggtgacatgt atgaagtcgg       660
     ggcagagagt ggccgctact actgtctgaa tgtgcccctg cgggatggca ttgatgacca       720
     gagttacaag caccttttcc agccggttat caaccaggta gtggacttct accaacccac       780
     gtgcattgtg ctccagtgtg gagctgactc tctgggctgt gatcgattgg gctgctttaa       840
     cctcagcatc cgagggcatg gggaatgtgt tgaatatgtc aagagcttca atatccctct       900
     actcgtgctg ggtggtggtg gttatactgt ccgaaatgtt gcccgctgct ggacatatga       960
     gacatcgctg ctggtagaag aggccattag tgaggagctt ccctatagtg aatacttcga      1020
     gtactttgcc ccagacttca cacttcatcc agatgtcagc acccgcatcg agaatcagaa      1080
     ctcacgccag tatctggacc agatccgcca gacaatcttt gaaaacctga agatgctgaa      1140
     ccatgcacct agtgtccaga ttcgtgacgt gcctgcaggc ctcctgacct atgacaggac      1200
     tgatgaggct gatgcagagg agaggggtcc tgaggagaac tatagcaggc cagaggcacc      1260
     caatgagttc tatgatggag accatgacaa tgacaaggaa agcgatgtgg agatttaaga      1320
     gtggcttggg atgctgtgtc ccagggaatt tcttttcacc tcttggttgg gctggaggga      1380
     aaaggagtgg ctcctagagt cctggagtgg tcaccccagg gcttttgctg actctgggaa      1440
     agagtctgga gaccacattt ggttctcgaa ccagctaccc ccttttcctc tctctcccaa      1500
     ggcctgacaa tggtacctat cagggatgag aaacggacaa ggatagctat ctgggacatc      1560
     attggcagtg ggccctggag gccagtccct agaccccctt gccccttatt tcttccctgc      1620
     ttctctcgaa cccagagatt ttgagggatg aacgggtaga caaggactga gattgcctct      1680
     gacttcctcc tcctctgggt tctgacttct tcctcccctt gcttccaggg aagatgaaga      1740
     gagagggatt tggaaggggc tctggctcct taacacctga atcccagatg atgggaagta      1800
     tgttttcaag tgtggggagg atatgaaaat gttctgttct cacttttggc tttatgtcca      1860
     ttttaccact gtttttatcc aataaactaa gtcggtattt tttgtaaaaa aaaaaaaaaa      1920
     a                                                                      1921
//
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