EBI Dbfetch

ID   BX640449; SV 1; linear; genomic DNA; STD; PRO; 348074 BP.
XX
AC   BX640449;
XX
DT   09-AUG-2003 (Rel. 76, Created)
DT   29-JUL-2008 (Rel. 96, Last updated, Version 6)
XX
DE   Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
XX
KW   complete genome.
XX
OS   Bordetella bronchiseptica
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
XX
RN   [2]
RP   1-348074
RA   Sebaihia M.;
RT   ;
RL   Submitted (06-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL   Submitted on behalf of the Pathogen Sequencing Unit, Sanger Institute,
RL   Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail:
RL   ms5@sanger.ac.uk
XX
RN   [3]
RA   Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N., Harris D.E.,
RA   Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L.,
RA   Cerdeno-Tarraga A.M., Temple L., James K., Harris B., Quail M.A.,
RA   Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I.,
RA   Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T.,
RA   Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S.,
RA   Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E.,
RA   Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M.,
RA   Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S.,
RA   Barrell B.G., Maskell D.J.;
RT   "Comparative analysis of the genome sequences of Bordetella pertussis,
RT   Bordetella parapertussis and Bordetella bronchiseptica";
RL   Nat. Genet. 35(1):0-0(2003).
XX
DR   EMBL-CON; BX470250.
DR   RFAM; RF01118; PK-G12rRNA.
DR   SILVA-LSU; BX640449.
DR   SILVA-SSU; BX640449.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..348074
FT                   /organism="Bordetella bronchiseptica"
FT                   /strain="RB50"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:518"
FT   CDS             332..3082
FT                   /transl_table=11
FT                   /locus_tag="BB3932"
FT                   /product="putative zinc protease"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2497"
FT                   /db_xref="GOA:Q7WGI6"
FT                   /db_xref="InterPro:IPR001431"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGI6"
FT                   /protein_id="CAE34295.1"
FT                   /translation="MRLPLLSRRLNALLVSSFLAFQAGAASLPAGVSEVSSIEGITEYR
FT                   LANGLRVLLAPDASKPTTTVNMTYLVGSRNENYGQTGMAHLLEHMLFKGTPAIRNALGE
FT                   FSRRGLQANGSTSSDRTNYFASFAANPETLKWYLGWQADAMVNSLIAREDLDSEMTVVR
FT                   NEMESGENNPFRVLMQKMQAAAYQWHNYGKSTIGARSDVENVDIAQLRAFYHEYYQPDN
FT                   AVLIVAGKFDPQTALADIQSSLGKLPKPKRTLPPEYTVEPVQDGERSVTLRRAGGTPLV
FT                   AAMYHLPAAGSPDFVGLDLAATILADTPSGRLYHALVPTKLASGVFGFTMDQLDPGLAM
FT                   FGAQLQPGMDQDKALQTLTATLESLSSKPFSQEELERARSKWLTAWQQTYADPEKVGVA
FT                   LSEAIASGDWRLFFLQRDRVREAKLDDVQRAAVAYLVRSNRTEGRYIPTEKPQRAPLAQ
FT                   RADLAAVFKDYKGDPNFKAVEAFDPSPANIDKRTLRRTLDLPNGQVELALLPKATRGDR
FT                   VQAELLIQFGDAEALRGQRVALAAAAALLDRGTDKLSRQAIQDRLDQLQAEAAINGSGT
FT                   NLVVNISTLGKNLPDVMALVLDVVRNASFPQDQVEEYKRQAITMVQDAMTDPTALASRA
FT                   LARHNNPWPADDVRYVPTFDEALEQLRSLSRDDLATVSGKLYGAGRIKFSAVGEFDPAA
FT                   VEAVLRKGLDGWRSAPAYTRLPDPYRAVPAQQFDIATPDKANAFYISRMPLQLQDTNAD
FT                   YPALYLANFLLGTSETSRLWHRVRETEGLSYNVRSNLSVSSYEPSANWTIYAIYAPQNR
FT                   ARLEKAISEELARALKDGFTDQEVRDGVVALLNYRNLARAQDDVLADTWVNYMQTGRSF
FT                   QWSADMDRKLEALTPDQVNAALRKYLKPEAFSTAVAGDFTKKSAP"
FT   misc_feature    332..406
FT                   /note="Signal peptide predicted for BB3932 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.964 between residues 25 and 26"
FT   misc_feature    479..928
FT                   /note="HMMPfam hit to PF00675, DE Insulinase (Peptidase
FT                   family M16), score 7.2e-16"
FT   misc_feature    545..616
FT                   /note="PS00143 Insulinase family, zinc-binding region
FT                   signature."
FT   CDS             complement(3251..4372)
FT                   /transl_table=11
FT                   /gene="dnaJ"
FT                   /locus_tag="BB3933"
FT                   /product="molecular chaperone"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2498"
FT                   /db_xref="GOA:Q7WGI5"
FT                   /db_xref="HSSP:1BQZ"
FT                   /db_xref="InterPro:IPR001305"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGI5"
FT                   /protein_id="CAE34296.1"
FT                   /translation="MAKRDYYEVLGVAKNASDEDLKKAYRKLAMKYHPDRNPDSKEAEE
FT                   KFKEAKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGGMGGGFADAFGDIFGEIFGAG
FT                   RRGGGGPQVYRGADLKYALEITLEQAASGFDTEIRVPSWENCDTCHGSGAKAGTSPKTC
FT                   RTCGGSGAVRMQQGFFSVQQTCPTCHGTGKEITDPCPSCDGVGRTRRNKTLQVKIPAGI
FT                   DDGMRIRSSGNGEPGINGGPPGDLYVEIHIKQHKIFQRDGDDLHCELTIPFTTAALGGE
FT                   LQVPTLGGKAEISIPEGTQSGKTFRLRAKGIRGVRGSYPGDLYCHVVVETPVRLSDEQK
FT                   AILRQFEASLNDGGDRHSPQSKSWTDRVKEFFS"
FT   misc_feature    complement(3332..3697)
FT                   /note="HMMPfam hit to PF01556, DE DnaJ C terminal region,
FT                   score 2.1e-71"
FT   misc_feature    complement(3734..3976)
FT                   /note="HMMPfam hit to PF00684, DE DnaJ central domain (4
FT                   repeats), score 1.2e-42"
FT   misc_feature    complement(3863..3937)
FT                   /note="PS00637 CXXCXGXG dnaJ domain signature."
FT   misc_feature    complement(3920..3937)
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT   misc_feature    complement(4163..4360)
FT                   /note="HMMPfam hit to PF00226, DE DnaJ domain, score
FT                   1.3e-39"
FT   misc_feature    complement(4175..4234)
FT                   /note="PS00636 Nt-dnaJ domain signature."
FT   CDS             complement(4473..6398)
FT                   /transl_table=11
FT                   /gene="dnaK"
FT                   /locus_tag="BB3934"
FT                   /product="molecular chaperone"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2499"
FT                   /db_xref="GOA:Q7WGI4"
FT                   /db_xref="InterPro:IPR013126"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGI4"
FT                   /protein_id="CAE34297.1"
FT                   /translation="MSKIIGIDLGTTNSCVAVLDGGQVKIIENAEGARTTPSIVAYMDD
FT                   GETLVGAPAKRQAVTNPKNTLYAVKRLIGRKFDEKAVQKDIDLMPYSIVKADNGDAWVE
FT                   VRGKKLAPPQVSAEVLRKMKKTAEDYLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGL
FT                   EVKRIINEPTAAALAFGLDKTEKGDRKIVVYDLGGGTFDVSIIEIADVDGEMQFEVLST
FT                   NGDTFLGGEDFDQRIIDYIISEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSSQQTE
FT                   INLPYITADASGPKHLNLKITRAKLEALVEELIERTIEPCRVAIKDAGVKVSDIDDVIL
FT                   VGGMTRMPKVQDKVKEFFGREPRKDVNPDEAVAAGAAIQGSVLSGERKDVLLLDVTPLS
FT                   LGIETLGGVMTKMIQKNTTIPTRYSQTFSTADDNQPAVTIKVFQGEREIAAGNKGLGEF
FT                   NLEGIPPAPRGLPQIEVTFDIDANGILHVSAKDKGTGKENKITIKANSGLSEDEIQRMV
FT                   KDAEANAEEDHRLAELAQARNQADALVHATRKSLTEYGEKLEAAEKESIEAAIKDLEDI
FT                   LKTGDKAEIDAKVEALSTASQKLGEKMYADMQAQQQAQQQQAADNAKPVDDNVVDADFK
FT                   EVKRDQ"
FT   misc_feature    complement(4584..6389)
FT                   /note="HMMPfam hit to PF00012, DE Hsp70 protein, score 0"
FT   misc_feature    complement(5343..5387)
FT                   /note="PS01036 Heat shock hsp70 proteins family signature
FT                   3."
FT   misc_feature    complement(5781..5822)
FT                   /note="PS00329 Heat shock hsp70 proteins family signature
FT                   2."
FT   misc_feature    complement(6357..6380)
FT                   /note="PS00297 Heat shock hsp70 proteins family signature
FT                   1."
FT   CDS             complement(6489..6869)
FT                   /transl_table=11
FT                   /locus_tag="BB3935"
FT                   /product="putative thioredoxin"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2500"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGI3"
FT                   /protein_id="CAE34298.1"
FT                   /translation="MAAAPFDPAEVFQVFGMRRVDSASFDEQVVRAPGDDLRCVFLWGQ
FT                   DCYNCGIFKQTALLQRQALLALELSWFEADVYADEALGRRFSLHGVPTFVLYRSGKRLG
FT                   RVTGWPGLPQFSAAMQRLRDGT"
FT   CDS             complement(6877..7431)
FT                   /transl_table=11
FT                   /locus_tag="BB3936"
FT                   /product="putative GrpE chaperone"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2501"
FT                   /db_xref="GOA:Q7WGI2"
FT                   /db_xref="InterPro:IPR009012"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGI2"
FT                   /protein_id="CAE34299.1"
FT                   /translation="MTAPQEPVDSTPESGENAATPGLEDDLSAELAALRAELEAAQATV
FT                   KAQQEQVLRAAAEAENVRRRAQEDVAKARKFGIESFAESLVPVKDSLEAALAQPDQAAQ
FT                   AWREGVEVTLKQLTAAFERNLLKEIAPAQGDKFDPHLHQAISSVPADQPANTVLQLLQK
FT                   GYVIADRTLRPALVVVSAGQG"
FT   misc_feature    complement(6889..7401)
FT                   /note="HMMPfam hit to PF01025, DE GrpE, score 2.1e-50"
FT   misc_feature    complement(6895..7023)
FT                   /note="PS01071 grpE protein signature."
FT   CDS             complement(7573..7815)
FT                   /transl_table=11
FT                   /locus_tag="BB3937"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2502"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGI1"
FT                   /protein_id="CAE34300.1"
FT                   /translation="MNPPRKPTIGTSGPPGHANLEEDQLERELDEALLETFPASDPIAI
FT                   TSEDERDEPDDKVDEALEDTFPASDPPAPAQPGKK"
FT   CDS             complement(7897..8985)
FT                   /transl_table=11
FT                   /gene="hemH"
FT                   /locus_tag="BB3938"
FT                   /product="ferrochelatase"
FT                   /EC_number="4.99.1.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2503"
FT                   /db_xref="GOA:Q7WGI0"
FT                   /db_xref="InterPro:IPR001015"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGI0"
FT                   /protein_id="CAE34301.1"
FT                   /translation="MFLRLFKYLWPERYLPETPAQDPFDENPPPCGPGRVGVLLVNLGT
FT                   PDEPTRGAIRRYLGEFLSDPRVIEIPRYLWMPILHGLVLAMRPKKLAPRYAGIWMEEGS
FT                   PLLVYSQRQAAGVRQGLAARGVHAEVELAMRYGKPSIPAAITALRERGCDHILAVPLYP
FT                   QYAASTTATVVDAVTRHAGRLRDQPALRFVKRFHNDPAYVEAQAGRIAEFWQAHGRPQK
FT                   LVMSFHGLPRYSIELGDPYYRDCLDTARLLRERLGLREDEVEVTFQSRFGSARWLEPYT
FT                   EPTLAELARQGVTEVDVVCPGFVADCLETLEEISQECRDAFVAAGGRQFRYIPALNDCP
FT                   PWIEGLTDLVERQLRGWPTGNP"
FT   misc_feature    complement(7924..8883)
FT                   /note="HMMPfam hit to PF00762, DE Ferrochelatase, score
FT                   1.9e-116"
FT   misc_feature    complement(8260..8319)
FT                   /note="PS00534 Ferrochelatase signature."
FT   CDS             complement(9043..10047)
FT                   /transl_table=11
FT                   /locus_tag="BB3939"
FT                   /product="heat-inducible transcription repressor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2504"
FT                   /db_xref="GOA:Q7WGH9"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGH9"
FT                   /protein_id="CAE34302.1"
FT                   /translation="MDDRARALLKALIERYIADGQPVGSRTLSKVFDLSPATIRNVMAD
FT                   LEELGLIHSPHTSAGRVPTPRGYRMFVDSLLAVRAYQFEPAHIGELLPVSEPSRAVNAA
FT                   AALLSNLTQFAGVVLTPKRTQIFRQIEFIRLSDKRVLLIIVTPEGDVQNRILSAQRDYT
FT                   EAELLEAGNFFNVHFSGKSFDAVRRTLSTELAQLRDDISRLMQAAVEAGAEAADDGEAV
FT                   VISGERKLLDVTDIASDMDRLRKMFSLFEKKTDLLQLLDVSSRAQGVQIYIGGDSQLVP
FT                   MEEVSVITAPYGVDGKVIGTLGVIGPTRMAYERVIPIVDITARLLSNALSHNQ"
FT   misc_feature    complement(9100..9756)
FT                   /note="HMMPfam hit to PF01628, DE HrcA protein C terminal
FT                   domain, score 3.6e-50"
FT   CDS             10162..11061
FT                   /transl_table=11
FT                   /gene="ppnK"
FT                   /locus_tag="BB3940"
FT                   /product="probable inorganic polyphosphate/ATP-NAD kinase"
FT                   /EC_number="2.7.1.23"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2505"
FT                   /db_xref="GOA:Q7WGH8"
FT                   /db_xref="InterPro:IPR002504"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGH8"
FT                   /protein_id="CAE34303.1"
FT                   /translation="MYFPIVALIGRYQDTGLDAPLTALAQMLTQAGRRVLVEAETARNA
FT                   GVSGYPVADWDEIGRTATLAVVMGGDGTVLGAARHLAPYGVPLIGINHGRLGFITDIPL
FT                   QDAHDALGRVLEGNYQAEDRMLLQGGVWRGEQQMYSASAVNDVVLNRAGRGGMIEVRVE
FT                   LDGAFMYTQRADGLIIATPTGSTAYSLSANGPILHPGMNAMVLVPVAPQTLSNRPIVIP
FT                   DSGVLNMTLTAMGRVEIGASVHFDMQTWSDLQPGDRITVQRAPHTIRFVHPEGYSFFST
FT                   LRRKLHWNLMPQATDNLE"
FT   misc_feature    10252..11004
FT                   /note="HMMPfam hit to PF01513, DE ATP-NAD kinase, score
FT                   2.2e-77"
FT   CDS             11077..12738
FT                   /transl_table=11
FT                   /locus_tag="BB3941"
FT                   /product="DNA repair protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2506"
FT                   /db_xref="GOA:Q7WGH7"
FT                   /db_xref="InterPro:IPR003395"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGH7"
FT                   /protein_id="CAE34304.1"
FT                   /translation="MLRTLHIRDFVIVEQTELHFGDGFTVFSGETGAGKSILIDALALT
FT                   LGERGDASMLREGAARADITAVFDAPPALRDWLAERELDSGDELALRRVIDSQGRSRAY
FT                   INGMPATIAQLRELGDGLVDIHGQHAHQSLMRPEAQRDLLDAHGGHAELRQTVAQAWKQ
FT                   WRALARQLDTAEQDAEALAAERDRLQWQSDELDRLGLGPDEWDALQTEHTRLSHAQSLL
FT                   DGASRILEALDGEHDSAQHRLNGAAHQLQQMLRHDPALQGIGDELESARIAITEAVSDL
FT                   NNYVSRVELDPQRLADVEARLSAVFETARKFKCEPHDLPALRDSLHGKLAEMQAASDVQ
FT                   ALRAQAEAAQARYEAAAARLSAARRKIAKDLGKQVTQAMQTLSMQGGRFEAALTGGASS
FT                   AHGSEQVEFLVAGHAGSTPRPLAKVASGGELSRISLALSVIASRAARVPTLIFDEVDSG
FT                   VGGAVAEAVGKLLRELGQRHQVLCVTHLPQVAACAHAQYRVSKVESGGSTRSRIAELDA
FT                   EARVEEVARMLGGIKITATTRDHAREMLGGHTAPAA"
FT   misc_feature    11161..11184
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(12813..13232)
FT                   /transl_table=11
FT                   /gene="fur"
FT                   /locus_tag="BB3942"
FT                   /product="ferric ion uptake regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2507"
FT                   /db_xref="GOA:P0A3E4"
FT                   /db_xref="InterPro:IPR002481"
FT                   /db_xref="UniProtKB/Swiss-Prot:P0A3E4"
FT                   /protein_id="CAE34305.1"
FT                   /translation="MSDQSELKNMGLKATFPRLKILDIFRKSDLRHLSAEDVYRALIAE
FT                   NVEIGLATVYRVLTQFEQAGILTRSQFDTGKAVFELNDGDHHDHLICTNCGTVFEFSDP
FT                   DIEKRQYKVAKDNGFVLESHAMVLYGICGNCQKGR"
FT   misc_feature    complement(12846..13208)
FT                   /note="HMMPfam hit to PF01475, DE Ferric uptake regulator
FT                   family, score 4.8e-69"
FT   CDS             13383..13931
FT                   /transl_table=11
FT                   /gene="omlA"
FT                   /locus_tag="BB3943"
FT                   /product="outer membrane lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2508"
FT                   /db_xref="GOA:Q7WGH6"
FT                   /db_xref="InterPro:IPR007450"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGH6"
FT                   /protein_id="CAE34306.1"
FT                   /translation="MIARISLRPLKGLAVAVLAASALTACSSGKWGFPYKAGVQQGNWI
FT                   TKEQVALLQQGMSREQVRFALGSPTLTSVLHADRWDYPYYFKPGYGKAQERQFTVWFEN
FT                   DHLVRWSGDEQPDLQPFQIEKVNAKQEEKADAQVDTAEKRQEGIDKAEEVRPHVDITTP
FT                   DNPTLDYPGEPGQTFEPLK"
FT   misc_feature    13383..13457
FT                   /note="Signal peptide predicted for BB3943 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.998) with cleavage site
FT                   probability 0.346 between residues 25 and 26"
FT   misc_feature    13428..13460
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             13932..14741
FT                   /transl_table=11
FT                   /gene="dapB"
FT                   /locus_tag="BB3944"
FT                   /product="dihydrodipicolinate reductase"
FT                   /EC_number="1.3.1.26"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2509"
FT                   /db_xref="GOA:Q7WGH5"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGH5"
FT                   /protein_id="CAE34307.1"
FT                   /translation="MTQATPQRIAIAGASGRMGQMLIEAVLDTEGVELAVALDRAGSPS
FT                   IGQDAGAALGRPCGVTITDQLDALAQADCLIDFTRPEGTLQHLQACLRHDVKMVIGTTG
FT                   FDSSGRAEIEVAAQKIAIVFAPNMSVGVNATLKLLDMAARILNSGYDVEIFEAHHRNKV
FT                   DAPSGTALIMGETVASAWDVALPDVATWTRHGDTGVRKPGTIGFSVVRGGDIVGDHTVF
FT                   FCGTGERIEISHRSSSRATYAQGAVRAARFLARQDNGLYDMQAVLGL"
FT   misc_feature    13950..14516
FT                   /note="HMMPfam hit to PF01113, DE Dihydrodipicolinate
FT                   reductase, score 1.1e-69"
FT   misc_feature    14388..14441
FT                   /note="PS01298 Dihydrodipicolinate reductase signature."
