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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   CR760700; SV 2; linear; mRNA; STD; VRT; 1104 BP.
XX
AC   CR760700;
XX
DT   09-SEP-2004 (Rel. 81, Created)
DT   04-OCT-2006 (Rel. 89, Last updated, Version 6)
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DE   Xenopus tropicalis finished cDNA, clone TEgg035l07
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KW   .
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OS   Xenopus (Silurana) tropicalis (western clawed frog)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Anura; Mesobatrachia; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC   Silurana.
XX
RN   [1]
RP   1-1104
RA   Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K.,
RA   Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V.,
RA   McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J.,
RA   Zorn A.M.;
RT   ;
RL   Submitted (04-OCT-2006) to the EMBL/GenBank/DDBJ databases.
RL   Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK. E-mail enquiries:
RL   trop@sanger.ac.uk
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CC   Sanger Xenopus tropicalis EST/cDNA project.
CC   
CC   This sequence is from a Xenopus Gene Collection (XGC) library, from a
CC   library constructed by Aaron M. Zorn. cDNA was prepared from RNA extracted
CC   from eggs. EcoRI-NotI cut cDNA was then ligated into pCS107 with EcoRI at
CC   the 5' end and NotI at the 3' end.
CC   Vector: pCS107; Site_1: EcoRI; Site_2: NotI
CC   Host: Escherichia coli XL1-blue
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FH   Key             Location/Qualifiers
FH
FT   source          1..1104
FT                   /organism="Xenopus (Silurana) tropicalis"
FT                   /mol_type="mRNA"
FT                   /dev_stage="egg"
FT                   /clone_lib="XGC-egg"
FT                   /clone="TEgg035l07"
FT                   /db_xref="taxon:8364"
FT   mRNA            1..1083
FT                   /gene="dullard"
FT                   /locus_tag="TEgg035l07.1-001"
FT                   /product="dullard homolog (Xenopus laevis)"
FT   CDS             91..825
FT                   /gene="dullard"
FT                   /locus_tag="TEgg035l07.1-001"
FT                   /standard_name="OTTXETP00000002623"
FT                   /product="dullard homolog (Xenopus laevis)"
FT                   /note="match: proteins: Q8JIL9 Q96GQ9"
FT                   /db_xref="GOA:Q28HW9"
FT                   /db_xref="InterPro:IPR004274"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q28HW9"
FT                   /protein_id="CAJ82232.1"
FT                   /translation="MMRTPGLLGLRGFVAFAAKLWSFVLYLLRRQVRTIIQYQTVRYDV
FT                   LPLSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVIDKHPV
FT                   RFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVLRRRFYRQHCTL
FT                   ELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSDTALLNLLPMLD
FT                   ALRFTADVRSVLSRNLHQHRLW"
FT   polyA_signal    1063..1068
FT   polyA_site      1083
XX
SQ   Sequence 1104 BP; 233 A; 325 C; 289 G; 257 T; 0 other;
     ctccttagcc gccacttcct cccagcgtgt aacggagcct gctcctctct cccccgctgc        60
     cctgcccggc cctagcaccg gattcccggg atgatgcgga ctccagggct ccttggcctc       120
     aggggcttcg tggcctttgc agccaaactg tggagcttcg tcctctacct gctccgccgg       180
     caggtccgca ccatcataca gtaccagacg gtgagatacg acgttctgcc gctctctccg       240
     gcttcccgca accgcctcag tcaggtgaaa cggaaagttc tagttctaga tttagatgag       300
     accctgatcc attctcatca cgatggggtt ctgcgcccga cggtccgacc cgggaccccc       360
     ccagatttta tacttaaggt tgttatagat aaacatccgg tgcgattctt tgtacataaa       420
     cggccgcacg tggatttctt cctggaggtg gtgagccagt ggtacgagct ggtggtattt       480
     acagccagca tggagatcta cggctccgct gtggccgaca agttagataa caacaggggc       540
     gtgctgcgga ggcgtttcta cagacagcac tgtacgttgg agctgggcag ttacattaag       600
     gacctgtcag tggtgcacag cgacctgtct agtgtggtca ttctggataa ctcccccgga       660
     gcctacagga gccacccaga taacgcgatt cccataaagt cgtggttcag tgaccccagc       720
     gacacggccc tattgaatct gctgccaatg ttggacgctc tcaggttcac agccgacgtc       780
     cggtccgttc taagccgcaa tctccaccag caccgactgt ggtgacagtg acccccgctc       840
     acccctctcc tgaatatccc ctgccccccc cccggtgcat ttacagacag agactgtacc       900
     cctcagcgag gaaggaggat acggagcgcc ctctttctac ctctcggaca ctttacgggg       960
     agggtgacat ggactctaag atgccccttc tgcccctttt tttcaggggt tgggggtgcg      1020
     tggggggaag gaggggctgg tttttaattg tagactttct tgtataaaga gaattatttc      1080
     aagttaaaaa aaaaaaaaaa aaaa                                             1104
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