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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CR761827; SV 2; linear; mRNA; STD; VRT; 1896 BP.
XX
AC   CR761827;
XX
DT   09-SEP-2004 (Rel. 81, Created)
DT   04-OCT-2006 (Rel. 89, Last updated, Version 6)
XX
DE   Xenopus tropicalis finished cDNA, clone TGas084j22
XX
KW   .
XX
OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1896
RA   Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K.,
RA   Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V.,
RA   McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J.,
RA   Zorn A.M.;
RT   ;
RL   Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries:
RL   trop@sanger.ac.uk
XX
CC   Sanger Xenopus tropicalis EST/cDNA project.
CC   
CC   This sequence is from a Xenopus Gene Collection (XGC) library, from a
CC   library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted
CC   from gastrula embryos. EcoRI-NotI cut cDNA was then ligated into pCS107
CC   with EcoRI at the 5' end and NotI at the 3' end.
CC   Vector: pCS107; Site_1: EcoRI; Site_2: NotI
CC   Host: Escherichia coli XL1-blue
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1896
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /mol_type="mRNA"
FT                   /dev_stage="gastrula (stage 10.5-13 mixed)"
FT                   /clone_lib="XGC-gastrula"
FT                   /clone="TGas084j22"
FT                   /db_xref="taxon:8364"
FT   mRNA            1..1878
FT                   /gene="adprhl2"
FT                   /locus_tag="TGas084j22.1-001"
FT                   /product="ADP-ribosylhydrolase like 2"
FT   CDS             7..1059
FT                   /gene="adprhl2"
FT                   /locus_tag="TGas084j22.1-001"
FT                   /standard_name="OTTXETP00000000407"
FT                   /product="ADP-ribosylhydrolase like 2"
FT                   /note="match: proteins: Q6IAB8 Q8CG72"
FT                   /db_xref="GOA:Q28FQ6"
FT                   /db_xref="InterPro:IPR005502"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q28FQ6"
FT                   /protein_id="CAJ81573.1"
FT                   /translation="MMAAGVSRFRGSLLGALLGDCIGAVFEGHTNVTKEFLFDYMKSLD
FT                   KGERLKRVLTYTDDTAMARSIVQSVLENYEFNIEDLANRFTTEYNRDPDRGYGMAVVHV
FT                   FEKLGSGEYKHVFSPAREQFDGKGSYGNGAAMRVVGISLAYPRIPDIIEYARTSGMLTH
FT                   ASSLGYNGAILQALAVHYALQGELAPETFLDQLLDHMKEVETDKKSRSDALELEMDEFP
FT                   YCNKLRKIKAFLAREDVTRKDIVKELGNGIQAFESVPTAIYSFLRCLKPVSELPSELTN
FT                   LQRTIAFCILLGGDTDTIATMAAAIAGAYHGEEQIPLNWKLSAEGYKDAEDWGEKLHQL
FT                   YCRRLQSTTS"
FT   polyA_signal    1859..1864
XX
SQ   Sequence 1896 BP; 583 A; 336 C; 423 G; 554 T; 0 other;
     ctaaagatga tggcggctgg agtatctcgc ttccgagggt cgcttcttgg ggccctgctc        60
     ggagactgca taggggctgt gtttgaaggg catactaacg tgaccaagga atttttgttc       120
     gattatatga agtcgctgga caagggggag aggctaaaaa gggttttaac atacacggat       180
     gacacagcca tggcaagatc gattgtgcag tcagtacttg aaaactatga atttaatatt       240
     gaagatcttg caaacaggtt taccacagag tataatcgtg accctgaccg tggatatgga       300
     atggctgtag ttcatgtgtt tgagaagctt ggcagtggag aatataaaca tgtgttttca       360
     ccagctaggg aacagtttga cggtaaaggt tcatatggaa atggagccgc catgagagtt       420
     gtaggaattt cattggccta tcccaggatt ccagatataa tagagtatgc cagaactagt       480
     ggaatgctga cacatgcttc atctctgggc tataatgggg ccattcttca ggctctagca       540
     gtgcactatg ctttgcaggg ggagcttgca ccagagacat tcttggatca gcttttggat       600
     cacatgaagg aagttgaaac agataagaaa tcccgttcag atgcccttga attagaaatg       660
     gatgaattcc cttactgtaa caaattaagg aagattaaag cgtttttagc tcgagaagat       720
     gtcacacgga aggatatagt taaagaatta ggtaatggca ttcaagcttt cgagtctgtt       780
     ccaactgcaa tttactcatt tctgcgatgc ttaaagccag tgtcagagct gccttctgaa       840
     cttaccaact tgcagcgcac aattgccttc tgcatcttgc ttgggggaga cacagacacc       900
     attgctacca tggctgcagc aattgctggt gcttaccatg gagaggagca gatcccactg       960
     aactggaagc tctcggctga gggttacaaa gatgccgagg attggggcga gaagttgcat      1020
     cagttgtact gcaggcgatt acaaagtacc acttcctaac ctgtggtaga tagctatgtc      1080
     tagaaagcat tagtactgct gaagagtgta catacctttt gtatttggtt gaagataagt      1140
     cacttcagag ggaagatggc ctgtggctct tatccatgca atgcttatgt tctgaactgc      1200
     cctaaaaact gtggcttaag tcccattgaa aagaaatctc cttaaaaata aagctaaaaa      1260
     tagctgacta tcattttttg cagcttttaa attgtatttt ctttctgctg atcagagtga      1320
     ttaaaaattg ttgcacaaag cagtgaaatc tgcaatatat gtaacatttt tttttttagc      1380
     agtgcaaagc agacaacagt ggatttcagt ccattctgaa tatcatgcca acacttgttt      1440
     gctttaagat tttaggaaat gtgcctttcc agaaaaaaaa tattaaaaat atcatgtcac      1500
     ctatcaagag cttaatcctt ggccagcttt aaaactcttc tatcaataaa ttagcagaga      1560
     ctggtggaaa ctgtattaca ctcgcttaaa gatggcatat ggcacctgaa tcttccatct      1620
     tgcctgtata gtcatgtttt ataaatgtat agacattaat ataaattgct gtagtgcttt      1680
     cagccttaat gtcttactaa gtttaaatga agcagatgca gaaacctggt agtgccactg      1740
     tgtggtgctc ttagcacaat gtttcctaaa tattgagaat gcttttgtgt gaaaatacca      1800
     gtaaaattca ataatttttc ttttatacaa aattggactt agggaagcag agttctaaaa      1860
     taaaatatat aaagagtgaa aaaaaaaaaa aaaaaa                                1896
//
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