FT   CDS             complement(14778..15839)
FT                   /transl_table=11
FT                   /gene="murB"
FT                   /locus_tag="BB3945"
FT                   /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
FT                   /EC_number="1.1.1.158"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2510"
FT                   /db_xref="GOA:Q7WGH4"
FT                   /db_xref="InterPro:IPR006094"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGH4"
FT                   /protein_id="CAE34308.1"
FT                   /translation="MSMSTVPARIEPVAPLAPQAQDLRCFNTLGLASHAPAFVALTEPS
FT                   QLPALSALAPRFRQLVVLGGGSNVVLPASIDGLVAQVRLPGVRLVGQCADAWVVEAAAG
FT                   ENWHGFVTVCVDNGWDGLENLALIPGTVGAAPVQNIGAYGVELADRFHSLTAWDVKGGR
FT                   WVEMGAAECRFAYRDSFFKHQEPGAWVIGSVRFALPRPWQPVLDYPDLQRHAALDGAAP
FT                   TARAVYDAVCAIRRAKLPDPAVVGNAGSFFKNPLVDAGTRQALLGRFPGLVSYPQPDGR
FT                   YKLAAGWLIDQCGWKGRQLGAAGVHDRQALVLVNRGGAQAHDIMALAAAIQGDVERRYG
FT                   VRLEPEPVVVPAR"
FT   misc_feature    complement(14787..15170)
FT                   /note="HMMPfam hit to PF02873, DE
FT                   UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal
FT                   domain, score 2.4e-47"
FT   misc_feature    complement(15129..15158)
FT                   /note="PS00205 Transferrins signature 1."
FT   tRNA            16016..16091
FT                   /note="tRNA Gly anticodon GCC, Cove score 88.26"
FT   CDS             complement(16258..17490)
FT                   /transl_table=11
FT                   /locus_tag="BB3946"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:Q7WGH3"
FT                   /db_xref="HSSP:1PQY"
FT                   /db_xref="InterPro:IPR003673"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGH3"
FT                   /protein_id="CAE34309.1"
FT                   /translation="MAVTGLLEGIRVLDMTVALAGPYASMLLGGLGAEVIRVEAPGGSD
FT                   LGRSNPPFVGPGGVNFGQQGSDDVSLTLLNRARNKKSITLNVKDPEGRALFARLLRESD
FT                   VFIENLSEGASERLGVDYARVREINDRIIYASIKAFGEPSKYQNLKGMDILVQALSGLM
FT                   AVTGEASGPPMRCGVPVADLLAPLYMVNGILAALIYRGRTGKGQKIQVSMLDCLSSWVA
FT                   EEHFDVLAQAGFRMRTGNNHERLVPFGTYECVDGHIAIAAVHPDWFASLLDAMGRADLQ
FT                   RDPRFADRGTRMRHAADLAALVSEWTRDKTVAFVEQALVQERGVPAARVRTPLEMLDDP
FT                   DLHRSGAITDLQTPDGGTVRGMGLPIGFSECHAQFDVPAQALGQANASVYADILGLSDA
FT                   EIRRLEEKGVI"
FT   misc_feature    complement(16675..17244)
FT                   /note="HMMPfam hit to PF02515, DE CAIB/BAIF family, score
FT                   1.3e-57"
FT   CDS             complement(17569..18024)
FT                   /transl_table=11
FT                   /locus_tag="BB3947"
FT                   /product="putative transcriptional regulator"
FT                   /db_xref="GOA:Q7WGH2"
FT                   /db_xref="InterPro:IPR002539"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGH2"
FT                   /protein_id="CAE34310.1"
FT                   /translation="MAGLYFEDFKAGMVVQHAIRRTVTETDNVLFSALTYNCAPLHIDA
FT                   EYSADTIYGQRLVNSMFLLALVAGVTVYETTLGTTLGNLGFGEIVFPKPTFHGDTIRVE
FT                   TEILQTRLSRSRTDSGIVTFKHVARNQRDEIVCTAVRTGLMMLRPAA"
FT   misc_feature    complement(17635..18003)
FT                   /note="HMMPfam hit to PF01575, DE MaoC like domain, score
FT                   1.3e-13"
FT   CDS             complement(18054..18941)
FT                   /transl_table=11
FT                   /gene="citE"
FT                   /locus_tag="BB3948"
FT                   /product="putative citrate lyase"
FT                   /EC_number="4.1.3.6"
FT                   /db_xref="GOA:Q7WGH1"
FT                   /db_xref="InterPro:IPR005000"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGH1"
FT                   /protein_id="CAE34311.1"
FT                   /translation="MNTRIKPVRSFLFVPGNKESMLDKAAQAGADALILDLEDSVPSPE
FT                   KTAARELVAKKIPELIAQNQRIWVRINRTAHIYDLDDILAVAPAGIEGIYISKPGGPED
FT                   VYMASCMIAEAEARANLPLGSIGLIPLLETARSMQLCYDIAQMPRVAGIVGATARNADM
FT                   GRALKFVWTAEGRETEYLKSRVVMAARAAGKQAIGGLWQQIKDLDGLAKSSAFDRQLGM
FT                   SGELVLHPMQVETINRTYTPTAEDVAYYQGMIEALDAAQAQGRASVMYEGEHIDIAHVK
FT                   TAHEVIALAQSFGN"
FT   CDS             complement(19094..19897)
FT                   /transl_table=11
FT                   /locus_tag="BB3949"
FT                   /product="putative CoA isomerase"
FT                   /db_xref="GOA:Q7WGH0"
FT                   /db_xref="InterPro:IPR018376"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGH0"
FT                   /protein_id="CAE34312.1"
FT                   /translation="MHHMTPVLVTSLSDGIFTIRLNRPNERNALNDALCAALVQACEQA
FT                   AHDPGARVVVLCAAGPAFCAGGDVKSMAAPAAAVQNKGAQRFREMKHFMTAAKLLNEMP
FT                   KPTVALVHGAAAGAGLSLALACDFRIGTPNAKLTTAFAKVGLSGDYGGTYFLQRIVGPA
FT                   KARELYLLSPVLSGREALQLGLVTRVYPEAEFEAESAAFVRALASGPTTTYGFIKDNLN
FT                   ENLICPFDDALDGEIHRHLRCKDTADYREAICAFAEKRAPVFRGH"
FT   misc_feature    complement(19325..19849)
FT                   /note="HMMPfam hit to PF00378, DE Enoyl-CoA
FT                   hydratase/isomerase family, score 2.1e-38"
FT   misc_feature    complement(19514..19576)
FT                   /note="PS00166 Enoyl-CoA hydratase/isomerase signature."
FT   CDS             complement(19948..20955)
FT                   /transl_table=11
FT                   /locus_tag="BB3950"
FT                   /product="conserved putative exported protein"
FT                   /db_xref="GOA:Q7WGG9"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG9"
FT                   /protein_id="CAE34313.1"
FT                   /translation="MSGHFGARGKRGSVGSRLAAASLFACATGLVAANVSAADRNAAPI
FT                   TIVVPFAAATATDVAARYIGQKITESTGRAVVVDNRPGANGIIGIQTAKSLPSSANVIL
FT                   MTSNTTQAANPSLFKDLPYDPVADFKPITTITIGGVLLVVNPASGIKNVSELVEAAKKN
FT                   PGKLTFGSGNSTSQAGGEMLKQAAGIDILYVPYKSSPAAMADLMGGQIDMAFSDPISVK
FT                   PLIAAGRLRAIGVTAKKRIPGFDDVPTLQEEGLKDYDLSGWIAAYTPSTASDEQVQSYS
FT                   KLIVDILKLKESEAFFGERGWRVVADSPSALASFQQAETARWKTLVETSGMKIN"
FT   misc_feature    complement(19960..20778)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 2.2e-63"
FT   misc_feature    complement(20845..20955)
FT                   /note="Signal peptide predicted for BB3950 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.825 between residues 37 and 38"
FT   CDS             complement(21277..22245)
FT                   /transl_table=11
FT                   /locus_tag="BB3951"
FT                   /product="putative transcriptional regulator"
FT                   /db_xref="GOA:Q7WGG8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG8"
FT                   /protein_id="CAE34314.1"
FT                   /translation="MSTLSIHTLTRRVDLFTLRLFLTVVEEGQIRKAAVRENIAPSAAT
FT                   KRIQDLEEIAGLPLFERQPAGVVPNAAGVVLARYIRELFGNLEEMRRELGEYSDGVRGS
FT                   LTVATTGSLIVQYVAKEIGEFSRNYPQIDLALEQHLNPDAIRAVVSGGADLAIYLVGMD
FT                   VHEEGLDVTPYRTDRLVALAPAGHPLAEKAGVTLADLLGHAFISVEPSTAMMADISKAA
FT                   KSSGLAVKPKFHVTSVEAARSLVEEGLGVTIQPECMLPVAYQRRVSVLRLDEAWALRKV
FT                   HIGTRRGRAPTAATRLLIEQLIAQPRGSDATLEAGPSVAAG"
FT   misc_feature    complement(21325..21954)
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 1.2e-39"
FT   misc_feature    complement(22024..22203)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 4.9e-14"
FT   misc_feature    complement(22069..22161)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   CDS             22636..24012
FT                   /transl_table=11
FT                   /locus_tag="BB3952"
FT                   /product="putative inner membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG7"
FT                   /protein_id="CAE34315.1"
FT                   /translation="MISPAHKTRLAAFFNLRRDELRPVLLSGLCFFCVLTALMVLRPAR
FT                   DALGMQRGIEAVRWLFMGTALVTLLVNPVFGWLVSRFSRRQFIGVTYTFFALSLAAFHQ
FT                   LLVQAPQAVGATSGQVFYVWFSVFNMFATMLFWALMADRFTLEQSRRLFALISVGGTLG
FT                   AIFGPWLASLLARPLGTPALLLVSAGFLLLAMQAAWAVGRGQAAAACAGPDSGLQATDG
FT                   QDRILIGGNAWQGLKAVFRSRYLFGIASYVIIMAIASTLLYFTRLQMVAELGDDMDLRT
FT                   TVFARIDLITQAATLALQAVVAGHVMKRLGVTITLTLLPLTVMLGFVGLAMVGTLAALI
FT                   VFEAVFRAVQRALARPARETLYTVLGREDKYKSKAFIDTFGYRSGDVAGAQVEGLLGRL
FT                   GLGLAGLASVAVPLALAWAALGLWLGRAQLRLARKAGASVPAIPAAAPDTLPATRSPPP
FT                   "
FT   misc_feature    join(22696..22764,22807..22875,22894..22953,22996..23055,
FT                   23089..23157,23170..23238,23359..23427,23485..23553,
FT                   23590..23658,23842..23910)
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB3952 by TMHMM2.0 at aa 21-43, 58-80, 87-106, 121-140,
FT                   152-174, 179-201, 242-264, 284-306, 319-341 and 403-425"
FT   CDS             24009..24941
FT                   /transl_table=11
FT                   /locus_tag="BB3953"
FT                   /product="putative oxidoreductase"
FT                   /db_xref="GOA:Q7WGG6"
FT                   /db_xref="InterPro:IPR006311"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG6"
FT                   /protein_id="CAE34316.1"
FT                   /translation="MITRRDYLKLSAAGLALAARPGLPWAADGPAGLITRTIPGTRERL
FT                   PAVGLGSSASFARIAGEDDTGRVRDVLETFVREGGTVFDTAPSYGAAEETAARIARETG
FT                   LDRKLFWATKVNVAGRGGGKADPAAARAQIDRSLARLGRPAIDLVQVHNVPTQLGLLRE
FT                   YRDAGRIRYIGVTTTFPEQYEALEQILRAEALDFIGVDYAIDHRAMEARVFPLARERGV
FT                   GVLAYQPFGRSRLWQRVKGHALPGWAAEYGIASWGQFFLKFVISHPAVTTATPATSQPR
FT                   NVVDNLRAATGPLPDPAGRRRMIEHIESL"
FT   misc_feature    24009..24086
FT                   /note="Signal peptide predicted for BB3953 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.937) with cleavage site
FT                   probability 0.799 between residues 26 and 27"
FT   misc_feature    24126..24935
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00248, DE Aldo/keto reductase
FT                   family, score 1.5e-07"
FT   CDS             25218..26246
FT                   /transl_table=11
FT                   /locus_tag="BB3954"
FT                   /product="putative periplasmic solute-binding transport
FT                   protein"
FT                   /db_xref="GOA:Q7WGG5"
FT                   /db_xref="InterPro:IPR018389"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG5"
FT                   /protein_id="CAE34317.1"
FT                   /translation="MTTLFSSLKTFGAACLLAASSVMSPGAHAQDIRVRLGHVFAIGSP
FT                   QEVAGKEFAELVKTRSNGQMEIALFPAGQLGGDEALGRELARGSLDLAFLNVAGLTGLD
FT                   PLLDIHYLPYAVSTFEEADRIHFNPDGVIQKTTRETLRKRRIEPLAFFELEFRSITNSQ
FT                   RPVATPEDLRGMKLRTPSVTNIKTLFEAAGAHPLALPFPELFTALQQGTVDGQDNGPAL
FT                   TYTSRLFEAQKYMTLTNHIYAIGAIASSERFWKRLNDEQKAIVLAAAEEAARNQIANNR
FT                   KLNREYVEKIRQGGVAVIELDAQAMRPFRELGRAQWDKLASVYGAERIQALRDELAKNN
FT                   IQ"
FT   misc_feature    25218..25304
FT                   /note="Signal peptide predicted for BB3954 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 1.000 between residues 29 and 30"
FT   misc_feature    25323..26189
FT                   /note="HMMPfam hit to PF03480, DE Bacterial extracellular
FT                   solute-binding protein, family 7, score 4.9e-70"
FT   CDS             26243..26788
FT                   /transl_table=11
FT                   /locus_tag="BB3955"
FT                   /product="putative inner membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG4"
FT                   /protein_id="CAE34318.1"
FT                   /translation="MNAAAPSPAPLAGLASGSAIDRAERWLLRGEMAVSVAALAVIMAT
FT                   VAISVAARALLLPIPNLTEWAVTAMSALTFLGASACTALRRHINIEVVDLLPAGALRFA
FT                   AHLASLLAQLVFGVMFAITAWGFFDYALDSGEKLIDLGTPVALPSGLMVAGAALIALHA
FT                   ALAIYRLVAGRPALEFAQ"
FT   misc_feature    join(26339..26407,26435..26494,26555..26623,26690..26758)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB3955 by TMHMM2.0 at aa 33-55, 65-84, 105-127 and 150-172"
FT   CDS             26785..28059
FT                   /transl_table=11
FT                   /locus_tag="BB3956"
FT                   /product="putative inner membrane protein"
FT                   /db_xref="GOA:Q7WGG3"
FT                   /db_xref="InterPro:IPR004681"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG3"
FT                   /protein_id="CAE34319.1"
FT                   /translation="MSLAFAGLFLLLIIGMPLGMAFALAVMGRAGSFNLDLDALGAIPY
FT                   ETISAVPLVAIPLFLLVGEIMNRGGLALCLSQICDRVLHFLPARMGHIAVAASGLMSAM
FT                   TGSSVATVAAIGATVGPEMTARGYKRAYSASLVAAAGLLGVLLPPSIPLILYGSVVGTS
FT                   IVDLFLATLVPGLIMAGAFFATHALRSRSALRDGVESAGAAGLDRAPAPTSGATVSALL
FT                   LPVFVLGGIYSGLTTPTEAAAVAAAAALAMTLIQRTLCWDQVPVVFTNAVKASAAILTI
FT                   IALTSLFNRALVLNQIPQDIAAFALSVTDDPIVFLLGVNLLLLLVGMFMETNAAVMLMG
FT                   PLLAPAAIKFGIDPVHFGIILVTNIEIGLITPPLAANVFVAARTLDVNMVKMLPHLAWF
FT                   FAAALSVLLLISFVPELTLWFRHFQ"
FT   misc_feature    26785..26859
FT                   /note="Signal peptide predicted for BB3956 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.335 between residues 25 and 26"
FT   misc_feature    join(26797..26865,26908..26976,27061..27129,27187..27255,
FT                   27274..27342,27421..27489,27508..27561,27604..27663,
FT                   27721..27789,27859..27927,27964..28023)
FT                   /note="11 probable transmembrane helices predicted for
FT                   BB3956 by TMHMM2.0 at aa 5-27, 42-64, 93-115, 135-157,
FT                   164-186, 213-235, 242-259, 274-293, 313-335, 359-381 and
FT                   394-413"
FT   misc_feature    27169..27651
FT                   /note="HMMPfam hit to PF00597, DE DedA family, score 0.011"
FT   CDS             28084..28845
FT                   /transl_table=11
FT                   /locus_tag="BB3957"
FT                   /product="putative transcriptional regulator"
FT                   /db_xref="GOA:Q7WGG2"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG2"
FT                   /protein_id="CAE34320.1"
FT                   /translation="MNDLHTRARTAPRALAGKRTTSAAEASDTAPGAPQPFLRDVAYEQ
FT                   IKAMLFLNEETGRAYSERQLAAQFGLGLNPVRSAIERLKLEGLVVVVPKIGIMLPEMSA
FT                   NAINDFYEIRTVIESHVALSLVGQLQPSDIERVEAILRQQEECVREGAYLDYHQLDMAF
FT                   HLSLAQIHGNEEIVQMLERLRDKMHRLSTRLHTKYPGRLGANVQQHREIFEAIKDGDAK
FT                   RAQNQMRAHLVWGKRFVLDPRSSADALLPAT"
FT   CDS             28944..29744
FT                   /transl_table=11
