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EBI DbfetchID CR848434; SV 2; linear; mRNA; STD; VRT; 2901 BP. XX AC CR848434; XX DT 12-OCT-2004 (Rel. 81, Created) DT 21-OCT-2008 (Rel. 97, Last updated, Version 6) XX DE Xenopus tropicalis finished cDNA, clone TEgg048n02 XX KW . XX OS Xenopus (Silurana) tropicalis (western clawed frog) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; OC Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus; OC Silurana. XX RN [1] RP 1-2901 RA Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K., RA Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V., RA McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J., RA Zorn A.M.; RT ; RL Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases. RL Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries: RL trop@sanger.ac.uk XX CC Sanger Xenopus tropicalis EST/cDNA project. CC CC This sequence is from a Xenopus Gene Collection (XGC) library, from a CC library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted CC from eggs. EcoRI-NotI cut cDNA was then ligated into pCS107 with EcoRI at CC the 5' end and NotI at the 3' end. CC Vector: pCS107; Site_1: EcoRI; Site_2: NotI CC Host: Escherichia coli XL1-blue XX FH Key Location/Qualifiers FH FT source 1..2901 FT /organism="Xenopus (Silurana) tropicalis" FT /mol_type="mRNA" FT /dev_stage="egg" FT /clone_lib="XGC-egg" FT /clone="TEgg048n02" FT /db_xref="taxon:8364" FT mRNA 1..2876 FT /gene="nsun2" FT /locus_tag="TEgg048n02.1-001" FT /product="novel NOL1/NOP2/Sun domain family protein" FT CDS 128..2524 FT /gene="nsun2" FT /locus_tag="TEgg048n02.1-001" FT /standard_name="OTTXETP00000000867" FT /product="novel NOL1/NOP2/Sun domain family protein" FT /note="match: proteins: Q6NTY4 Q8CDF9 Q9NXD9" FT /db_xref="GOA:Q28E61" FT /db_xref="InterPro:IPR001678" FT /db_xref="UniProtKB/Swiss-Prot:Q28E61" FT /protein_id="CAJ83692.1" FT /translation="MGRRNRRNRQRHQRSTEQRSPAEEEQRRKAREQAAWECGYPEIIK FT ENKLFEHYYQELKIVPDGEWDKFMASLREPLPATIRITGYKSHAKEILHCLKEKYFKEL FT QDIEVDGQKIEAPQPLSWYPEELAWHTNLSRKIIRKSPELEKFHQFLVNETESGNISRQ FT EAVSMIPPVLLKVQPHHKILDMCAAPGSKTAQIIEMLHADMNVPFPEGFVIANDVDNKR FT CYLLVHQAKRLNSPCIMVVNHDASSIPRLLVENNGSREVLYYDRILCDVPCSGDGTLRK FT NIDVWKKWTTLNSLQLHGLQIRIATRGVEQLAEGGRMVYSTCSLNPVEDEAVIASLLDK FT SEGSLELADVASEIPGLKWMPGITQWKVMTKEGHWYEKWEDIPTSRHTQIRPTMFPPKD FT EEKLKSMNLNRCMRILPHHQNTGGFFVAVLIKKAPMPWNKRQPKLQRRPPVSACDASIA FT VAPELVKAVTENSAGMADEPAVDTENGETKPCTNQSDSSKTDIVCCPPPSKKMKLFGFK FT EDPFVFVSEDDPIFDPIQTFYALDPSFPKKNLLTRTQEGKKRQLYMVSKELRNVLLHNS FT EKMKVINTGIKVLCRNNDGEQYGCAYRLAQEGIYTLYPFINARIVTVSIEDIKVLLTQE FT NPFLSKFSKETQKQANNFDMGSIVLKYEPDPQEPETLQCPIVLCGWRGKTSIRSFVPKN FT ERLHYLRMMGVEVFKEKAEVLEKKPVEGKACDEEHIDEKMDIDGAKEESKELSGNESGD FT DEDPKEEDVIDRGVLEHVALKNTSAIPASVEDQAEDASVSKESVD" XX SQ Sequence 2901 BP; 950 A; 540 C; 653 G; 758 T; 0 other; tggacgtcat cgccacggtc aaatgcgctt acttaacacg tgtttgatca cagaatcagt 60 cttgtagtct tggaatcaac caactatttt ccattcctgt cgtaatctcc ttgtgcgttg 120 gggcattatg ggccgcagaa atcggcgaaa ccgccagagg caccaaagga gcactgagca 180 gcgaagtccc gcagaggaag agcagcggcg caaagctaga gagcaggcgg cttgggaatg 240 tggttaccct gaaatcatca aagaaaacaa attatttgaa cattattatc