EBI Dbfetch

ID   CR858396; SV 1; linear; transcribed RNA; HTC; MAM; 2956 BP.
XX
AC   CR858396;
XX
DT   12-NOV-2004 (Rel. 81, Created)
DT   01-MAY-2008 (Rel. 95, Last updated, Version 3)
XX
DE   Pongo abelii mRNA; cDNA DKFZp459O0432 (from clone DKFZp459O0432)
XX
KW   HTC.
XX
OS   Pongo abelii (Sumatran orangutan)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Pongo.
XX
RN   [1]
RP   1-2956
RG   The German cDNA Consortium
RA   Koehrer K., Beyer A., Mewes H.W., Weil B., Amid C., Osanger A., Fobo G.,
RA   Han M., Wiemann S.;
RT   ;
RL   Submitted (12-NOV-2004) to the EMBL/GenBank/DDBJ databases.
RL   MIPS, Ingolstaedter Landstr.1, D-85764 Neuherberg, GERMANY
XX
DR   ImaGenes; DKFZp459O0432Q.
XX
CC   Clone from S. Wiemann, Molecular Genome Analysis, German Cancer Research
CC   Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
CC   sequenced by BMFZ (Biomedical Research Center at the
CC   Heinrich-Heine-University, Duesseldorf/Germany) within the cDNA
CC   sequencing consortium of the German Genome Project.
CC   This clone (DKFZp459O0432) is available at the RZPD Deutsches
CC   Ressourcenzentrum fuer Genomforschung GmbH in Berlin, Germany.
CC   Please contact RZPD for ordering:
CC   http://www.rzpd.de/cgi-bin/products/cl.cgi?CloneID=DKFZp459O0432
CC   Further information about the clone and the sequencing project is
CC   available at http://mips.gsf.de/projects/cdna/
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2956
FT                   /organism="Pongo abelii"
FT                   /mol_type="transcribed RNA"
FT                   /dev_stage="adult"
FT                   /clone_lib="459 (synonym: pcor1). Vector pSport1_Sfi; host
FT                   DH10B; sites SfilA + SfilB"
FT                   /clone="DKFZp459O0432"
FT                   /tissue_type="cortex"
FT                   /note="hexosaminidase A preproprotein (Homo sapiens), not
FT                   fully spliced"
FT                   /db_xref="taxon:9601"
FT   CDS             join(19..1440,2125..2292)
FT                   /codon_start=1
FT                   /gene="DKFZp459O0432"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q5RC84"
FT                   /db_xref="InterPro:IPR001540"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR015882"
FT                   /db_xref="InterPro:IPR015883"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q5RC84"
FT                   /protein_id="CAH90623.1"
FT                   /translation="MASSRLWFSLLLAAALAGRATALWPWPQNIQTSDQRYVLYPNNFQ
FT                   FQYDVSSAAQPGCSVLDEAFQRYRDLLFGSGSWPRPYLTGKRHTLEKNVLVVSVVTPGC
FT                   NQLPTLESVENYTLTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIED
FT                   FPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELM
FT                   RKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSWGPGIPGLLTPCYSGS
FT                   EPSGTFGPVNPSLNNTYEFMSTFFLEVSSVFPDFYLHLGGDEVDFTCWKSNPDIQDFMR
FT                   KKGFGEDFKQLESFYIQTLLDIVSSYGKGYVVWQEVFDNKVKIRPDTIIQVWREDIPVN
FT                   YMKELELVTKAGFRALLSAPWYLNRISYGPDWKDFYVVEPLAFEGTPEQKALVIGGEAC
FT                   MWGEYVDNTNLVPRLWPRAGAVAERLWSNKLTSDLTFAYERLSHFRCELLRRGVQAQPL
FT                   NVGFCEQEFEQT"
XX
SQ   Sequence 2956 BP; 674 A; 762 C; 752 G; 768 T; 0 other;
     aggggagacc ggctggccat ggcaagctcc aggctttggt tttcgctgct gctggcggca        60
     gcgttggcag gacgggcgac ggccctctgg ccctggcctc agaacatcca aacctccgac       120
     cagcgctacg tcctttaccc gaacaacttt caattccagt acgatgtcag ctcggccgcg       180
     cagcccggct gctcagtcct cgacgaggcc ttccagcgct atcgtgacct gcttttcggt       240
     tccgggtctt ggccccgtcc ttacctcaca ggaaaacggc atacactgga gaagaatgtg       300