FT                   /locus_tag="BB3958"
FT                   /product="putative aldolase"
FT                   /db_xref="GOA:Q7WGG1"
FT                   /db_xref="HSSP:1DXE"
FT                   /db_xref="InterPro:IPR005000"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG1"
FT                   /protein_id="CAE34321.1"
FT                   /translation="MHIPDRLFAALRGRRPAYGTWAQMNSPEFCEIAASAGLDFVIVDM
FT                   EHGSFGIESAVHMTRAAQLGGATALVRTPDASRTAIFKALDTGANGVLVPNVDSPEMAA
FT                   AIVAASRYAPQGQRGACPCTRATAHGVTPWARHVEQAREHTFVAALIETPQGIANFDRI
FT                   LDVPGLDAVALGPFDLSQALGLNGDWKHPEVQAAQSRMVRQARAKGVQVMMSIFDSDPR
FT                   LLCEQIARWQDEGAALFVVSGDRFLLSSSFNALNAALPRTGLAR"
FT   misc_feature    28944..29723
FT                   /note="HMMPfam hit to PF03328, DE HpcH/HpaI aldolase
FT                   family, score 3.1e-35"
FT   CDS             29771..30676
FT                   /transl_table=11
FT                   /locus_tag="BB3959"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:Q7WGG0"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGG0"
FT                   /protein_id="CAE34322.1"
FT                   /translation="MQHTKVLITGGGGFLGAWVAKRLLARGLPVRIMDIADDRRVVRGL
FT                   LGDAADRLEWVVGDVSQAADVEAALSGCQQVVHLAGLLTPSCQLDPVKGAQVNLLGTLH
FT                   VFEAAKRQGLRHVVYTSSVSVFGPDNGLQPEPSTHYGAFKLATEGCARTYWEYDGISSV
FT                   GLRPGVVYGPGREVGLSAGPTLACRAAVRGEPYTVGYQGDTCLVYADDVAAAYEQALIA
FT                   RAPGAQVFNVSGRPTPMADILDAIRRHYPDARLGAEGPVLPFTADIPDEALYRAFPALP
FT                   RTPLDVGIGQTLAHYRPAQA"
FT   CDS             30783..31529
FT                   /transl_table=11
FT                   /locus_tag="BB3960"
FT                   /product="conserved inner membrane protein"
FT                   /db_xref="GOA:Q7WGF9"
FT                   /db_xref="InterPro:IPR002781"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF9"
FT                   /protein_id="CAE34323.1"
FT                   /translation="MDLALVLGAAFFAGILNAAAGGGSFLTLPALVAVGVPPVMANATG
FT                   TLALLPGYFAGAWAMRRDLFIEPHRVPLWRTTLIAAVGGAVGALLLLWIDQKAFRHLAP
FT                   WLLLVATLIFWCAPAMLKRTQQAAAAPGNWRGQAGLTAVSVYGGFFNGGIGIMLLALFS
FT                   ASGYQSLNTMNALKNLLSGVLTCIAVVVYVAGALINWQYALLMLGAALAGGYVGGRLAR
FT                   RIPRGALRAGIIAIGLAMTAFMFMRA"
FT   misc_feature    30783..30842
FT                   /note="Signal peptide predicted for BB3960 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.994) with cleavage site
FT                   probability 0.412 between residues 20 and 21"
FT   misc_feature    join(30810..30878,30897..30965,30993..31061,31086..31145,
FT                   31203..31271,31308..31376,31386..31442,31461..31520)
FT                   /note="8 probable transmembrane helices predicted for
FT                   BB3960 by TMHMM2.0 at aa 10-32, 39-61, 71-93, 102-121,
FT                   141-163, 176-198, 202-220 and 227-246"
FT   CDS             31616..32431
FT                   /transl_table=11
FT                   /locus_tag="BB3961"
FT                   /product="probable MerR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3110"
FT                   /db_xref="GOA:Q7WGF8"
FT                   /db_xref="InterPro:IPR000551"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF8"
FT                   /protein_id="CAE34324.1"
FT                   /translation="MPEFGITQAAQLTGTNPSTLRLWEQHGLLSPLRSPTGQRIYGEHD
FT                   LGLISTILRLRKVEGLNISAIKRALASTAPAPQDPARPKRSANTQQLGRQFRVARQKHD
FT                   MSLQEAADATGLPVSFISTFERTGQGAAVASLQRLAACYGTTVTELSAPPARSADSSAH
FT                   VVRGGKARQAPSFGAGIQIFQLAETLQSLDCQRWVLQPGAQSDGAYSHEGEEFIHVLHG
FT                   RFHISVQGLKTWELVAGDSISFDSRLLHSWSAAGDEPTVLLWVNTPRSF"
FT   misc_feature    31634..31738
FT                   /note="HMMPfam hit to PF00376, DE Bacterial regulatory
FT                   proteins, merR family, score 3.7e-06"
FT   misc_feature    31901..32065
FT                   /note="HMMPfam hit to PF01381, DE Helix-turn-helix, score
FT                   3.5e-06"
FT   CDS             32564..34003
FT                   /transl_table=11
FT                   /locus_tag="BB3962"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3109"
FT                   /db_xref="GOA:Q7WGF7"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF7"
FT                   /protein_id="CAE34325.1"
FT                   /translation="MRASTNQTLQLDRRAALPALARSYWFKQAVPQESAPQGLRGRHSV
FT                   DIAIVGGGFVGLWTALAAKAMQPTARVIVLERDLCGGGASGRNGGFAMSWWPKISTLLS
FT                   MAGRDEALRLALASERAIGELERFCLARGVDAHFVRGGWFWTATTEAQRGAWASTLQAC
FT                   ERVGHQPFTAVAPDELARRTGSPVHLEGIFDTATATVQPALLARGLRQAALDDGIEVYE
FT                   GSAVRTLHTGAPAVLGLDEAEVRAGTVVLANNVWAAAIPELAPLITPVNSALVVTEPIG
FT                   ERLQELGWRGNEAITDSQLLVGYYRKTRDGRLVFGKGSGALSSGGRIGQVFSRDPGTEA
FT                   LTEADFRRTYPELRDVAIAQAWAGPIDRTYDSLPVFGRLRGADHICYGIGWSGNGVAPS
FT                   WVGGQILAALALGRKNEWSESALVGRECRKFPPEPIRFMGGTLVRNAVLRKERDEALGR
FT                   KPAWLDTRLATLAPAGLEDKS"
FT   CDS             34017..34358
FT                   /transl_table=11
FT                   /locus_tag="BB3963"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3108"
FT                   /db_xref="InterPro:IPR014710"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF6"
FT                   /protein_id="CAE34326.1"
FT                   /translation="MKKPVVINAAPSGAFTPKTAVPGQPVAADRSTDAGLAPQEGVTAG
FT                   IWECQPGLFRRTIMQREFSHFIAGHCYFTPDGGEAIEIRAGDAVYFPADCHGVWDVRET
FT                   LRKSYLIID"
FT   CDS             34413..36170
FT                   /transl_table=11
FT                   /locus_tag="BB3964"
FT                   /product="putative gamma-glutamyltranspeptidase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3107"
FT                   /db_xref="GOA:Q7WGF5"
FT                   /db_xref="InterPro:IPR016160"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF5"
FT                   /protein_id="CAE34327.1"
FT                   /translation="MSVDAFATGQSATSTYTAHRPVIAANRHAVSSGHYLASHAAFQIL
FT                   ESGGNAVDAGVAAGLVLGVVHSDQVNIAGVAPMMIYLAAEDRVITIDGLGSWPAAASCE
FT                   RFEREFGGVVPEGLLRTVIPAAPGAWITALQRYGTRSFAEVAQYAIRFAREGFIMYPFL
FT                   ADRLQEAEAKYRRWPSNAAIYLPGGRPPRVGERFVQSDLAASLQYMADQETATAGSRVR
FT                   KLQAARDAFYQGDIASKIVAFHQENGGLLTAADLAGYAPTIEAPLSTRYGDMDVYACNF
FT                   WCQGPALLQALNILKSFDLKEMGHNSTRYIHHVAEALKLTFADREHYYADPRFIDVPAQ
FT                   TLLSDAYARQRAQLVRADRAWPEMPPCGEIAGYETLRAIHGNISREIDPPLDTSYVCVV
FT                   DRYGNAFSATPSDVSSDTIVIPGTGLCPSSRGSQSRADASHPASLAPGKRPRLTPNPAM
FT                   AIQRGKRILPLGSPGGDSQVQAMLQVLLNITLFGMDPQTAIEAPRFISYSHPDSFAPHA
FT                   YYPGRLSVEGRIPAQTEQTLAALGHDMQRWPDWLWRAGGVCAIDADLEQGIYQAGADPR
FT                   RAAAYALGW"
FT   misc_feature    34536..36152
FT                   /note="HMMPfam hit to PF01019, DE
FT                   Gamma-glutamyltranspeptidase, score 1.2e-111"
FT   misc_feature    34545..34568
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT   CDS             36220..37230
FT                   /transl_table=11
FT                   /locus_tag="BB3965"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3106"
FT                   /db_xref="GOA:Q7WGF4"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF4"
FT                   /protein_id="CAE34328.1"
FT                   /translation="MTVISRYLLGAFGRKARLACASAMLGAALLPAGAASADTYPSKPV
FT                   RLIVPYTPGGATDMVARIVAQHLGARLGQSVIVENKPGAGGNIGSQMVASALPDGYTLL
FT                   FSTTANAINESLYKDLPFDFKQAFEPVTQLVELPNVVITGPDVPVNSIAQVIALAKKDP
FT                   KALTYASAGTGTSTHLATELFKTMAGVNILHVPYKGSAPAMTDLRGGRVQLMFDNIPSA
FT                   LPQVQAGAVRALAVTSSRRSPVLPDVPTVAEAGVPGYEAVAWHGISVPAKTPAPIVERL
FT                   SGEIAQVLKQPEVVKQLTAIGATPVGSTPAQFQAHIDKELAKWQKVVAESGASLN"
FT   misc_feature    36220..36330
FT                   /note="Signal peptide predicted for BB3965 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.930 between residues 37 and 38"
FT   misc_feature    36397..37218
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 9.6e-126"
FT   CDS             37363..38136
FT                   /transl_table=11
FT                   /locus_tag="BB3966"
FT                   /product="putative molybdate-binding periplasmic protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3105"
FT                   /db_xref="GOA:Q7WGF3"
FT                   /db_xref="InterPro:IPR005950"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF3"
FT                   /protein_id="CAE34329.1"
FT                   /translation="MEYPRIPGAALLAAALLAGQASAGEVRVAVATKLAEPIRLVAASF
FT                   EKDTGNKVHYTVAPTSAFLRQIAEGADFDVLLPNNKAALSELEALDRVVPGTRHTYAQN
FT                   VLVLWSPFKDYVDDQGQVLRRNQFQRLSVASPNRVYGRPAAQVLDNLGLAKAVEDKLVE
FT                   RHDLAQSRQFVTAGGADLGIVTLSQVYANGKLQRGSAWLIPQTLYDPIEQQAVILKPGR
FT                   DNPVARSFLFYLRGPKAGSILISHGYRYQLFSESL"
FT   misc_feature    37363..37431
FT                   /note="Signal peptide predicted for BB3966 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.998 between residues 23 and 24"
FT   CDS             38166..38822
FT                   /transl_table=11
FT                   /locus_tag="BB3967"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248)
FT                   BP3104+BP3450"
FT                   /db_xref="GOA:Q7WGF2"
FT                   /db_xref="InterPro:IPR001123"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF2"
FT                   /protein_id="CAE34330.1"
FT                   /translation="MEHRHRALHLSPPPSMSLHTWLLYLIAVIGLSLTPGPNTLLALTH
FT                   GAMHGHRKALCTITGGALGFTLVIGLSMLGISALLKAWSPALILLKWIGGAYLVYLGIQ
FT                   LWRAPAVPLQAPAGSSSSARGARLFCQGLLAAVSNPKALLFFGAFLPQFIDPARSLATQ
FT                   FAVMAATFAAMEFVVEYGLARAAHKVRPFLQRAGRRFNKTCGGMFAAMGIALPGT"
FT   misc_feature    join(38223..38291,38325..38393,38421..38489,38547..38615,
FT                   38643..38711)
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB3967 by TMHMM2.0 at aa 20-42, 54-76, 86-108, 128-150 and
FT                   160-182"
FT   misc_feature    38415..38744
FT                   /note="HMMPfam hit to PF01810, DE LysE type translocator,
FT                   score 5.6e-15"
FT   tRNA            38945..39020
FT                   /note="tRNA Gly anticodon GCC, Cove score 88.26"
FT   tRNA            39081..39154
FT                   /note="tRNA Cys anticodon GCA, Cove score 68.57"
FT   CDS             39268..39651
FT                   /transl_table=11
FT                   /locus_tag="BB3968"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3449"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF1"
FT                   /protein_id="CAE34331.1"
FT                   /translation="MLTCGRRNYVRTPMPTLHFPRPSARHGARLLLALVALTLACAPMM
FT                   ARADDDDDDDDYRPRREYKEKYWDGACKVERKWKRNGEYREKRKCPGYRSGYDYGYAQP
FT                   AMVPMIPANPAIIISAPPIVIRP"
FT   misc_feature    39268..39411
FT                   /note="Signal peptide predicted for BB3968 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.998) with cleavage site
FT                   probability 0.998 between residues 48 and 49"
FT   misc_feature    39358..39390
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             39709..40311
FT                   /transl_table=11
FT                   /locus_tag="BB3969"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3448"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGF0"
FT                   /protein_id="CAE34332.1"
FT                   /translation="MDQLVKDALARWPDVPAVYGWLSLDARGRWHLHPQGDAARGAPGE
FT                   SITSPQILAFIGRNYECDAQGNWFFQNGPQRVYVRLDAAPLILRRADEFSGLQTHTGQA
FT                   VTAVRQWWLDDEGRLYASTAAGPGLVEDRELAPLLAQLHVDGQALADVLETGWPEPGRP
FT                   PLMVSHPAWPNAAPLHGVASGDVARRLGFVANPAKPA"
FT   CDS             complement(40329..40730)
FT                   /transl_table=11
FT                   /locus_tag="BB3970"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3447"
FT                   /db_xref="InterPro:IPR011637"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE9"
FT                   /protein_id="CAE34333.1"
FT                   /translation="MIDSRTAPYAVLLLRLALGVMYLAHGLTKLLVFTLPGTAQFFAKV
FT                   GFAGWLAYPVTYFEIVGGVLLILGIYPRWVAAIAAVQLLAAATVHAGNGWAFGNPGGGW
FT                   EYPVFLAVGAAALALLGNGKAALLPRPRA"
FT   misc_feature    complement(join(40347..40415,40443..40511,40530..40598,
FT                   40626..40694))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB3970 by TMHMM2.0 at aa 13-35, 45-67, 74-96 and 106-128"
FT   CDS             40864..41757
FT                   /transl_table=11
FT                   /locus_tag="BB3971"
FT                   /product="LysR family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3446"
FT                   /db_xref="GOA:Q7WGE8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE8"
FT                   /protein_id="CAE34334.1"
FT                   /translation="MQTFARVVELGSFAAAADKTDQARSVVTRQVAFLERKYGVRLLNR
FT                   TTRKLSLTDAGRAFYDRIRPVLAELAELDLALQAQGSQPAGRLRISAPVSFGVLHLGPA
FT                   IADYLLRYPEVVIDLDLNDRVVDLVEEGYDVAVRIGPLVDSSLVARPLAPQQLVACAAP
FT                   AYLERYGAPAQPEDLRRHRCLHYAYASTGNDWHFEKDGQTHVVRVNATFRANNGDVLRT
FT                   AALAGHGIILQPEFLVGEDLRAGRLTALLTDYRHSLITMMAVYPHRRFLSPKVRSFVEH
FT                   LEKRFGGARQPLESRS"
FT   misc_feature    40864..41034
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 1.8e-11"
FT   misc_feature    40897..40989
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    41104..41724
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 2.3e-59"
FT   CDS             41754..42335
FT                   /transl_table=11
FT                   /locus_tag="BB3972"
FT                   /product="putative NUDIX hydrolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3445"
FT                   /db_xref="GOA:Q7WGE7"
FT                   /db_xref="InterPro:IPR020084"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE7"
FT                   /protein_id="CAE34335.1"
FT                   /translation="MSAQQSLQYFPAPRRARFCSQCGSPVDHRVPEGDNRARDICDRCG
FT                   AIHYQNPRMVVGTVPVWENRILLCRRAIEPRYDTWTLPAGFMELGESTAQGAERETLEE
FT                   SGARIRLGQLYTVIDVPQVEQVHFFYLAEALGPGLDPGPESLEARYFDEAEIPWDDLSF
FT                   RTVVTTLRRYLEDRRKGEFPTHHYSLESHR"
FT   misc_feature    41907..42281
FT                   /note="HMMPfam hit to PF00293, DE NUDIX domain, score
FT                   2.3e-17"
FT   misc_feature    42006..42065
FT                   /note="PS00893 mutT domain signature."