aggaactaaa 300 gattgtacct gatggggagt gggacaagtt catggcttct ctccgggaac cccttccggc 360 taccataaga atcacaggat acaaaagcca tgctaaagaa atactgcatt gtctgaagga 420 gaaatacttc aaagaactgc aagatattga ggttgatggg cagaagatag aagctccaca 480 gccattaagc tggtaccctg aagagcttgc ctggcatacc aatctgagca ggaaaataat 540 tagaaagtct ccagaactgg aaaagtttca tcagtttctt gtcaacgaaa cagaatcggg 600 caacattagt cggcaagagg ctgttagtat gattccacca gtccttctga aagttcagcc 660 gcatcacaag attctggata tgtgtgctgc tcctggatca aaaacagccc agataattga 720 aatgttacat gccgatatga atgtaccctt tcctgagggt tttgtcattg caaatgatgt 780 tgacaataaa cgctgttact tactggttca tcaagccaag agactaaaca gtccttgcat 840 tatggtagta aaccatgatg cttccagcat tcccagacta ctagtagaga acaatggttc 900 tagagaggtg ttgtactacg acagaatact ctgtgatgta ccatgcagcg gtgatgggac 960 tttgaggaaa aacattgacg tgtggaagaa gtggacaact ttgaacagct tgcagttaca 1020 tgggctacag attaggattg ctacccgtgg ggtagaacag ttagcagaag ggggccgaat 1080 ggtctattct acgtgctctt tgaatcctgt tgaagatgag gctgttatag cttctctgtt 1140 ggacaaaagt gaaggttccc tggagcttgc tgacgtggct tcagaaattc ctggcttaaa 1200 atggatgcct gggattaccc agtggaaggt aatgacaaaa gaaggacact ggtatgagaa 1260 atgggaagat attcccacaa gcagacatac tcagattcgc ccaacaatgt ttccgccaaa 1320 agatgaggag aaattgaaat caatgaatct aaaccgttgc atgcgaatac taccgcatca 1380 tcaaaacaca ggaggattct ttgtagctgt gttgataaag aaagcaccaa tgccatggaa 1440 caaacgacag ccaaagctgc aaaggagacc tcctgtttca gcttgtgatg catctattgc 1500 tgttgccccc gagcttgtga aagctgtcac tgagaatagt gcaggaatgg cagatgaacc 1560 tgctgtagac acagaaaatg gtgaaactaa accttgtaca aaccagagtg attctagtaa 1620 aactgatatt gtttgctgcc cacctccttc caaaaaaatg aagttgtttg gttttaaaga 1680 agatcctttt gtctttgttt ctgaagatga tccaattttt gacccaatcc agacgttcta 1740 tgcacttgat ccttccttcc ctaaaaagaa cttactgaca cgaacacagg agggaaaaaa 1800 aaggcagttg tatatggtct ctaaggagct gcgaaatgta cttctccata atagtgagaa 1860 gatgaaggta attaacactg gtataaaggt gttatgccgc aacaatgatg gagaacagta 1920 tggttgtgct tacagattag cacaagaggg catatataca ctttatccgt tcatcaatgc 1980 gagaattgta actgtatcta tcgaagatat caaagttcta ctcacccaag aaaatccttt 2040 ccttagtaaa tttagtaaag aaacacagaa acaagccaat aattttgata tgggaagcat 2100 tgtccttaaa tatgaacctg atccacaaga accggagact ctgcagtgcc ccattgttct 2160 ttgtggctgg cgtgggaaaa catcgatccg ttcttttgta ccgaaaaacg aaagattaca 2220 ttatctaaga atgatgggag tagaagtgtt taaggagaaa gctgaagtcc ttgaaaaaaa 2280 gcctgtagaa ggaaaggcat gcgatgagga gcatatagat gagaaaatgg acattgacgg 2340 tgcaaaggag gagagtaaag aattgtcggg aaatgagagt ggtgatgatg aggaccctaa 2400 ggaagaagac gttattgaca gaggagtctt ggaacatgta gcacttaaaa acacctcagc 2460 aatcccagca tctgtcgaag atcaagctga ggatgccagc gtgagcaaag agtcagtaga 2520 ctaaaacgtt gccttctttt gtacataaac aaaatatagt atggtggatt tttatttatt 2580 tagatgaaag aggaagggaa atctttgttc ttttaaggtg aagcatggca tgagcccttt 2640 tgaagtacac cccagatctc ttacttaaca cacattaatc ctctcatcca ccatgtttat 2700 atattttttt ttaattatat gggctagttt gttggtctct tctcattagt ccatttacag 2760 gatgcaaaat tattgtaatt ctagacagtt acttacattt tcatttttca gaatcagccg 2820 aaaatatact ggatttcatt tttttaaaaa aaaataaaga tgcagtgctt aaaaataaaa 2880 aaaaaaaaaa aaaaaaaaaa a 2901 // |
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