     ttggttgtct ctgtagtcac acctggatgt aaccagcttc ctactttgga gtcggtggag       360
     aattataccc tgaccataaa tgatgaccag tgtttactcc tctctgagac tgtctgggga       420
     gctctccgag gtctggagac ttttagccag cttgtttgga aatctgctga gggcacattc       480
     tttatcaaca agactgagat cgaggacttt ccccgctttc ctcaccgggg cttgctgttg       540
     gatacatctc gccattacct gccactctct agcatcctgg acactctgga tgtcatggcg       600
     tacaataaat tgaacgtgtt ccactggcat ctggtagatg atccttcctt cccatatgag       660
     agcttcactt ttccagagct catgagaaag gggtcctaca accctgtcac ccacatctac       720
     acagcacagg atgtgaagga ggtcattgaa tacgcacggc tccggggtat ccgtgtgctt       780
     gcagagtttg acactcctgg ccacactttg tcctggggac caggtatccc tggattactg       840
     actccttgct actctgggtc tgagccctct ggcacctttg gaccagtgaa tcccagtctc       900
     aacaatacct atgagttcat gagcacattc ttcttagaag tcagctctgt cttcccagat       960
     ttttatcttc atcttggagg agatgaggtt gatttcacct gctggaagtc caacccagat      1020
     atccaggact ttatgaggaa gaaaggcttc ggtgaggact tcaagcagct ggagtccttc      1080
     tacatccaga cgctgttgga catcgtctct tcttatggca agggctatgt ggtgtggcag      1140
     gaggtgtttg ataataaagt aaagattcgg ccagacacaa tcatacaggt atggcgagag      1200
     gatattccag tgaactatat gaaggagctg gaactggtca ccaaggccgg cttccgggcc      1260
     cttctctccg ccccctggta cctgaaccgt atatcctatg gccctgactg gaaggatttc      1320
     tacgtagtgg aacccctggc atttgaaggt acccctgagc agaaggctct ggtgattggt      1380
     ggagaggctt gtatgtgggg agaatatgtg gacaacacaa acctggtccc caggctctgg      1440
     taagagtttt cggcggggag gtggagggtt gggcctgaga gcaggggttc tcccttacag      1500
     acccaatccc atctagccac ctctggacta gtacccttct ttcaggcctg agagagagca      1560
     ggccgtgcaa cgagccttct gaagatttgt gtgcaatatt cactctccac atgacttcca      1620
     tctatatccc tccagccgcc ctttgatatg tgggataggg attgttaacc tcacttctca      1680
     gagagataat gaggcctgaa gaacataggt gagttgctga agatccagca caagcatcca      1740
     tgattcctgt aataaggctt ccctctgctg ttttcactgc agccttacca agtatggttg      1800
     gatgtgcaga gtttacattt taaggacctc tgctgctgcc aatgtcattg tggttaatga      1860
     tgcctttaag gtttattctt attcctgtat ctttgagaga ggaagagagt gggattgcta      1920
     cccacatttt aatgaaggtg gagctgagcc ctagaactct ctgggagcca tccaacctgg      1980
     ctgtggctta taacaaggta ttgatcactt cctttggcct gagcgagtcc agggtgccta      2040
     gacaagaggt agccgcctgt ggatgtccag cacctttgca gggaatacag ggcccaatct      2100
     ggcacatgcc ccctttcctc caggcccaga gcaggggctg ttgccgaaag gctgtggagc      2160
     aacaagttga catctgacct gacatttgcc tatgaacgtt tgtcacactt ccgctgtgag      2220
     ttgctgaggc gaggtgtcca ggcccaaccc ctcaatgtag gcttctgtga gcaggagttt      2280
     gaacagacct gagccccggg caccgaggag ggtgctggct gtaggtgaat ggtagtggag      2340
     ccaggcttcc actgcatccc ggccagggga cggagcccct tgcctgcgtg ccccttgcct      2400
     gcgtgcccct gtgcttggag agaaaggggc cggtgctggc gctcacattc aataaagagt      2460
     aatgtggcat ttttccataa taaacatgga ttacctgtgt ttaaaaaaaa aaaaaaagtg      2520
     tgaatggcct tagggtaagg gcacagccag gctggagtca gtatctgccc ctgaggtctt      2580
     ttaagttgag ggctgggaat gaaacctgta gcctttgtgc tgttctgctt agcctgtgag      2640
     ctatgtcact cccctcccac tcctgaccat attccagaca cctgccctaa tcctcagcct      2700
     gctcacttca cttctgcatt acatctccaa ggcattggta tatggaaaaa aatgtagggg      2760
     cttggaggca ttctggacag tggggagggc tccagaccca acctggtcac agactagcct      2820
     ctcccccatg catactcatc cacctccctc ccctagagct attctccttt gggtttcttg      2880
     ctgcttcaat tttatacaac cattatttaa atattattaa acacatattg ttctctgaaa      2940
     aaaaaaaaaa aaaaaa                                                      2956
//