FT   CDS             42340..43104
FT                   /transl_table=11
FT                   /gene="aat"
FT                   /locus_tag="BB3973"
FT                   /product="putative leucyl/phenylalanyl-tRNA--protein
FT                   transferase"
FT                   /EC_number="2.3.2.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3444"
FT                   /db_xref="GOA:Q7WGE6"
FT                   /db_xref="InterPro:IPR004616"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGE6"
FT                   /protein_id="CAE34336.1"
FT                   /translation="MKLPWLAADTPFPPVEQALRDPDGLLAAGADLSPERLAQAYAHGI
FT                   FPWYAEGEPILWWSPDPRMVLACADFAPSHSLRKRLRALARTEHDPAARLQVRVDTAFA
FT                   RVLHECAAPRHGQPGTWISPAVQQAYRSWHAAGFVHSIETWIDGELAGGLYGVSLGRMF
FT                   YGESMFARATDASKIALAHLVAFLRRHQVAWIDCQQQTGHLARLGARPVPRARFIEHIA
FT                   HAVAQPRLPWRSGRLDSAGMLHPLPPANGVMM"
FT   misc_feature    42436..42981
FT                   /note="HMMPfam hit to PF03588, DE Leucyl/phenylalanyl-tRNA
FT                   protein transferase, score 6.2e-74"
FT   CDS             43132..43866
FT                   /transl_table=11
FT                   /locus_tag="BB3974"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3443"
FT                   /db_xref="GOA:Q7WGE5"
FT                   /db_xref="InterPro:IPR007471"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGE5"
FT                   /protein_id="CAE34337.1"
FT                   /translation="MPDMSQLKELPFSTLQFYATAPYPCSYLPGRQARSQVAAPGHLIN
FT                   AGTYSQLVEQGFRRSGLFTYRPHCDNCHACVPVRVDAARFEPNRTQRRAWRSHQALRAF
FT                   VAELAWSPEHYDLYTRYQQGRHPGGGMDEDSRTQYAQFLLTTRVNTRLVEFRAPQGQLA
FT                   MISIIDVLDDGLSSVYTFYDPDMAGSLGTYSILWQIEQCRTLDLPWLYLGYWIADSRKM
FT                   AYKANFRPLQMHVDGAWRETPP"
FT   misc_feature    43336..43353
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT   CDS             43907..44956
FT                   /transl_table=11
FT                   /gene="pyrD"
FT                   /locus_tag="BB3975"
FT                   /product="dihydroorotate dehydrogenase"
FT                   /EC_number="1.3.3.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3442"
FT                   /db_xref="GOA:Q7WGE4"
FT                   /db_xref="HSSP:1F76"
FT                   /db_xref="InterPro:IPR001295"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGE4"
FT                   /protein_id="CAE34338.1"
FT                   /translation="MSILFHAYPLARPALFAMDAETAHEVTLAQLQRAYDCGLTRKLLH
FT                   AQPEAPATLMGLSLRNPVGLAAGLDKNGAHIDALGNLGFGFVEVGTVTPRAQPGNPKPR
FT                   MFRLPRANALINRLGFNNQGLDAFIANVQRSQWRSQGGILGLNIGKNADTPIERAAEDY
FT                   LIGLAGVYPHADYVTVNISSPNTKNLRALQGGDELSALLGQLQERRLALADQHQRHVPL
FT                   AVKIAPDLSDDQIDAIAEILPRHGIDGVIATNTTLARDAVQGLPHAEEAGGVSGAPVHE
FT                   LSLRVIERLRSRLGDAVAIIGVGGILSGRQASEKMAAGAQAVQLYTGLIYRGPALVGEC
FT                   VRALAQGSR"
FT   misc_feature    44051..44950
FT                   /note="HMMPfam hit to PF01180, DE Dihydroorotate
FT                   dehydrogenase, score 1.1e-127"
FT   misc_feature    44159..44218
FT                   /note="PS00911 Dihydroorotate dehydrogenase signature 1."
FT   misc_feature    44804..44866
FT                   /note="PS00912 Dihydroorotate dehydrogenase signature 2."
FT   CDS             complement(45104..45682)
FT                   /transl_table=11
FT                   /locus_tag="BB3976"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3441"
FT                   /db_xref="InterPro:IPR018968"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE3"
FT                   /protein_id="CAE34339.1"
FT                   /translation="MSAIPQQVLARQKATVNSLVAAQSAMFAGFEKLVDLNLKVVRATL
FT                   DEVAQQSQQAAELKDPQDVASFTSGLVQPGAEKALAYGKHVYDIVAGVQAELAQLAEAQ
FT                   IAEGQQQLTEAVEQFSKNAPTGSESAVALIKSSLATANSAYDSLTKAAKQAAEVAESNL
FT                   NAAANASFKAASDAAEVATKAAGRNRRAA"
FT   CDS             46069..47046
FT                   /transl_table=11
FT                   /locus_tag="BB3977"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3440"
FT                   /db_xref="GOA:Q7WGE2"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE2"
FT                   /protein_id="CAE34340.1"
FT                   /translation="MPPISRKLSALFAAVALTGAGTALAEYPERPVNMVVPFAAGGPTD
FT                   NVARSLAESMRPTLGETVVVENKGGAGGTIGTTQVARAQPDGYSILLMHAGFSTAPSLY
FT                   KNPGYEPYTSFEPIGLVVDVPMTIIARGDFPPNNIKELAEYVKKNADKISLANAGIGAA
FT                   SHLCGTMLVEALGVNLLTIPYKGTAPAMNDLLGKQVDLMCDQTTNTTQQITSGKVKAYA
FT                   VTSLKRVPTLPDLPTMDESGYKGFEVGIWHGMWAPKGTPKPVVDKLVKSLQAGLADPKF
FT                   QERMKQLGAEVLTNEANPEALQAKVKQQVPQWAELFKKAGVEKQ"
FT   misc_feature    46069..46143
FT                   /note="Signal peptide predicted for BB3977 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.986 between residues 25 and 26"
FT   misc_feature    46207..47034
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 5.8e-118"
FT   CDS             complement(47140..51534)
FT                   /transl_table=11
FT                   /gene="dnt"
FT                   /locus_tag="BB3978"
FT                   /product="dermonecrotic toxin"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3439"
FT                   /db_xref="InterPro:IPR008430"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE1"
FT                   /protein_id="CAE34341.1"
FT                   /translation="MDKDESALRQLVDMALVGYDGVVEELLALPSEESGDLAGGRAKRE
FT                   KAEFALFSEAPNGDEPIGQDARTWFYYPKYRPVAVSNLKKMQVAIRARLEPESLILQWL
FT                   IALDVYLGVLIAALSRTAISDLVFEYVKARYEIYYLLNRVPHPLAAAYLKRRRQRPVDR
FT                   SGRLGSVFEHPLWFAYDELAGTVDLDADIYEQALAESIERRMDGEPDDGSLDTAEHDVW
FT                   RLCRDGINRGEQAIFQASGPYGVVADAGYMRTVADLAYADALADCLHAQLRIRAQGSVD
FT                   SPGDEMPRKLDAWEIAKFHLAATQQARVDLLEAAFALDYAALRDVRVYGDYRNALALRF
FT                   IKREALRLLGARRGNASTMPAVAAGEYDEIVASGAANDAAYVSMAAALIAGVLCDLESA
FT                   QRTLPVVLARFRPLGVLARFRRLEQETAGMLLGDQEPEPRGFISFTDFRDSDAFASYAE
FT                   YAAQFNDYIDQYSILEAQRLARILALGSRMTVDQWCLPLQKVRHYKVLTSQPGLIARGI
FT                   ENHNRGIEYCLGRPPLTDLPGLFTMFQLHDSSWLLVSNINGELWSDVLANAEVMQNPTL
FT                   AALAEPQGRFRTGRRTGGWFLGGPATEGPSLRDNYLLKLRQSNPGLDVKKCWYFGYRQE
FT                   YRLPAGALGVPLFAVSVALRHSLDDLAAHAKSALYKPSEWQKFAFWIVPFYREIFFSTQ
FT                   DRSYRVDVGSIVFDSISLLASVFSIGGKLGSFTRTQYGNLRNFVVRQRIAGLSGQRLWR
FT                   SVLKELPALIGASGLRLSRSLLVDLYEIFEPVPIRRLVAGFVSATTVGGRNQAFLRQAF
FT                   SAASSSAGRTGGQLASEWRMAGVDATGLVESTSGGRFEGIYTRGLGPLSERTEYFIVES
FT                   GNAYRVIWDAYTHGWRVVNGRLPPRLTYTVPVRLNGQGHWETHLDVPGRGGAPEIFGRI
FT                   RTRNLVALAAEQAAPMRRLLNQARRVALRHIDTCRSRLASPRAESDMDAAIRIFFGEPD
FT                   AGLRQRIGRRLQEVRAYIGDLSPVNDVLYRAGYDLDDVATLFNAVDRNTSLGRQARMEL
FT                   YLDAIVDLHARLGYENARFVDLMAFHLLSLGHAATASEVVEAVSPRLLGNVFDISNVAQ
FT                   LERGIGNPASTGLFVMLGAYSESSPAIFQSFVNDIFPAWRQASGGGPLVWNFGPAAISP
FT                   TRLDYANTDIGLLNHGDISPLRARPPLGGRRDIDLPPGLDISFVRYDRPVRMSAPRALD
FT                   ASVFRPVDGPVHGYIQSWTGAEIEYAYGAPAAAREVMLTDNVRIISIENGDEGAIGVRV
FT                   RLDTVPVATPLILTGGSLSGCTTMVGVKEGYLAFYHTGKSTELGDWATAREGVQALYQA
FT                   HLAMGYAPISIPAPMRNDDLVSIAATYDRAVIAYLGKDVPGGGSTRITRHDAGAGSVVS
FT                   FDYNAAVQASAVPRLGQVYVLISNDGQGARAVLLAEDLAWAGSGSALDVLNERLVTLFP
FT                   APV"
FT   misc_feature    complement(47563..47586)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(51735..52583)
FT                   /transl_table=11
FT                   /locus_tag="BB3979"
FT                   /product="IclR family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3438"
FT                   /db_xref="GOA:Q7WGE0"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGE0"
FT                   /protein_id="CAE34342.1"
FT                   /translation="MSRIPNATARGPGSHSDDGAGQHPIAIQVIDRAMRLLDALAAQPE
FT                   PVTLKELSATTGLHASTAHRILNDLVVGRYVERVDNGLYQLGMRLLELGSLVKGRLNVR
FT                   EAAIGAMRSLHKQTGQTINLSVQQGDEIVYIDRAWSERSGMQVVRAIGGRAPLHLTSTG
FT                   KLFLSTYDTRLVRAYALRTGLAGHTRNSLTELDRLERELALVRRHGYARDNEELELGVR
FT                   CIAAGIYDDTGKLVAGLSISAPAERLQDEWIRLLVDAAASISEALGYEPGVNGIHAPAA
FT                   A"
FT   misc_feature    complement(51786..52334)
FT                   /note="HMMPfam hit to PF01614, DE Bacterial transcriptional
FT                   regulator, score 2e-51"
FT   misc_feature    complement(51894..51959)
FT                   /note="PS01051 Bacterial regulatory proteins, iclR family
FT                   signature."
FT   CDS             complement(52741..53553)
FT                   /transl_table=11
FT                   /locus_tag="BB3980"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3437"
FT                   /db_xref="GOA:Q7WGD9"
FT                   /db_xref="InterPro:IPR001453"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD9"
FT                   /protein_id="CAE34343.1"
FT                   /translation="MAAESARRIGLIIVGDEILSGRRQDKHFSKVVELLGARGLKLSWA
FT                   ELLPDDRATLAAVLRRSFASGDIVFSCGGIGGTPDDHTRQAAAEALDLPLALHPEAEQA
FT                   IALRAAEMAAKGQGTADMGTPENQQRLQMGMFPRGCEIVPNPYNRIPGFFVRDHTFVPG
FT                   FPVMAWPMLEWTLDTRYRALHHQVRHAEHSFLVFDMPESRITPAMVEIEQRWPGVRAFS
FT                   LPSVGETGGPSHIDLGVKGEPEAAAQALAFLRAEVVRLGGKLAPPAQN"
FT   CDS             complement(53606..54406)
FT                   /transl_table=11
FT                   /locus_tag="BB3981"
FT                   /product="putative inner membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3393"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD8"
FT                   /protein_id="CAE34344.1"
FT                   /translation="MTVPRPESIIPPAGNAATGAAGIARAFKRALVSQCHPNMLFAVLL
FT                   PFLIALLGAILLLWLFWTPLNEWLRFEASQWQAINQVDDWMVAAGLFSLKIYLVPVIAA
FT                   AILLPISGILGLAIAAVFVMPLVLRHVGGREYAGLARQGRNATAVSVWNALWVSLAFGA
FT                   GWLLTLPFWLIPPMAVILSVFWWAFAFTRMLRLDAIVEHASPAERAILLKRHNSGFWLI
FT                   GLVCSLLNLLPPAWIILPVFSGLVYAHYGLDALQRLRQERTIDV"
FT   misc_feature    complement(join(53687..53755,53837..53896,53906..53965,
FT                   54026..54121,54221..54289))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB3981 by TMHMM2.0 at aa 40-62, 96-127, 148-167, 171-190
FT                   and 218-240"
FT   CDS             54468..54851
FT                   /transl_table=11
FT                   /locus_tag="BB3982"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3394"
FT                   /db_xref="GOA:Q7WGD7"
FT                   /db_xref="InterPro:IPR012335"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD7"
FT                   /protein_id="CAE34345.1"
FT                   /translation="MPLHVPGSDIPTLRAALARSDAWLVACFCAAWCDTCQQYRPKLLE
FT                   LARARPGHTFAWIDIEDHPDLLGEEDVENFPTLLVQAHGKVLFYGPMLPHIGHLERLLD
FT                   SLDPQGRPVATGLPDVARLLAAA"
FT   CDS             complement(54863..56134)
FT                   /transl_table=11
FT                   /locus_tag="BB3983"
FT                   /product="putative ATP-dependent RNA helicase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3395"
FT                   /db_xref="GOA:Q7WGD6"
FT                   /db_xref="HSSP:1HV8"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD6"
FT                   /protein_id="CAE34346.1"
FT                   /translation="MMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTP
FT                   TRELADQVYESVKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVATPGRLLDHVEQ
FT                   KNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLLPAQRQGLLFSATFSNEIRKLGRSY
FT                   LNHPVEIEVAARNATADTVTQIAYQMHGDTKRAAVVHLVKSRGLKQVIVFSNTKIGTAR
FT                   LARQLERDGVKAESIHGDKTQGDRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVIN
FT                   YDLPYNAEDYVHRIGRTGRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPAD
FT                   LVARSHGRDRDAPRERERGADRHRGERRTSGAAAPRQPVDELFYKPYEPANGQPASPET
FT                   PKQEGRSNAPKRQLAVLLGGSRKG"
FT   misc_feature    complement(55229..55444)
FT                   /note="HMMPfam hit to PF00271, DE Helicase conserved
FT                   C-terminal domain, score 7.3e-34"
FT   misc_feature    complement(55580..56134)
FT                   /note="HMMPfam hit to PF00270, DE DEAD/DEAH box helicase,
FT                   score 4.4e-56"
FT   misc_feature    complement(55763..55789)
FT                   /note="PS00039 DEAD-box subfamily ATP-dependent helicases
FT                   signature."
