EBI Dbfetch

ID   CR761124; SV 2; linear; mRNA; STD; VRT; 1727 BP.
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AC   CR761124;
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DT   09-SEP-2004 (Rel. 81, Created)
DT   04-OCT-2006 (Rel. 89, Last updated, Version 6)
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DE   Xenopus tropicalis finished cDNA, clone TEgg035c15
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KW   .
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OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
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RN   [1]
RP   1-1727
RA   Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K.,
RA   Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V.,
RA   McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J.,
RA   Zorn A.M.;
RT   ;
RL   Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries:
RL   trop@sanger.ac.uk
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CC   Sanger Xenopus tropicalis EST/cDNA project.
CC   
CC   This sequence is from a Xenopus Gene Collection (XGC) library, from a
CC   library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted
CC   from eggs. EcoRI-NotI cut cDNA was then ligated into pCS107 with EcoRI at
CC   the 5' end and NotI at the 3' end.
CC   Vector: pCS107; Site_1: EcoRI; Site_2: NotI
CC   Host: Escherichia coli XL1-blue
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FH   Key             Location/Qualifiers
FH
FT   source          1..1727
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /mol_type="mRNA"
FT                   /dev_stage="egg"
FT                   /clone_lib="XGC-egg"
FT                   /clone="TEgg035c15"
FT                   /db_xref="taxon:8364"
FT   mRNA            1..1709
FT                   /gene="ALG6"
FT                   /locus_tag="TEgg035c15.1-001"
FT                   /product="asparagine-linked glycosylation 6 homolog (yeast,
FT                   alpha-1,3-glucosyltransferase)"
FT   CDS             45..1565
FT                   /gene="ALG6"
FT                   /locus_tag="TEgg035c15.1-001"
FT                   /standard_name="OTTXETP00000003861"
FT                   /product="asparagine-linked glycosylation 6 homolog (yeast,
FT                   alpha-1,3-glucosyltransferase)"
FT                   /note="match: proteins: O43053 Q802T2 Q9Y672"
FT                   /db_xref="GOA:Q5I096"
FT                   /db_xref="InterPro:IPR004856"
FT                   /db_xref="UniProtKB/TrEMBL:Q5I096"
FT                   /protein_id="CAJ81915.1"
FT                   /translation="METCSLAALAVLLALYVRWTVSLGPYSGAHKPPMFGDYEAQRHWQ
FT                   EITFSLPVKQWYFNSTDNNLQYWGLDYPPLTAYHSFLCGQIAHLLNPDWVALNASRGYE
FT                   SLQHKLFMRATVLVADLIIYIPAVIVYCFCMREIPSKKKISSLCCILLYPGLILIDYGH
FT                   FQYNSVSLGFALWGVIALSFEWHLLGSFVFCFALNYKQMELYHSLPFFCYLLGRCLKGG
FT                   ITGRGLFLLFKIGVTVIASFALCWIPFLTETEQILQVLRRLFPVGRGLFEDKVANIWCS
FT                   LSAIFKVKKMLSSESQLYLSFLCTLLSVLPSCIKLTMQPSVRRFKFALVNCALSFFLYS
FT                   FQVHEKSILLVSLPVSLIINDAPLISTWFLLVSTFSMLPLLLKDGLLMAYIITTLVFLL
FT                   VSKSLLPAPENMSEESINLKPFCISVRRYLPWFRLPGYLIKLSFCTSLMGMAALTLASA
FT                   VLVPPPRLPDLFPVLVSSFSCVHFLAFLFYFNIIYFWDNFNDKSKKKL"
XX
SQ   Sequence 1727 BP; 451 A; 334 C; 324 G; 618 T; 0 other;
     atgagttaag aggaagtagt gtgctgagag agtgttttag agccatggag acttgttcgc        60
     tagcagcttt agctgtgctt ttggcgcttt atgtgcgctg gacagtgtca ctcggtcctt       120
     actcaggagc ccataagcca ccaatgtttg gagattatga agcccagagg cactggcagg       180
     aaataacatt cagtttacca gttaaacagt ggtattttaa ttctacagac aacaatcttc       240
     agtactgggg ccttgattac ccacctctga ctgcatacca cagttttctt tgtgggcaaa       300
     ttgctcatct actaaatcca gactgggtgg ccctgaacgc atcccgaggt tacgaatctc       360
     tccaacacaa gctgtttatg cgggctactg ttttagtagc tgacttgatc atttacatcc       420
     ctgctgtaat tgtctactgt ttttgtatga gagaaatacc ttcaaaaaaa aaaatttcct       480
     ccttatgctg tattttgctt tacccgggct tgatccttat agactacgga cattttcaat       540
     acaactctgt gagccttgga tttgcactat ggggagtcat tgcgctttca tttgaatggc       600
     acctgctggg atcatttgta ttttgctttg cactaaacta caaacaaatg gaactttacc       660
     attctctgcc atttttctgc tatctgttag gaagatgttt aaaaggaggc attacaggca       720
     ggggcttatt cttgttattt aagattggcg ttaccgtaat tgcttccttt gctctttgct       780
     ggattccttt cttgacagaa actgaacaaa tacttcaagt ccttagaaga cttttccctg       840
     ttggccgtgg actctttgag gacaaagtag ccaacatttg gtgcagttta agtgcaatat       900
     ttaaagtaaa gaaaatgtta tcttcggaat ctcagttata tttaagcttt ctttgtacac       960
     tgttaagtgt attgccttca tgcattaaac tgacaatgca gccttctgtt cgtagattta      1020
     aatttgctct ggttaactgt gcactttcat tcttcttata ttcctttcaa gttcatgaaa      1080
     aatcaatact tttagtgtca ttgccagtca gcttaattat aaatgatgct ccgttgatct      1140
     ctacatggtt tttattggta tcaacattta gcatgcttcc ccttttgctg aaggatggat      1200
     tgttaatggc ttatatcatc actacgttag tgttccttct agtaagcaag tctttgctgc      1260
     cagcgcctga aaatatgtca gaagagtcta taaatctgaa accattctgc atttctgtaa      1320
     ggagatatct tccttggttc aggcttccag gatatctgat taaactatca ttctgcacat      1380
     cactgatggg gatggctgct ctgaccctgg caagtgctgt cctggttcca ccaccaaggc      1440
     ttcctgacct ttttcctgta cttgtctcca gcttctcctg tgttcatttt ttagcatttt      1500
     tattttattt taacattatt tatttttggg ataatttcaa tgacaaaagt aagaaaaaac      1560
     tgtgagtcca aaatgtgttt tatattccat ttttagtttt atgtatatat tgctagcatt      1620
     tggacacaga ttatttttct tttttaatta ctgaaacatg cttgtttaat tttggccttt      1680
     tgagtcaggt caataaagta tttttactca aaaaaaaaaa aaaaaaa                    1727
//