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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   BX818780; SV 1; linear; mRNA; HTC; PLN; 1727 BP.
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AC   BX818780;
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DT   06-FEB-2004 (Rel. 78, Created)
DT   06-FEB-2004 (Rel. 78, Last updated, Version 1)
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DE   Arabidopsis thaliana Full-length cDNA Complete sequence from clone
DE   GSLTFB13ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana
DE   (thale cress).
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KW   GSLT_cDNA; HTC.
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OS   Arabidopsis thaliana (thale cress)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OG   Plasmid pCMVSPORT_6
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RN   [1]
RP   1-1727
RA   Genoscope;
RT   ;
RL   Submitted (18-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL   Genoscope - Centre National de Sequencage : BP 191 91006 EVRY cedex -
RL   FRANCE (E-mail : seqref@genoscope.cns.fr - Web : www.genoscope.cns.fr).
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RN   [2]
RP   1-1727
RA   Castelli V., Aury J.M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA   Cruaud C., Quetier F., Scarpelli C., Schachter V., Temple G., Caboche M.,
RA   Weissenbach J., Salanoubat M.;
RT   "Whole Genome Sequence Comparisons and "Full-Length" cDNA Sequences: A
RT   Combined Approach to Evaluate and Improve Arabidopsis Genome Annotation";
RL   Unpublished.
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DR   GOA; O48840.
DR   HSSP; 4KBP; P80366.
DR   InterPro; IPR004843; M-pesterase.
DR   InterPro; IPR008963; Purple_acid_Pase-like_N.
DR   InterPro; IPR015914; Purple_acid_Pase_N.
DR   UniProtKB/Swiss-Prot; O48840; PPA13_ARATH.
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CC   The sequences are based on single pass reads.
CC   Life Technologies (a division of Invitrogen) members carried out
CC   full-length librairies construction : Temple G.
CC   Genoscope members carried out sequencing and annotation : Castelli V., Aury
CC   J.M., Jaillon O., Wincker P., Menard M., Cruaud C., Schachter V.,
CC   Weissenbach J., Salanoubat M.
CC   URGV INRA : Clepet C., Caboche M.
CC   Annotation is based on the June 2003 version of the Arabidopsis genome
CC   released by MIPS (Munich Information center for Protein Sequences).
CC   5 prime and 3 prime are assembled with Phrap.
CC   http://www.genoscope.cns.fr/externe/sequences/Banque_Projet_EF/Full_length
CC   http://www.genoscope.cns.fr/cgi-bin/ggb/ggb?source=Arabidopsis.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1727
FT                   /organism="Arabidopsis thaliana"
FT                   /plasmid="pCMVSPORT_6"
FT                   /strain="col-0"
FT                   /mol_type="mRNA"
FT                   /clone="GSLTFB13ZA08"
FT                   /tissue_type="Flowers and buds"
FT                   /db_xref="taxon:3702"
FT   gene            1..1727
FT                   /gene="At2g32770"
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SQ   Sequence 1727 BP; 484 A; 389 C; 359 G; 495 T; 0 other;
     catttatgtg aaaatggtgg taaaatatac aatgtcgatg tcctttttcg tcattttcgc        60
     ttctactgtt actatcatcg ttcatggttt cccatcgaca ctcgacggtc cgcttaaccc       120
     cgttactgct ccactcgacc cgaatcttaa cccgattgca ttcgacttac cagaatccga       180
     cccgagtttc gtaaaaccca tttcggagtt tcttcttccc gaacagatct ctgtctctct       240
     ctcttacagc tttgactccg tctggatttc ttgggtcaca ggggaatacc aaattggtga       300
     aaaagattct gcacctctgg atcctaattg tgtgcaaagc atagttcaat accgtgaatt       360
     cgatgttcgt cgtactagga agcaaaatgc aacaggccat tctattgttt ataaccaaca       420
     gtattcttct gagaatggtt tcatgaacta tacttcaggc atcattcacc atgttcaact       480
     cacaggtctt aaaccaaaca cattgtaccg ataccaatgc ggagacccgt ctttatcagc       540
     aatgagcaaa gagtattact tcaggacaat gcctaagtct acatcagaga attatccaca       600
     cagaatcgtt gtggctggag atttgggtct tacttacaac acatcaactg ttttggggca       660
     tattctgtct aaccatccag atcttgtggt tttacttgga ggattcagct acgctgatac       720
     ttatcttgcg aataagacta aactagattg tagttcttgt cattgtgacc aaaatggaac       780
     tagttctgat tgtggttctt gttattctag tggagaaact tatcagcctc gctgggatta       840
     ttggggaagg ttcatggagc cactcacggc taatgttcca accatgatgg tagcagggga       900
     gcacgagatt gagccgcaga ccgagaataa tctgacattc gctgcataca gttcaagatt       960
     cgcattccct tcaaacgaaa gcggttcttt ctcaccatta tactattctt tcaacgcggg      1020
     aggagctcat ttcatagtgc tcaattcata cacactttat gataactcat ctgatcagta      1080
     tatttggctt gaaagtgacc tgatcaaaat aaacagatca gaaactccat gggtggttgc      1140
     aacttggagt cttccttggt acagaacatt cacccggcat taccgagacg ctgaatcaat      1200
     gaggattcac cttgaaaact tgctctataa ctaccgagtc gatatcgtct tcaatagtca      1260
     tgttgatgca tatgagagat caaacagagt ctcacaacta cacgttagac caatgtggcc      1320
     cggtttatat aacaaccggt gcaggaggag ctgggaagct ggagactcag catgtagacg      1380
     acccaggaaa tattccagat ccttctcaga actactcgtg cagatccagc ggcttgaact      1440
     ccacgttgga gcctgtaaaa gatgagactt gtccggttaa gcagccggag tatagcgcat      1500
     acagagaaag cagcttcggt ttcggtatac tagaagtgaa gaatgagacg catgcattgt      1560
     ggagctggaa ccggaatcaa gacctgtact atctcgccgc cgacgtaata catattgtac      1620
     gtcagcctga aatgtgctcg gtttgcaact aaaccaagta gttattccgg tagattttat      1680
     aacgttctac agtttacgta gccattatct ataagtctga acgtaaa                    1727
//
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