FT   misc_feature    complement(56099..56122)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(56589..56918)
FT                   /transl_table=11
FT                   /locus_tag="BB3984"
FT                   /product="putative conserved inner membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3396"
FT                   /db_xref="InterPro:IPR008407"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD5"
FT                   /protein_id="CAE34347.1"
FT                   /translation="MSDRDLYVYGAILLLTLCSVLTRAGFMLFGDYIPLPDGVRRALRY
FT                   APAAALTAIVVPDLLPWKAGLGPAFDYKLVAGVLAIMAFLRTRSAVLVIVVGMVALWGL
FT                   RWLAG"
FT   misc_feature    complement(join(56607..56675,56832..56900))
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB3984 by TMHMM2.0 at aa 7-29 and 82-104"
FT   CDS             complement(56921..57589)
FT                   /transl_table=11
FT                   /locus_tag="BB3985"
FT                   /product="putative inner membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3397"
FT                   /db_xref="InterPro:IPR011606"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD4"
FT                   /protein_id="CAE34348.1"
FT                   /translation="MRAITPALIATGTWGMVTGVAMVKSGLTESMALAMTLLMYAGSAQ
FT                   LTSLPLIATGAPLWLIFAAGFVVNLRFLIFGAALHPYFRHMSWPRRLGLGYFTTDMGFV
FT                   LFMPRFGDAAERGTREQLWFFLGTVAPGWMVWQVTSIVGIYLGSLVPEAWSLDFAAVLA
FT                   LLAITVPLANSKPMLVSMLAAGMVAWVGQLLPLRLGLAAAVVAGIVAGIWAERFFKGRT
FT                   "
FT   misc_feature    complement(join(56948..57016,57074..57133,57152..57220,
FT                   57263..57316,57353..57421,57464..57532))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB3985 by TMHMM2.0 at aa 20-42, 57-79, 92-109, 124-146,
FT                   153-172 and 192-214"
FT   misc_feature    complement(57089..57577)
FT                   /note="HMMPfam hit to PF03591, DE AzlC protein, score
FT                   4.9e-21"
FT   misc_feature    complement(57521..57589)
FT                   /note="Signal peptide predicted for BB3985 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.814) with cleavage site
FT                   probability 0.394 between residues 23 and 24"
FT   CDS             57853..58773
FT                   /transl_table=11
FT                   /gene="ilvE"
FT                   /locus_tag="BB3986"
FT                   /product="branched-chain amino acid aminotransferase"
FT                   /EC_number="2.6.1.42"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3398"
FT                   /db_xref="GOA:Q7WGD3"
FT                   /db_xref="HSSP:1IYE"
FT                   /db_xref="InterPro:IPR005785"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD3"
FT                   /protein_id="CAE34349.1"
FT                   /translation="MSMSDRDGFIWYDGKLVPWREATTHVLTHSLHYGLSVFEGVRAYE
FT                   TAAGTAIFRLQDHTNRLFNSAHIYQIPLPYDRDTLNEAQREVVRANGLASCYLRPLAFY
FT                   GSEKMGVSPKGAQVHVAIAAWPWGAYLGETALAQGIRVKVSSFARQHVNVTMPRAKVAT
FT                   TYANSIIANAEALQDGYDEALLLDTEGFVAEGAGENIFIVKDGVLCEPEIASALTGITR
FT                   STIHALAADLGLRVVTKRLTRDDVYIADEAFFTGTAAEVTPIREVDNRQIGAGRRGPVT
FT                   EKLQQAFFDLVNGRNPKYQHWLTPV"
FT   misc_feature    57889..58719
FT                   /note="HMMPfam hit to PF01063, DE Aminotransferase class
FT                   IV, score 1.3e-91"
FT   CDS             58820..59032
FT                   /transl_table=11
FT                   /locus_tag="BB3987"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3399"
FT                   /db_xref="InterPro:IPR019401"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD2"
FT                   /protein_id="CAE34350.1"
FT                   /translation="MTAAAQAAVPAHDAIEVGAEDLPVYCPGPKAPLWSMHPRVFLDVT
FT                   HTGQASCPYCGAAYRLKPGTVVHGH"
FT   CDS             59055..59477
FT                   /transl_table=11
FT                   /locus_tag="BB3988"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3400"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD1"
FT                   /protein_id="CAE34351.1"
FT                   /translation="MFATPDEAEHAFYEALEHADLDRLMQVWSDDEEIACIHPGGLRIV
FT                   GHTAVHESWQQVLANGPLHLRPLRPLVMQSMMCAVHVLVEQVTVMTREGAQFANCYATN
FT                   VYHKGPAGWRMVLHHASQAPAEAGVLDLHDFPDRLH"
FT   CDS             59494..60594
FT                   /transl_table=11
FT                   /locus_tag="BB3989"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3401"
FT                   /db_xref="GOA:Q7WGD0"
FT                   /db_xref="InterPro:IPR000073"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGD0"
FT                   /protein_id="CAE34352.1"
FT                   /translation="MAASRIDLTPCPVPPWLPDRHSQTVYAAVLAQYHRIAFVRERVDT
FT                   PDTDFVDFDWTGPGLFPHKTAEGAAPAGPAPQGNGRIAAARWITATDWASLPQTADTPA
FT                   LILFHGLEGGSTSRYAQSIAHYFRARGWIVVIAHFRGCSGVPNRLARAYYSGDSAEVGF
FT                   MLDTVRARIPHARWHAVGVSLGGNALLKYLGEHHDEASWLAAAAGVSVPLDLVAGGKAL
FT                   CTGFIARRIYTAYFLKTMRRKVLEKAKRFPGAIDVIRIAHARDLRDFDDAYTARMHGYR
FT                   NALDYWTRASSKPWLAHIKTPTLVLNARNDPFLPESALPIPAECSDSVLLHQPAEGGHA
FT                   GFPTGPFPAHLNWLPQRLGRFFEMGS"
FT   CDS             complement(60691..62208)
FT                   /transl_table=11
FT                   /locus_tag="BB3990"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3402"
FT                   /db_xref="GOA:Q7WGC9"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC9"
FT                   /protein_id="CAE34353.1"
FT                   /translation="MNRWNLTFSPSLGRRALAAALSLALGLPVAPAVGQPSGLPSMGAA
FT                   SASELSPMLERQLGDAIMAQGRRDPTYINDPELRQYLTTMGRKLASFAPGAAPHVEMFG
FT                   VRDPEINAFAMPGGYIGVNTGLIVSSASESELAAVLAHEIGHVAQRHIARGMTQQNQNS
FT                   MVMLASLAGALLAALAGGGGNLAMGVAAFGQAAAINRQLGFSRDAEREADRTGLQMLAK
FT                   AGYDPDGMAQMFSRLMNASRLNEGMGGGAWASTHPLSIDRMSDVQNRIRGLPGSRHVDS
FT                   DDFWFIRAKMRVAQGRDALSLRTAQQQLQDESRALSGVRQAAAFYGLALYAFQRNDLAQ
FT                   ARAFLEQAGAGGRSSPQMARLAIDVAVAAKDNDQALALAQAAVKRWPDRKALGIAYAQA
FT                   LQAAGRHADAQAYLRERARQWGGDEPSLYQLLAQSEERTGHPVDARRNMARYYDLTGAY
FT                   ASAESQLQQARGLSNDFYEQSQIDVSIREIKQKLADERQLLERFKSG"
FT   misc_feature    complement(61600..61674)
FT                   /note="PS00583 pfkB family of carbohydrate kinases
FT                   signature 1."
FT   misc_feature    complement(62107..62208)
FT                   /note="Signal peptide predicted for BB3990 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.802 between residues 34 and 35"
FT   CDS             62284..63123
FT                   /transl_table=11
FT                   /locus_tag="BB3991"
FT                   /product="putative UTP--glucose-1-phosphate
FT                   uridylyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3403"
FT                   /db_xref="GOA:Q7WGC8"
FT                   /db_xref="InterPro:IPR005835"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC8"
FT                   /protein_id="CAE34354.1"
FT                   /translation="MQVVRKAVFPVAGMGTRFLPATKAMPKEMLPVVDKPLIQYAVEEA
FT                   VAAGITDLIFVTGRNKRAIEDHFDAAPELETDLEAKGKHELLALVRDILPAHVNCLYIR
FT                   QSAPLGLGHAVLTAAPAVGNEPFAVLLADDLIDADTPVLKQLIDVAVARQGSVLGVQEV
FT                   PREDTRKYGIVASQPVDARTERVTHIVEKPAPEQAPTTLAVVGRYVLEAAIFDHLRATT
FT                   VGAGNEIQLTDGIAALLRERDVYAHRYDGKRYDCGSKAGMFQATVALGRKYHGLIPE"
FT   misc_feature    62299..63099
FT                   /note="HMMPfam hit to PF00483, DE Nucleotidyl transferase,
FT                   score 8.4e-19"
FT   CDS             complement(63145..64026)
FT                   /transl_table=11
FT                   /locus_tag="BB3992"
FT                   /product="putative inner membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3404"
FT                   /db_xref="InterPro:IPR019108"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC7"
FT                   /protein_id="CAE34355.1"
FT                   /translation="MTRMDWLEWLIPWEFSPTLVAAFVVAIVLFVRGQRVHHVTAARQW
FT                   LFWSGMVLLYLSMHTRLDYYAERMFFIHRAQHLVLHHLGPLLVMAAFPGSAMRAGLPMA
FT                   WRVRLRDFLRTGTGRALAAVLTHKVFVPTLFVFLVLVWLLPSVQFYSMLDWRLYRLMNW
FT                   SVVISGFMYWNLILDRRPSPPAAMTPGGRVLSPALTMAPQMVAGAVIAFTERDLYPLFE
FT                   LCGRAIAMSAQTDQTIGGLTMWIPAALVEVVGLLVALGTLMRLSGKGRLRPQDRAARAR
FT                   QRAAGSPTSPAA"
FT   misc_feature    complement(join(63241..63309,63391..63459,63496..63555,
FT                   63598..63666,63724..63792,63835..63894,63931..63999))
FT                   /note="7 probable transmembrane helices predicted for
FT                   BB3992 by TMHMM2.0 at aa 10-32, 45-64, 79-101, 121-143,
FT                   158-177, 190-212 and 240-262"
FT   CDS             complement(64108..65202)
FT                   /transl_table=11
FT                   /gene="ompQ"
FT                   /locus_tag="BB3993"
FT                   /product="outer membrane porin protein OmpQ"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3405"
FT                   /db_xref="GOA:Q7WGC6"
FT                   /db_xref="InterPro:IPR002299"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC6"
FT                   /protein_id="CAE34356.1"
FT                   /translation="MRRLLVVAAMAAGSSSVFWSVAPARAANQLELYGVVDVGLATTRV
FT                   SGLGTRQQVLGGGQTDNLWGLRGTEELDGGWRASFGLESGFDAANGTRNDDARLFDYGT
FT                   WVGLGHAGVGELSLGRQQSIGLQYGGQLEIASWRDMGMGALFKASDNYRVNNLVNYLSP
FT                   EFSGWQWGVGYAFDVESGDTGRFDRSPAFSTGLKYEDGPLLAAFTWDKLNLHDTSATGG
FT                   RSPQALQAGFTYDFEALKMALAWSRQRNGFVGLNGGGQIGLGPEPFAHGGAINAWLLGL
FT                   EVPVHGNGAWLVQGSMARPDWHWANGQQASKAYVVTLGYRQDLSARTSLYAYGGYMKGY
FT                   DPEDPFASDVGRATRFGVGMTQRF"
FT   misc_feature    complement(64114..65130)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00267, DE Gram-negative porin,
FT                   score 0.024"
FT   misc_feature    complement(65125..65202)
FT                   /note="Signal peptide predicted for BB3993 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.963 between residues 26 and 27"
FT   CDS             complement(65460..65819)
FT                   /transl_table=11
FT                   /locus_tag="BB3994"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3409"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC5"
FT                   /protein_id="CAE34357.1"
FT                   /translation="MRFFDLFLRRAGVDRTHALSQRRGTSRLTFVCPRDALGAVRKQIC
FT                   LDFSAAGLSVAQFQVDSGRDAELASACITVSCPPELRAELMSQARRLSANPAVQQLRFG
FT                   AAEPAGARACAEAVA"
FT   CDS             complement(66201..67208)
FT                   /transl_table=11
FT                   /locus_tag="BB3995"
FT                   /product="putative Ca2+/Na+ antiporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3410"
FT                   /db_xref="GOA:Q7WGC4"
FT                   /db_xref="InterPro:IPR004837"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC4"
FT                   /protein_id="CAE34358.1"
FT                   /translation="MFITLLLFFLSAAIIYFACEFFVNGVEWVGHRFKLGATATGTVLA
FT                   AFGTALPESAVTFMAVVFGTTPEQKDIGVGAAMGGPLVLATLAYAVVGLTLARTRRAGS
FT                   SQVEAAINADQRRLARDQAWFMGVFVFKVALGLLAFAWKPWLGLLFLAVYGLYVKRELT
FT                   REEECLDCEDLEPLKLRPRDPSPSLFWACTQTVLALAVIALASHVFVRQIELLGLAMGA
FT                   SPHVAALLLAPVATELPEIMNALIWVRQGKERLALANISGAMMIQATIPSALGIFLTPW
FT                   LLDAPLLAAGGFTLAAILLLWLRFRRAAMSVPALSAVGGLYALFAGYLGWHFYA"
FT   misc_feature    complement(join(66207..66275,66300..66368,66378..66446,
FT                   66579..66647,66783..66842,66927..66995,67023..67091,
FT                   67128..67196))
FT                   /note="8 probable transmembrane helices predicted for
FT                   BB3995 by TMHMM2.0 at aa 5-27, 40-62, 72-94, 123-142,
FT                   188-210, 255-277, 281-303 and 312-334"
FT   misc_feature    complement(66711..67172)
FT                   /note="HMMPfam hit to PF01699, DE Sodium/calcium exchanger
FT                   protein, score 5.9e-05"
FT   misc_feature    complement(67155..67208)
FT                   /note="Signal peptide predicted for BB3995 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.925) with cleavage site
FT                   probability 0.709 between residues 18 and 19"
FT   CDS             67525..68865
FT                   /transl_table=11
FT                   /locus_tag="BB3996"
FT                   /product="putative Xaa-Pro aminopeptidase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3411"
FT                   /db_xref="GOA:Q7WGC3"
FT                   /db_xref="HSSP:1A16"
FT                   /db_xref="InterPro:IPR000994"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC3"
FT                   /protein_id="CAE34359.1"
FT                   /translation="MSLPPDDIAPFAARRRRLMDHMRAAGGGIAILPTAPQALRNRDAE
FT                   YPYRHDSDFFYLTGFTEPEAWLVLVAGATDRALLFCRDKHPEHEIWEGFRFGPEAAAAR
FT                   FGFDDAHGIGTLDELVPALLLDQPALWTPVAASAALDERVRGWLAAARAQGRSGRLAPA
FT                   VLRDPAPVLAGMRLVKDAAEIAAMRRAAKISAAAHQRAMRAARPGMREYELEAELLYEF
FT                   RRQGAQSVAYNSIVAAGANACVLHYPAGDAELRDGDLVLIDAGCEYDSYAADITRTFPV
FT                   NGRFSGPQRALYDLVAHAQEAAVAATGPGRSWNDGHEAAVRVLAQGMLDEKLLTGSLDG
FT                   VLESGAYSRFYMHRTGHWLGLDVHDVGDYRGAGPAGAQRPWRMLEPGMMLTVEPGIYVR
FT                   AADDVPARFWDIGIRIEDDALVTEEGCELITRGVPVQAREIEALMRE"
FT   misc_feature    68053..68841
FT                   /note="HMMPfam hit to PF00557, DE metallopeptidase family
FT                   M24, score 5.8e-82"
FT   misc_feature    68581..68619
FT                   /note="PS00491 Aminopeptidase P and proline dipeptidase
FT                   signature."
FT   CDS             complement(68875..69327)
FT                   /transl_table=11
FT                   /locus_tag="BB3997"
FT                   /product="putative inner membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3412"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC2"
FT                   /protein_id="CAE34360.1"
FT                   /translation="MTQAHLSVPGAARRPRSKIALGLLACALGWIGAHWWYLGRRRAWM
FT                   VTLAAILCLAATQWFPVWYDNPAFFLLFIPMIDGFIEGVVFSLMPDEKFDRLYNPGLGQ
FT                   VSRTGWGPVLVAIFGVLVGAIASMFAVAMVVVYTWVAMGWLDGYVF"
FT   misc_feature    complement(join(68905..69000,69061..69129,69142..69201,
FT                   69214..69270))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB3997 by TMHMM2.0 at aa 20-38, 43-62, 67-89 and 110-141"
FT   CDS             69424..70605
FT                   /transl_table=11
FT                   /locus_tag="BB3998"
FT                   /product="putative monooxygenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3413"
FT                   /db_xref="GOA:Q7WGC1"
FT                   /db_xref="InterPro:IPR018168"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC1"
FT                   /protein_id="CAE34361.1"
FT                   /translation="MRCMTLPAYDIAILGAGPVGRVLALLLARLTPQPQRIALLQGGAG
FT                   LPPTPAGTLGPAADPRVLALNHGSRVLLESLRAWPAHAAEIRHIHVSQRGRLGRTVIDR
FT                   EDFDVPQLGNVVAYAALHAQLEQAVQDCGVTVLSGPPARVDGQDGEGLTVRQGDAALHC
FT                   RLAVQCDGAGGSDVRRDYAQHAVLTSAHATLPRSGWAWERFTNEGPLAMLPHPQTPEAY
FT                   SVVWCCAPPRARRLAGLDDEAFSRELTEAFGTRLGRLRSAAPRHVFPLELKARHAQAHG
FT                   RLATIGNAAQTLHPVAGQGLNLGLRDAAQLAHALPDWLAAPQADPSPLLATFARARLAD
FT                   RWVTAGLTDLMPRIFATGLAPVEHACGLALLGLDIAAPLRAPLARHLLQGLRV"
FT   misc_feature    69907..70470
FT                   /note="HMMPfam hit to PF01360, DE Monooxygenase, score
FT                   4e-08"
FT   misc_feature    70303..70344
FT                   /note="PS01304 ubiH/COQ6 monooxygenase family signature."
FT   CDS             70665..71696
FT                   /transl_table=11
FT                   /locus_tag="BB3999"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3414"
FT                   /db_xref="GOA:Q7WGC0"
FT                   /db_xref="InterPro:IPR018517"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGC0"
FT                   /protein_id="CAE34362.1"
FT                   /translation="MRMRIGPWSLPNNVLVAPMAGVTDRPYRQLCKRLGAGYAVSEMAA
FT                   SNPRLWDSVKTSRRLNHEGEIDPISVQIAGADPTMMAEAAAFNVAKGARIIDINMGCPV
FT                   KKVCNVASGSALLRHEDLIVRILEAVVAACAPLGVPVTLKTRTGWDREHRNALRVGRLA
FT                   EQAGIAALTLHGRTRADLYTGQAEYDTIRAVKAELKIPVIANGDIDSPEKARQVLDYTG
FT                   ADAVMIGRAAQGRPWIFREIDHYLRTGARLAPPSYGEMRDLLLEHLDDHYRFYGEHTGV
FT                   RTARKHIGWYLDDLPGAAAFCARMNQIDNTREQWRAVADWFDTILREGRDQQAFVAQPL
FT                   LAA"
FT   misc_feature    70707..71642
FT                   /note="HMMPfam hit to PF01207, DE Dihydrouridine synthase
FT                   (Dus), score 3.5e-123"
FT   misc_feature    70950..71006
FT                   /note="PS01136 Uncharacterized protein family UPF0034
FT                   signature."
FT   CDS             71737..71976
FT                   /transl_table=11
FT                   /gene="fis"
FT                   /locus_tag="BB4000"
FT                   /product="DNA-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3415"
FT                   /db_xref="GOA:Q7WGB9"
FT                   /db_xref="HSSP:1ETY"
FT                   /db_xref="InterPro:IPR020441"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB9"
FT                   /protein_id="CAE34363.1"
FT                   /translation="MSKKDVLEECVRASLERYFEDLGDSEPHDMWDMVMRCVERPVLEV
FT                   ALERSGGNQSRASEMLGITRNTLRKKLLAHNIQP"
FT   misc_feature    71839..71961
FT                   /note="HMMPfam hit to PF02954, DE Bacterial regulatory
FT                   protein, Fis family, score 1.9e-13"
FT   CDS             72046..73635
FT                   /transl_table=11
FT                   /gene="purH"
FT                   /locus_tag="BB4001"
FT                   /product="bifunctional purine biosynthesis protein"
FT                   /EC_number="2.1.2.3"
FT                   /EC_number="3.5.4.10"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3416"
FT                   /db_xref="GOA:Q7WGB8"
FT                   /db_xref="HSSP:1PKX"
FT                   /db_xref="InterPro:IPR011607"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB8"
FT                   /protein_id="CAE34364.1"
FT                   /translation="MKIETALLSVSDKTGIVEFARALTARGVRLLSTGGTARLLSEAGL
FT                   AVTEVAQHTGSPEILEGRVKTLHPKIHGGLLARRDSAEHMDTIAACGIDRIDMLVVNLY
FT                   PFRETVAKPDCTFADAIENIDIGGPAMLRAAAKNHGTDAGGVTVVIDPADYSRVLAQMD
FT                   QGGSTSYALRLELAAKVYSHTAAYDGAIAAYLTSLAEAAPAQDAVPARNEWPGTLTIQV
FT                   RQEQALRYGENPHQTAAFYVDAQRPAGLLGNYRQLQGKELSYNNIADADAAWECVRSFD
FT                   STACVIVKHANPCGVAIGDGTLHAYQQAFKTDPTSAFGGIIAFNRPVDAATAEAVSGQF
FT                   LEVLLAPAYDGAALAILAAKKNVRVLEVPAGPGQNAFDIKRVGGGWLVQSPDAYNVPRD
FT                   ALKVVSKRQPTEQEMNDLAFAWKVAKYVKSNAIVFVGGGMTLGVGAGQMSRIDSARIAS
FT                   IKAENAGLTLRGSAVASDAFFPFRDGLDVVVAAGATCVIQPGGSVRDDEVIAAADEHGI
FT                   AMVLTGTRHFRH"
FT   misc_feature    72061..72435
FT                   /note="HMMPfam hit to PF02142, DE MGS-like domain, score
FT                   1.4e-52"
FT   misc_feature    72313..72342
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT   misc_feature    72448..73428
FT                   /note="HMMPfam hit to PF01808, DE AICARFT/IMPCHase
FT                   bienzyme, score 2e-153"
FT   CDS             73635..74183
FT                   /transl_table=11
FT                   /gene="ruvC"
FT                   /locus_tag="BB4002"
FT                   /product="crossover junction endodeoxyribonuclease"
FT                   /EC_number="3.1.22.4"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3417"
FT                   /db_xref="GOA:Q7WGB7"
FT                   /db_xref="InterPro:IPR002176"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGB7"
FT                   /protein_id="CAE34365.1"
FT                   /translation="MRVLGIDPGLRRTGFGVIDAEGMRLRYVASGTIVVPPALALPERL
FT                   KVILDNLREVARETRPDVAALEIVFLNTNPASTLLLGQARGAALCALADSALDVHEYTA
FT                   LQIKKAVVGTGRAAKEQVQMMVQRLLSLDGTPAPDSADALACAICHAHVGPLHDKLDRL
FT                   GTAAQLGSRPRLRNGRLVG"
FT   misc_feature    73641..74084
FT                   /note="HMMPfam hit to PF02075, DE Crossover junction
FT                   endodeoxyribonuclease RuvC, score 3.2e-69"
FT   misc_feature    74070..74087
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT   CDS             74264..74836
FT                   /transl_table=11
FT                   /gene="ruvA"
FT                   /locus_tag="BB4003"
FT                   /product="holliday junction DNA helicase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3418"
FT                   /db_xref="GOA:Q7WGB6"
FT                   /db_xref="InterPro:IPR011114"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGB6"
FT                   /protein_id="CAE34366.1"
FT                   /translation="MIGRITGTLIEKSPPVVCVDVNGVGYEIDVPMSTLYALPETGARV
FT                   TLFTHLVVREDAQLLYGFGSSAERSTFRELIKVTGIGARTALAVLSGLSVAELSQAITL
FT                   QETGRLTRVPGIGKKTAERLLLEMRGKLGADIGATPHAASGHQSDILNALLALGYSDKE
FT                   SQAALKKLPDGVDVSEGIRLALKALVR"
FT   misc_feature    74264..74452
FT                   /note="HMMPfam hit to PF01330, DE RuvA N terminal domain,
FT                   score 1.1e-29"
FT   misc_feature    74375..74392
FT                   /note="PS00343 Gram-positive cocci surface proteins
FT                   'anchoring' hexapeptide."
FT   misc_feature    74456..74674
FT                   /note="HMMPfam hit to PF02904, DE RuvA central domain II,
FT                   score 1.8e-31"
FT   CDS             complement(74855..75766)
FT                   /transl_table=11
FT                   /locus_tag="BB4004"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3419"
FT                   /db_xref="GOA:Q7WGB5"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB5"
FT                   /protein_id="CAE34367.1"
FT                   /translation="MRILVIGGTGFIGRHLVARLAAQEHKVLVPTRRYNKGRDLQVLPT
FT                   VTLIEADVHDDAELDRLMHRCDAVVNLVGVLHGGRGRPYGAGFARAHVLLPERIAQACV
FT                   RNGVARMLHVSALGADSGGPSMYLRSKGDGEAAIQRVFGATGGWTLFRPSVVFGPDDNF
FT                   TRMFARLARLFPVLPLAGARSRMQPVYVGDVADAMMAALANGHTAGKIYELCGPQVYTL
FT                   GEIVRLCALWSGHPRPVCEMPMALGRMQALLFECLPGDPLVSRDNLDSLTRDNVASGAA
FT                   PSGLAAPPAALEAVAPAYLARR"
FT   CDS             complement(75840..76808)
FT                   /transl_table=11
FT                   /locus_tag="BB4005"
FT                   /product="putative serine/threonine dehydratase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3420"
FT                   /db_xref="GOA:Q7WGB4"
FT                   /db_xref="InterPro:IPR001926"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB4"
FT                   /protein_id="CAE34368.1"
FT                   /translation="MQPQLPTYADVEQAAATLAGVAHRTPVLTSATADAMAGAQVFFKC
FT                   ENFQRMGAFKFRGGYNAIARLTPEQRRAGVVTFSSGNHAQAIALAARLQGVQATIIMPQ
FT                   DAPAAKRAATEGYGGRVVTYDRYSEDREAIARRLHEETGATLIPPYDHADVIAGQGTAA
FT                   KELFDEVGELDFLFVCLGGGGLLAGSALAARALSPACRVYGVEPAAGNDGQQSLRKGEI
FT                   VTIAAPKSIADGAVTTHLGRLTFAIIQQQVADILTVSDAELVQSMRFFAERMKMVVEPT
FT                   GCLAATAALRKLIPEAAGKRVGVIISGGNVDLPVYARLLAD"
FT   misc_feature    complement(75882..76757)
FT                   /note="HMMPfam hit to PF00291, DE Pyridoxal-phosphate
FT                   dependent enzyme, score 2.8e-77"
FT   CDS             76931..78004
FT                   /transl_table=11
FT                   /gene="ruvB"
FT                   /locus_tag="BB4006"
FT                   /product="holliday junction DNA helicase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3421"
FT                   /db_xref="GOA:Q7WGB3"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGB3"
FT                   /protein_id="CAE34369.1"
FT                   /translation="MAIQSDSLSSLPDSPRIVAPQPVSPNEESIERALRPKALEEYVGQ
FT                   QRAREQLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQLRQTSGPVLER
FT                   PGDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDFQIDILIGEGPAARSVKLDL
FT                   QPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYNTDELARIVTRSASLLNADITADGAHE
FT                   VARRSRGTPRIANRLLRRVRDYAQVKAHGVIDQDAAGRALAMLDVDPQGLDVMDRKLLE
FT                   AIVHKFDGGPVGVDSLAAAIGEERDTIEDVIEPYLIQHGYLQRTPRGRTATLTTWRHLG
FT                   LTPPAAASGGTGELFSK"
FT   misc_feature    77132..77671
FT                   /note="HMMPfam hit to PF00004, DE ATPase family associated
FT                   with various cellular activities (AAA), score 1.3e-32"
FT   misc_feature    77147..77170
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(78009..79829)
FT                   /transl_table=11
FT                   /locus_tag="BB4007"
FT                   /product="ATP-dependent DNA helicase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3422"
FT                   /db_xref="GOA:Q7WGB2"
FT                   /db_xref="HSSP:1OYY"
FT                   /db_xref="InterPro:IPR018982"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB2"
FT                   /protein_id="CAE34370.1"
FT                   /translation="MSDPRALGVLARVFGYESFRGDQQAIVEHVIGGGDALVLMPTGGG
FT                   KSLCYQVPALVREGTGIVVSPLIALMQDQVDALTELGVRAAFLNSTQDWRVAREVEQAF
FT                   LAGELDLLYVAPERLLTDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHE
FT                   RWPEVPRIALTATATAATRSEIAQRLALDEARHFVASFDRPNIRYRIVEKNEVRRQLLD
FT                   LIRSEHEGESGVVYGLSRARVEETADFLCANGVNALPYHAGLSPAVRAANQARFLREDG
FT                   IVMVATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDGLPASAWLAYGLQDVV
FT                   QQRRMIDESPGDDAYRRRLGQQLDAMLGLCETVECRRVRLLAYFGQTITACGNCDVCLE
FT                   PPQAWDGTVAAQKVLSAVYRLWKERGQRYGAGHIIDILRGKSTDRTRQHDHETLSVFGV
FT                   GADLSENAWRGVLRQLLAQGLLAVDHEGFGTLALTEGSRAVLKGEHQLMLRREAEKKPR
FT                   GSRAGARARPDPIDLPAEAKPVFESLRSWRGEVAKSNGVPAYVIFHDATLREIALARPE
FT                   SLDDLSHISGVGARKLQAYGEEILRCVQRP"
FT   misc_feature    complement(78015..78233)
FT                   /note="HMMPfam hit to PF00570, DE HRDC domain, score 3e-15"
FT   misc_feature    complement(78126..78212)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   misc_feature    complement(78855..79070)
FT                   /note="HMMPfam hit to PF00271, DE Helicase conserved
FT                   C-terminal domain, score 1.1e-23"
FT   misc_feature    complement(79197..79805)
FT                   /note="HMMPfam hit to PF00270, DE DEAD/DEAH box helicase,
FT                   score 3.1e-34"
FT   CDS             complement(79906..81357)
FT                   /transl_table=11
FT                   /locus_tag="BB4008"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3221"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB1"
FT                   /protein_id="CAE34371.1"
FT                   /translation="MPRSGIPTLVRVMLACEREHRGVSRVAVAAVLAGNMALAACAMPD
FT                   PPDISRAPAGLEAGPEPAAIDTTPPETAAPRPAGRAYARAADDVARYGISVLAPASSQP
FT                   VAPAPVLQERAIPEPCRMLPAETGADASVHAAAPALGHDPAVPLPPAGDGADAPASMPL
FT                   GCEDLFPDVPPAEPNYSFGLETDDLAGKRSVYLMTGVAQPRRPWFSSASAVPTVSYGDR
FT                   SWVYRPVTGPSLAMGNVVSKAPGWGSTAPIGGVQLSDRLSPGGLLPEGQLGYSSVFGRL
FT                   NNMDPAATSGAVDYGASAGSGMVRYGLTPSLTLEGQMQSAPSLTTRGVGTTYAAGELGT
FT                   FQVGATQSTFDAVNAWRYRFGYNVNLADDAVTLGVATEEVGAGFGDLASFQDGGFAHRQ
FT                   MRNTLSAGVPISGWGTLSGTYQASGMGVDSVTERRFGLQHSMLLAPSVKFAVGADRDVI
FT                   SGDYEMRANISMPVDAFMRGRWLGF"
FT   misc_feature    complement(81235..81267)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             81515..82216
FT                   /transl_table=11
FT                   /gene="ompR"
FT                   /gene_synonym="ompB"
FT                   /gene_synonym="kmt"
FT                   /locus_tag="BB4009"
FT                   /product="transcriptional regulatory protein OmpR"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3222"
FT                   /db_xref="GOA:Q7WGB0"
FT                   /db_xref="HSSP:1B00"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGB0"
FT                   /protein_id="CAE34372.1"
FT                   /translation="MDNPHTKLLVVDDDPALRQLLADYLNRHGYDTLLAPDASDLAARI
FT                   TRYAPDLLVLDRMLPGGDGADACRRLRDQGEDIPVILLTARDEAVDRIIGLEAGADDYL
FT                   GKPFDPRELLARIEAVLRRKRGPSALTKDAPVSFGPFVFDPATRQLLRDDTPVKLTGGE
FT                   INLLEALVRNAGKPLSRERLLALARDDDGGERNDRAIDIAILRLRRAIEEDPKQPRWIQ
FT                   TVWGIGYRFSP"
FT   misc_feature    81530..81889
FT                   /note="HMMPfam hit to PF00072, DE Response regulator
FT                   receiver domain, score 4.6e-40"
FT   misc_feature    81977..82198
FT                   /note="HMMPfam hit to PF00486, DE Transcriptional
FT                   regulatory protein, C terminal, score 3.5e-25"
FT   CDS             82216..83640
FT                   /transl_table=11
FT                   /locus_tag="BB4010"
FT                   /product="putative two-component sensor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3223"
FT                   /db_xref="GOA:Q7WGA9"
FT                   /db_xref="HSSP:1BXD"
FT                   /db_xref="InterPro:IPR003660"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA9"
FT                   /protein_id="CAE34373.1"
FT                   /translation="MKLLRLPAPRSLRMRLILLVLGSVLLAQAATLATVSYFRHKFMED
FT                   VAIDYIATTIRTLRASLSQVPTDERAEFVRQASGNQWRLWSRSLPADARLQRWHRGPQE
FT                   DEAERERMRREYERRHPPPDDIRRDLRGLVSELNERLSDGTRVALSRGPRPEIFISLAP
FT                   SPSPDDAPPLREWLVIPLERLDPPVATPLIAFWVGGIGLVLLLAAWFSWHITRPLTRLA
FT                   DAADQLAAGQPQRVEPSGPHETRVLGERFNAMLDALAESDSVRRTLLSGLPHDLKGPLS
FT                   RMWLRIEMADDPTLKEGLRKDLQDMQHMVDQFIGFVRGTDPAAYRYAPLALGEWLAERV
FT                   GAWQGAGTDIRLQAPDNGALGIQADAVALGRLLDNLIGNALHHGAPPVEVSLRRDADMA
FT                   VLEVSDHGPGIAPERRTEALRPFARLDDARTRTGNVGLGLALAEAIARAHGGGLELRQA
FT                   PSGGLLVRITLPLAKA"
FT   misc_feature    82216..82302
FT                   /note="Signal peptide predicted for BB4010 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.872 between residues 29 and 30"
FT   misc_feature    join(82258..82326,82789..82857)
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB4010 by TMHMM2.0 at aa 15-37 and 192-214"
FT   misc_feature    82789..82995
FT                   /note="HMMPfam hit to PF00672, DE HAMP domain, score
FT                   5.1e-13"
FT   misc_feature    83005..83181
FT                   /note="HMMPfam hit to PF00512, DE His Kinase A
FT                   (phosphoacceptor) domain, score 0.0048"
FT   misc_feature    83305..83631
FT                   /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA
FT                   gyrase B-, and HSP90-like ATPase, score 4.3e-31"
FT   CDS             complement(83657..84712)
FT                   /transl_table=11
FT                   /locus_tag="BB4011"
FT                   /product="putative cytochrome oxidase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3224"
FT                   /db_xref="GOA:Q7WGA8"
FT                   /db_xref="InterPro:IPR003317"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA8"
FT                   /protein_id="CAE34374.1"
FT                   /translation="MIATLAASLGLSPDDPSFWMPLVFVGLLLLLMAAGIVLDGFDIGV
FT                   GLLLQLAPSEERGRMMGLLSPWRDANEFWPLLGLGLFVSAFPFAWGVVLGKLFGPLTVM
FT                   ALGMVLRSVSFEFRIRARTEIKPRWIFGFWVGSLLTALGQGMVLGRIATDYQADAGYGW
FT                   FAFFVGLCAMAAYALLGACWLVMRVDGELQRRAAGWARHSIRWTAAGMVAIAVTLGLAN
FT                   AGIFYKWSNTAHLGVAAMVWALMLLGFVAAEMLLARLPGKADGFSWLPFVLCVMLFVLM
FT                   LCGLAYSFFPYLILDDMTIWDGSGALDSMRLVLAGTVIGVPVVLVFNILAYRSVFGKER
FT                   RPVPLLPPPGA"
FT   misc_feature    complement(83693..84655)
FT                   /note="HMMPfam hit to PF02322, DE Cytochrome oxidase
FT                   subunit II, score 2.2e-12"
FT   misc_feature    complement(join(83717..83785,83843..83911,83945..84004,
FT                   84032..84100,84158..84226,84254..84322,84383..84451,
FT                   84599..84667))
FT                   /note="8 probable transmembrane helices predicted for
FT                   BB4011 by TMHMM2.0 at aa 16-38, 88-110, 131-153, 163-185,
FT                   205-227, 237-256, 268-290 and 310-332"
FT   CDS             complement(84709..86100)
FT                   /transl_table=11
FT                   /locus_tag="BB4012"
FT                   /product="putative transmembrane cytochrome oxidase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3225"
FT                   /db_xref="GOA:Q7WGA7"
FT                   /db_xref="InterPro:IPR002585"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA7"
FT                   /protein_id="CAE34375.1"
FT                   /translation="MQAVPHMPETGSKLPPIMNIPPLLLARAQFTASLGFLALFLAISL
FT                   ALAWLLLFFKLRARWSGQSGWTAAYRFWVRIFALAFVLALACAVPVLIQLGSLWSGLMD
FT                   KIGNLAGPLLGYGVLSIFIVKSCFLGVMLFGQRRVSDAAHTLAVLMVAIGQLVAVGWVL
FT                   ALFSWLQTPDGAVLIDGRYQVYDWRAVVLNPSFGWRLGLTVLGAFLTAGFLMLGVTAMQ
FT                   ALRRPLDDGERHAFRAGLTVALLASLLLGPVAAGMGEVTARLQPAKAAAAAGFWHSGAE
FT                   PELVVFGWPSARAQANLAAVSLAGAGGRWLHRDASLGYLGLDKFSGMQPPVAFTFWSLR
FT                   LALGLGLLMLAASCATLALTCRRGFDPAALPRWWLRVLSLLMFAGALGVVATWCYDLAG
FT                   MQPYAVNRAVTQSEVLGPVTTPALLYSLAGHIALYAVLLAAFVGMLFHAARYGVVPVRK
FT                   TGGSS"
FT   misc_feature    complement(84724..86028)
FT                   /note="HMMPfam hit to PF01654, DE Bacterial Cytochrome
FT                   Ubiquinol Oxidase, score 1.5e-26"
FT   misc_feature    complement(join(84754..84822,84916..84984,85018..85086,
FT                   85321..85389,85447..85515,85594..85662,85696..85764,
FT                   85807..85875,85933..86001))
FT                   /note="9 probable transmembrane helices predicted for
FT                   BB4012 by TMHMM2.0 at aa 34-56, 76-98, 113-135, 147-169,
FT                   196-218, 238-260, 339-361, 373-395 and 427-449"
FT   CDS             86165..87928
FT                   /transl_table=11
FT                   /gene="glnS"
FT                   /locus_tag="BB4013"
FT                   /product="putative glutaminyl-tRNA synthetase"
FT                   /EC_number="6.1.1.18"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3226"
FT                   /db_xref="GOA:Q7WGA6"
FT                   /db_xref="HSSP:1GTR"
FT                   /db_xref="InterPro:IPR020056"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGA6"
FT                   /protein_id="CAE34376.1"
FT                   /translation="MTHAPTPPAASNFLRPIIEDDLQANRFQGKLWAGKPGPAALQAQG
FT                   QPDPARIRTRFPPEPNGYLHIGHAKSICVNFGLARDYGGVCHLRFDDTNPEKEEQEYVD
FT                   AIIEAVHWLGFDWQADGNDNLYFASDYFEFMYEFAEALVQAGHAYVDEQSAEEIRASRG
FT                   TLTEPGTDSPWRDRPADESLLRLREMRDGKHPDGSLVLRARIDMASPNINLRDPVMYRV
FT                   RHATHHRTGNAWCIYPMYSWAHPVEDALEGITHSICTLEFEDQRPFYDWILARLAELGK
FT                   LARPLPHQYEFARLNLTYVVTSKRKLLQLVREGYVDGWDDPRMPTLFGLRRRGYTPSSI
FT                   RLFCDRTAVSKSDSRIDYSLLEQAVRDDLDPVAPRSVAVLDPLKLVITNYPEGRSETCS
FT                   APRNPHDPQAGVREFPFTRELWIEQDDFREEPPKKYFRLFPGNTVRLKYGYVVRCTGFT
FT                   KDQSGKVVEVQAEYLPDTKSGTPGADSVKVKGNITWVSAAHAVPAQVHLYDRLFADAHP
FT                   DGGDKDFLACLNPHSKQTVQAWLEPGIEAVPGATWQFERLGYFTVDSKDSRPEAPVLNR
FT                   IVTLRDSWQAA"
FT   misc_feature    86315..87277
FT                   /note="HMMPfam hit to PF00749, DE tRNA synthetases class I
FT                   (E and Q), catalytic domain, score 2.8e-133"
FT   misc_feature    86336..86371
FT                   /note="PS00178 Aminoacyl-transfer RNA synthetases class-I
FT                   signature."
FT   misc_feature    87281..87853
FT                   /note="HMMPfam hit to PF03950, DE tRNA synthetases class I
FT                   (E and Q), anti-codon binding domain, score 9.1e-68"
FT   CDS             88040..88918
FT                   /transl_table=11
FT                   /gene="minC"
FT                   /locus_tag="BB4014"
FT                   /product="putative cell division inhibitor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3227"
FT                   /db_xref="GOA:Q7WGA5"
FT                   /db_xref="InterPro:IPR013033"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGA5"
FT                   /protein_id="CAE34377.1"
FT                   /translation="MNTESLALDFKSATLYAIRVVLHDADTTRLRAALDKRMADAGSFF
FT                   ENEPVVIDATRVDAPVDWPALLQALADHNLPPIGVVAEGANLQGARDAGLVPVELSTPV
FT                   ARAPQVIDTAPPNDVATPVPSVPEATAEAAAKAGPQDDEAYGEQADEAPAHNPESVPTR
FT                   AARETTEANRPTATPPQSSSALVITKPLRSGQRVYARHTDLIVIGMVSQGAEVIADGNV
FT                   HVYGPLRGKAMAGARGDTSARIFTTQLDAELLAVAGVYRVVEDKLDRALHNQPALVRLD
FT                   GDTLRIEALKG"
FT   misc_feature    88223..88909
FT                   /note="HMMPfam hit to PF03775, DE Septum formation
FT                   inhibitor MinC, score 3.7e-47"
FT   CDS             89031..89846
FT                   /transl_table=11
FT                   /gene="minD"
FT                   /locus_tag="BB4015"
FT                   /product="putative septum site-determining protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3228"
FT                   /db_xref="GOA:Q7WGA4"
FT                   /db_xref="HSSP:1G3Q"
FT                   /db_xref="InterPro:IPR002586"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA4"
FT                   /protein_id="CAE34378.1"
FT                   /translation="MTRIVVVTSGKGGVGKTTTSASFSAGLAMRGHKTAVIDFDVGLRN
FT                   LDLIMGCERRVVYDFVNVIQGEASLKQALIKDKQLENLFILPASQTRDKDALTQEGVEK
FT                   VIDELKEMGFDYIVCDSPAGIEAGALMAAYFADDALVVTNPEVSSVRDSDRILGILAAK
FT                   SRRAVQGDEPVKEYLLLTRYNPKRVNDGEMLSLSDIEDILRIKLIGVIPESEAVLQASN
FT                   QGLPAIHLKDTDVSEAYKDVVARFLGEERSLRFTDYEKPGLLKRLFGGK"
FT   misc_feature    89058..89081
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    89265..89609
FT                   /note="HMMPfam hit to PF00991, DE ParA family ATPase, score
FT                   8e-05"
FT   CDS             89850..90101
FT                   /transl_table=11
FT                   /gene="minE"
FT                   /locus_tag="BB4016"
FT                   /product="putative cell division topological specificity
FT                   factor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3229"
FT                   /db_xref="GOA:Q7WGA3"
FT                   /db_xref="HSSP:1EV0"
FT                   /db_xref="InterPro:IPR005527"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WGA3"
FT                   /protein_id="CAE34379.1"
FT                   /translation="MSFLSFLLGQKKSSASVAKERLQIILAHERGRGDSPDYLPQLQQE
FT                   LVAVISKYVKIDPEDIKVHLERQDTLEVLEVKIEMPQN"
FT   misc_feature    89856..90095
FT                   /note="HMMPfam hit to PF03776, DE Septum formation
FT                   topological specificity factor MinE, score 1.3e-34"
FT   CDS             complement(90272..90493)
FT                   /transl_table=11
FT                   /gene="osmB"
FT                   /locus_tag="BB4017"
FT                   /product="osmotically inducible lipoprotein B precursor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3231"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA2"
FT                   /protein_id="CAE34380.1"
FT                   /translation="MKIGTLSKACMAALLAVSLAGCSSWDSMSRRQKSTVGGAALGGVA
FT                   GAVITNGGILGTVGGAAIGGVIGDQVGK"
FT   misc_feature    complement(90320..90388)
FT                   /note="1 probable transmembrane helix predicted for BB4017
FT                   by TMHMM2.0 at aa 36-58"
FT   misc_feature    complement(90368..90493)
FT                   /note="Signal peptide predicted for BB4017 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.993) with cleavage site
FT                   probability 0.201 between residues 42 and 43"
FT   misc_feature    complement(90428..90460)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(90691..91230)
FT                   /transl_table=11
FT                   /locus_tag="BB4018"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3232"
FT                   /db_xref="GOA:Q7WGA1"
FT                   /db_xref="InterPro:IPR000868"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA1"
FT                   /protein_id="CAE34381.1"
FT                   /translation="MSALLQANQATLLIVDMQGRLMPAIHDGQAVLAAAHKLAQAARLL
FT                   DVPVVATEHHARMLGVTVAPLDTQIQARFPKMHFSATREPGFTAWLPPARKTILVAGCE
FT                   AHICVLQTVLGLLEEGYRALLVSDAAGSRKPADHHAALRRARGAGAEIVTTEMAIFEWM
FT                   ETCEHPKFRDVLRLVK"
FT   misc_feature    complement(90751..91218)
FT                   /note="HMMPfam hit to PF00857, DE Isochorismatase family,
FT                   score 9.5e-05"
FT   CDS             complement(91251..92924)
FT                   /transl_table=11
FT                   /locus_tag="BB4019"
FT                   /product="putative ABC transport ATP-binding subunit"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3233"
FT                   /db_xref="GOA:Q7WGA0"
FT                   /db_xref="HSSP:1US8"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WGA0"
FT                   /protein_id="CAE34382.1"
FT                   /translation="MAQYVYTMNRVGKIVPPKRQILRDISLSFFPGAKIGVLGLNGSGK
FT                   STLLKIMAGVDKEIEGEAIPMPGLNIGYLPQEPELNPEHTVRQSVEEGLGAVFNAKQRL
FT                   DEVYAAYAEPDADFDALAAEQAELEAVIAAAASSGADDIEHQMEIAADALRLPPWDAMV
FT                   GKLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVEWLEQFLHKFPGTVVAVTHDR
FT                   YFLDNAAEWILELDRGYGIPWKGNYSSWLEQKEDRLKQEEATESARQKTIKKELEWVRQ
FT                   NPKGRQAKAKARIARFEELSSYEYQKRNETQEIFIPVGDRLGNEVIEFNNVSKAYGDRL
FT                   LIDDLSFKVPAGAIVGIIGPNGAGKSTLFRMLAGREQPDSGEVKLGQTVKLAYVDQSRD
FT                   SLEGNKTVFDAVADGADLLTVGKFEMPSRAYLGRFNFKGGDQNKIVGQLSGGERGRLHL
FT                   AKTLIAGGNVLLLDEPSNDLDVETLRALEDALLEFPGSVMVISHDRWFLDRIATHILAF
FT                   EGDSQVVFFDGNYQEYEADKKHRLGEEGAKPKRLRYKALK"
FT   misc_feature    complement(91365..91871)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   3.1e-45"
FT   misc_feature    complement(91827..91850)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(92211..92831)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   3.1e-48"
FT   misc_feature    complement(92385..92429)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(92787..92810)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(93019..93936)
FT                   /transl_table=11
FT                   /locus_tag="BB4020"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3234"
FT                   /db_xref="GOA:Q7WG99"
FT                   /db_xref="InterPro:IPR000620"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG99"
FT                   /protein_id="CAE34383.1"
FT                   /translation="MRSIPSPPGAAQPQPRHMAFPLLATTIWSVNMVVTKMAADVIAPA
FT                   SIGFYRWVLAGLLLAPFALPGVLRQWPQIRPNLGRLAVLGGLGMALYQGLMYVAAGTTT
FT                   ATNMGIITAMVPLLTVVVGSLVLRERPALTAILGAVVSLAGLGILLGEGNPLRLLALGG
FT                   SRGDALMGLAALAYALYGVLLRKWPMSVGPWQSLFVQVLFGIVFQLPAFLLTPASPLNA
FT                   QNIPLVLYAGIFPSLFAPFLWMQGVRYLGPNRASIFLNLMPVVTVAIAAAFLGETPHLY
FT                   HIAGGLMALAGVSLAQWRPARRRA"
FT   misc_feature    complement(93043..93414)
FT                   /note="HMMPfam hit to PF00892, DE Integral membrane protein
FT                   DUF6, score 6.1e-24"
FT   misc_feature    complement(join(93049..93102,93115..93168,93205..93264,
FT                   93292..93351,93385..93441,93484..93543,93556..93624,
FT                   93637..93696,93733..93792,93820..93879))
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB4020 by TMHMM2.0 at aa 20-39, 49-68, 81-100, 105-127,
FT                   132-151, 166-184, 196-215, 225-244, 257-274 and 279-296"
FT   misc_feature    complement(93484..93861)
FT                   /note="HMMPfam hit to PF00892, DE Integral membrane protein
FT                   DUF6, score 5.9e-23"
FT   CDS             94049..94564
FT                   /transl_table=11
FT                   /locus_tag="BB4021"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3235"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG98"
FT                   /protein_id="CAE34384.1"
FT                   /translation="MSASAQPPASLTHFSPAELDMLAKTADALSAYLGKPVLAEVALGD
FT                   EGTEWVTFGVALDTDADETDDAAPHVQMGGAGARLLGGRGGLPDSDTESYDCLYLWAVQ
FT                   ISLVEGERFIKLDQDGDECAWSDQLTDVLPFALSEDELPPDDDEDDEDDEDGADDDGPG
FT                   HNGDTHRH"
FT   CDS             94685..96166
FT                   /transl_table=11
FT                   /locus_tag="BB4022"
FT                   /product="probable hydrolase"
FT                   /db_xref="GOA:Q7WG97"
FT                   /db_xref="InterPro:IPR000120"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG97"
FT                   /protein_id="CAE34385.1"
FT                   /translation="MTSTPPPAFPAGAKRPDLASLTAYEAARELAAGEIGSEALTAAYL
FT                   ARIAAHPELNAFITVDADGALAQARAWDAARAAGAAAQPLGGVPIAIKDNIHVAGLPNT
FT                   AGTPALRGFVPRAHAPVVQRLVQAGAVILGKTNMHELAYGVSGYNTAFHGERTVGVRNA
FT                   YDTARIAGGSSAGSGAAVGARLAPAALGTDTGASIRLPAALNGGVGLRPTVGRYDAAGI
FT                   TPISHTRDTPGPMANSVTDVMLLDAVISGEPAPAPIPATRIRLGLPAWFWTGLDPAIAA
FT                   VARAALDKLRAAGVDLIELDIPGLKEQNQEISFVLALYEQKMDLIDYLRRYEAGPDFDG
FT                   VVAQIASPDVRAIFTDMIAPLRLPGPDGAGLDLEPLYREAIATGRPALIGIYRDAFARH
FT                   RIDALLFPTVPVGAPLAGPDASSLENFARLARNVDPGSNAGLPGLSLPAGLDAHGLPVG
FT                   LELDGLPGEDRKVLAIGLMLETILGRLAPPAIAAA"
FT   misc_feature    94799..96100
FT                   /note="HMMPfam hit to PF01425, DE Amidase, score 2.4e-114"
FT   misc_feature    95069..95092
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             96299..96796
FT                   /transl_table=11
FT                   /locus_tag="BB4023"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR009725"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG96"
FT                   /protein_id="CAE34386.1"
FT                   /translation="MARLTRIVPCLWFDHQAEEAARYYADIFDNSRVGAISRYDEAGKE
FT                   VHGRAPGSVMTVQFELDGTPFTALNGGPAFQFSPAISLQVSCATQEEIDHYWERLGAGG
FT                   DPRAQQCGWLADQYGLSWQIVPAMVAEWMTGDPAGAQRAMAALLGMKKLDIAALRRAYD
FT                   GA"
FT   CDS             complement(96809..97801)
FT                   /transl_table=11
FT                   /locus_tag="BB4024"
FT                   /product="putative ABC transport ATP-binding subunit"
FT                   /db_xref="GOA:Q7WG95"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG95"
FT                   /protein_id="CAE34387.1"
FT                   /translation="MNAPLVQVRDAARWFDVSAPWLERVLARKPRQMLRAVDGVSFEIA
FT                   RGETLALVGESGCGKSTVARMLVGLYGLTRGAIQFDGQPLSALATPQGKQLRSRLQMIF
FT                   QDPYASLNPRWRVGRIIAEPLLTHASLAPAQRQERVGELLRQVGLDPADQHRYPHQFSG
FT                   GQRQRISIARALAARPQFLVCDEPTSALDVSVQAQVLNLMKDLQRELGLTYLFISHNLA
FT                   VVHHVADRVGVMYLGKLVEVAPRDELFAQPRHPYTRMLLEAIPDLNGAGRPRTAVAGEV
FT                   PNPLNPPTGCAFHPRCPHANARCKSEAPRALGHGLAVVACHAVEEGRLA"
FT   misc_feature    complement(97091..97663)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   3.5e-58"
FT   misc_feature    complement(97277..97321)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(97619..97642)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(97798..98772)
FT                   /transl_table=11
FT                   /locus_tag="BB4025"
FT                   /product="putative ABC transport ATP-binding subunit"
FT                   /db_xref="GOA:Q7WG94"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG94"
FT                   /protein_id="CAE34388.1"
FT                   /translation="MSALLEVKNLSVEFPTRRGTLKALDDVSFTIAPGEVLGVVGESGA
FT                   GKSLTGAAIIGLLEPPGRISAGQILLAGRRIDNLREDQMRRVRGREIGAVFQDPLTSLN
FT                   PLYTVGRQLAETIVTHLPLSWSQARERAIELLAATGIPAARERIDHFPHQFSGGMRQRV
FT                   VIALALAAEPRLVVADEPTTALDVSIQAQIIELLKKLCREQGASVMLITHDMGVIAETA
FT                   DRVAVMYAGRLAEIGPVGDVIHRPRHPYTEGLMGSIPALDSHAERLVQIDGSMPRLNAI
FT                   PPGCAFNPRCKVRLPRCGSERPELMPAGASRAACWLHDAREAA"
FT   misc_feature    complement(98080..98673)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   2e-55"
FT   misc_feature    complement(98266..98310)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(98629..98652)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(98780..99694)
FT                   /transl_table=11
FT                   /locus_tag="BB4026"
FT                   /product="putative binding-protein-dependent permease"
FT                   /db_xref="GOA:Q7WG93"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG93"
FT                   /protein_id="CAE34389.1"
FT                   /translation="MRAVLKRWWDSDLAWSWRHSPVAMVATLVLALLLVSAFGARWVAP
FT                   HNPFDLTTVELLDALLPPAWSDNGQPQYLLGTDSQGRDLYSAILYGTRVSLLIGLASVA
FT                   LSMLIGVVLGLVSGYAGGRLDALIMRVADVQLSFPAILIALLIDGVARAAVPRELHEVI
FT                   AFPVLIGAIALAGWPQYARTVRGSTLVEKNREYVQAARVIGVAPPVIMFRHVLPNVMGP
FT                   VLVLATVHLATAIITEATLSFLGVGVPPTAPSLGTLIRIGNDFLFSGEWWITIFPGAAL
FT                   VLLVLSVNLVGDWLRDALNPRLN"
FT   misc_feature    complement(join(98819..98887,98984..99052,99143..99211,
FT                   99254..99319,99338..99406,99566..99634))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB4026 by TMHMM2.0 at aa 21-43, 97-119, 126-147, 162-184,
FT                   215-237 and 270-292"
FT   misc_feature    complement(98894..99133)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.0056"
FT   misc_feature    complement(99044..99130)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   misc_feature    complement(99578..99694)
FT                   /note="Signal peptide predicted for BB4026 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.890) with cleavage site
FT                   probability 0.638 between residues 39 and 40"
FT   CDS             complement(99694..100680)
FT                   /transl_table=11
FT                   /locus_tag="BB4027"
FT                   /product="putative binding-protein-dependent permease"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3236"
FT                   /db_xref="GOA:Q7WG92"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG92"
FT                   /protein_id="CAE34390.1"
FT                   /translation="MLAFILRRILQAAAVMLTVALLAFVLFQYVGDPVTIMLGQDATDA
FT                   ERVELRERLGLDDAPPVQFARFVGNALQGDFGISLRQSEKVSSLIQARLPATLELSLVA
FT                   AVLALVVGLPLGVYTALRRHGLLAQLVLAGSLLGVSLPTFLIGILLILVFSVQLGWLPS
FT                   YGRGDTVSFGWWTSGLFTATGWKHLILPSITLSLFQMTLVLRLVRSEMLEVLRSDYIKF
FT                   ARARGLRQRAIHFGHALKNTMVPVITITGLQLGGIIAFAIVTETVFQWPGMGLLFIQAV
FT                   QFADVPVMAAYLCLIALVFVVINLIVDLLYFVVDPRLRSGLSRNGGH"
FT   misc_feature    complement(join(99751..99819,99877..99945,100060..100119,
FT                   100222..100290,100327..100395,100588..100656))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB4027 by TMHMM2.0 at aa 9-31, 96-118, 131-153, 188-207,
FT                   246-268 and 288-310"
FT   misc_feature    complement(99835..100050)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.0023"
FT   misc_feature    complement(100597..100680)
FT                   /note="Signal peptide predicted for BB4027 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.986) with cleavage site
FT                   probability 0.397 between residues 28 and 29"
FT   CDS             complement(100760..102331)
FT                   /transl_table=11
FT                   /locus_tag="BB4028"
FT                   /product="putative binding-protein-dependent transport
FT                   protein (periplasmic)"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3237"
FT                   /db_xref="GOA:Q7WG91"
FT                   /db_xref="HSSP:1B52"
FT                   /db_xref="InterPro:IPR000914"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG91"
FT                   /protein_id="CAE34391.1"
FT                   /translation="MRRTMIAIAIAAACALPSIGQAKTFRWASQGDILTFDPHSQNEGM
FT                   TIAANSYVYEPLVAYDKDFKVVPALATEWTQVSPTLYRFKLREGVKFHDGAPFTAEDAV
FT                   FSIHRAMAPTSNYKAYTTGIKEARKIDDYTIEIETSAPNPVLLRQLPNVFIMNKAWSEK
FT                   HNVAKPQDFVNKEETFAARNTNGTGAYKLKSREVDVRTVFVENTEWWNKDRKIGNVTEV
FT                   VFTPIKQNATRTAALLSGEIDFVLDPAAQDLERLRQQAKVVEGNEYRTIYIGFDQKRPE
FT                   LLYSSVKGKNPFADVRVREALYRAIDVEAIKRAVMRGLSAPTGTMIAPQVHGWTEALHK
FT                   RVPYDPEKARALLKEAGYDGTLSFTLDCPNNRYINDEAICQAVVGMWAKVGVKASLNAM
FT                   PRATYFPKVQSRDTSAFLFGWGVPTFDAMYTLQNLVRTKGEGADGMYNLGDYSNKEADA
FT                   IIDRIKTETDPAKRDADIVRALEIHAQEFGHIPLHDQVIPWAMRKNVTVIHRADNRLSA
FT                   DWVRID"
FT   misc_feature    complement(100766..102328)
FT                   /note="HMMPfam hit to PF00496, DE Bacterial extracellular
FT                   solute-binding proteins, family 5, score 3.7e-51"
FT   misc_feature    complement(102266..102331)
FT                   /note="Signal peptide predicted for BB4028 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.836 between residues 22 and 23"
FT   misc_feature    complement(102290..102322)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(102450..103385)
FT                   /transl_table=11
FT                   /locus_tag="BB4029"
FT                   /product="putative glycosyl transferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3238"
FT                   /db_xref="GOA:Q7WG90"
FT                   /db_xref="InterPro:IPR001173"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG90"
FT                   /protein_id="CAE34392.1"
FT                   /translation="MIDSQFQFTVLTPTYNRAVTLHRVFQSLQRQTCRDFEWVVVDDGS
FT                   TDNTHEVVRAWQAQADFPIRYVWQHNQHKKTAFNRGVREARGMLVVGLDSDDEIPPDAL
FT                   AILKDAWEGIPADRRETYVAVTGLCARPDGSIVGDRFPQDVFDSTAVDMYFRYRVQGEK
FT                   FGAMRADVLRRFPFPEDVAGFVPESLVWWAISRAGYLSRFINRVVRVYHDTPGGLSQGG
FT                   VSLSSNIQGLYLLAWDMLQHHLDWFRYRPREFIMAAARYTRFRLHLDNSGLPTAVQAYR
FT                   LTQPSARLLVLLMWPLGYLLYRRDRRRGVA"
FT   misc_feature    complement(102861..103361)
FT                   /note="HMMPfam hit to PF00535, DE Glycosyl transferase,
FT                   score 1.1e-28"
FT   CDS             103574..104518
FT                   /transl_table=11
FT                   /locus_tag="BB4030"
FT                   /product="putative LysR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3239"
FT                   /db_xref="GOA:Q7WG89"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG89"
FT                   /protein_id="CAE34393.1"
FT                   /translation="MQAQTVQLNDIALFVEVAKRKSFSLAARALDMPTSTLSRRINQLE
FT                   KAIGLRLINRNTRRLELTDAGTVYLLRCQGLIDETRLAREQLESLTGRPKGRLNISMPY
FT                   SLAIWLLPTSLGAFLDSYPEIDCEFDLNLNASATSQGAPFDVILRFGRDSGDDETPDPN
FT                   TVVDEIISLDSYLYASEDYLARYGEPRDPADLGRHECLRTAIDPEHSHWTLHNGERTER
FT                   VEVSGHVAGNNISVVGTLAGLGLGITRLPHCQALDPVIERNSLRRVLPQWRVQPISIYA
FT                   VYPSPILPGRTRVFMDFVRPMLGPAPTGPQPRA"
FT   misc_feature    103595..103774
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 3.5e-18"
FT   misc_feature    103637..103729
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   misc_feature    103844..104485
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 1.7e-28"
FT   CDS             complement(104587..104802)
FT                   /transl_table=11
FT                   /locus_tag="BB4031"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3239A"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG88"
FT                   /protein_id="CAE34394.1"
FT                   /translation="MPSYSDFRRRLFAPAMAGAGAAATPLEIIMAERKRVRRNTLERRC
FT                   LGKAFKRLFVKSPKGVFKMLEKIKRV"
FT   misc_feature    complement(104737..104802)
FT                   /note="Signal peptide predicted for BB4031 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.942) with cleavage site
FT                   probability 0.496 between residues 22 and 23"
FT   CDS             105086..110803
FT                   /transl_table=11
FT                   /gene="uvrA2"
FT                   /locus_tag="BB4032"
FT                   /product="putative excinuclease ABC subunit"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3240"
FT                   /db_xref="GOA:Q7WG87"
FT                   /db_xref="HSSP:1F2U"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG87"
FT                   /protein_id="CAE34395.1"
FT                   /translation="MSSQIRIVGARQNNLKNLDLTIATGELVVVTGVSGSGKSSLAFDT
FT                   LYAEGQRRYVETFSPYARQFLDRMDKPQVDRIEGILPAIAIDQTNPVRSSRSTVGTMTE
FT                   LNDHLKLLFARGARLYCRGCGKQVRRDTPESVFHSLAGRAAALGDPRLVVTFPIAVPAN
FT                   FTEDEVRGFLDQQGYTRVHAEEAASAAAPAPKARRGKSAKGAKDGAAPVARRILHVVQD
FT                   RFRFAAAERERVMEALDTALRMGAGHLAVYAMGEEGGADQAVWKYSDRLHCADCDIEYT
FT                   DPLPSSFSFNSPLGACEACRGFGRVIGIDIGLVIPDENKTLLEGAIKPWQTPSFKECQD
FT                   DMVKYAPRAGIPLSVPWKSMTPEQRGWVLHGDPDWKGGNQAWKTQWYGVHKFFAWLESK
FT                   AYKMHVRVLLSKYRSYTPCPTCHGARLKPDALLWRLGSRAEADAVLPPGEGRYQRFMPA
FT                   GTSWSRPQLEALDGLSVHDVMQLPIERVRRFFDGLRFEGVLDAAADLLMTEVRARLKFL
FT                   CDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMHRVVE
FT                   VMHRLRDAGNTLVVVEHDPQVMVAADRIIDIGPGPGERGGRIVFDGSPAQLRAANTLTG
FT                   DYLGGRQRVEAPRPMPVANNTPRLILEGATAHNLNNVSIELPLGRLVCVTGVSGSGKST
FT                   LVQDVLYPALLKQKGKPSEAPGAFDRLLGAEQIADVVMVDQTPIGKTARSNPASYVGAF
FT                   DAIRKLYAQAALSKERGYTAGTFSFNSGDGRCPTCGGTGFEHVEMQFLSDVYLRCPDCD
FT                   GKRFRPEVLEVRVEHLGKSASIDQVLEMTVSEALEFFKGLRDVQTGLAPLADVGLEYVR
FT                   LGQPVPTLSGGEAQRLKLAGHLAEAARSGISTAKVAKKGSLFLFDEPTTGLHFDDVARL
FT                   MRAFRKLLAAGHTLLVIEHNLDVIRAADWLIDLGPEGGDAGGEVVGVGTPQDLMANDRS
FT                   HTGLALRDYEGSILPVAPVSALAEPAAAYGEEAGTPLQSLMRRRRQAAQSIEIRNAREH
FT                   NLKNVNVEIPRDKFTVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARAIVQPAGKP
FT                   DVDAIFGIPPTVAIEQRTSRGGRKSTVATMTEIHHFLRLLYVKLGTQYCPDCKVAVEPQ
FT                   NADQIVARLLREHKGQHIGVLAPLVTARKGYYTDLAKWAGSKGHTHLRVDGAFIPVSPW
FT                   PRLDRYKEHTIELPVADVVVDPGNEAALRDAVRQALEHGQGVLSVVYPLDRLRAGLDGD
FT                   LQQQHFSVKRACPSCGVSFPEPDPRLFSYNSKHGWCGGCFGTGLQLQGFDAEQTGEETA
FT                   WNAWYEGEARTCTVCHGQRLNRVALAVRWRDRSIAELAALPVSDAHTFFTGLVTRGREG
FT                   EIARDILAEIRGRLNFMQEVGLSYLALDRAAPTLSGGEAQRIRLAAQLGSNLQGVCYVL
FT                   DEPTIGLHPRDNRILLDALARLEGNGNTLVVVEHDDDTIRRASHIIDIGPGAGIRGGRV
FT                   VAQGSAQDLIDAPESVTGRYLAKPLAHPLNGRRAVTADTPMIRVHGARLHNLRSVDASI
FT                   PIGRLSVVTGVSGSGKSTLAREVLLDNLVQAVSQGKAPGWSGCERITGWEVIDRVLEVD
FT                   QTPIGKTPRSCPATYVGFWDDVRKQFADTREARMRGWTAARFSFNTGDGRCPICEGQGM
FT                   RTIEMSFLPDVKVPCDACNGARFSSDTLSVQMRGKNAGELLAMEVDDAIGYFAAHPKIH
FT                   RPLQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKARLTEGVITTGRASRAPHTL
FT                   YVLDEPTVGLSMADVEKLIHVLHRLVEAGNTVVVIEHNLDVIAEADWLLDLGPEGGSGG
FT                   GQLVAEGSPEHVVSLRERSHTGRVLSEFLQQ"
FT   misc_feature    105179..105202
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    106412..106915
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   2.4e-06"
FT   misc_feature    107120..107977
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   4.5e-24"
FT   misc_feature    107141..107164
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    108263..109621
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   4.9e-07"
FT   misc_feature    108284..108307
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    109148..109165
FT                   /note="PS00190 Cytochrome c family heme-binding site
FT                   signature."
FT   misc_feature    109391..109435
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    109829..110686
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   1.3e-15"
FT   misc_feature    109850..109873
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    110420..110464
FT                   /note="PS00211 ABC transporters family signature."
FT   CDS             110809..111936
FT                   /transl_table=11
FT                   /locus_tag="BB4033"
FT                   /product="putative chorismate-binding enzyme"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3241"
FT                   /db_xref="GOA:Q7WG86"
FT                   /db_xref="HSSP:1K0G"
FT                   /db_xref="InterPro:IPR019999"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG86"
FT                   /protein_id="CAE34396.1"
FT                   /translation="MECRFEDRLAGRALRLAGDPIRIEARSADAVAPALREIERARAGG
FT                   RWIALLLDYELGEWLLPEALRAPASGAAPAPREDGRARLTALAFERAEVEAPWPAPATP
FT                   AARIVSVAPRMARDDYLRAVDAIRELIAAGELYQVNYTQPLDVRIEGDPRLLYRQIAAR
FT                   HPVGNGAYIEDGERTILSFSPELFVARQGERLVTRPMKGTAPRHADPAEDARLGRELLA
FT                   SDKNRAENLMIVDLLRNDLGRLATPGSVKVDALFSLERYPTVWTMTSTVSAHAPHAGLA
FT                   DVLRALFPCGSITGAPKIAAMRRIRQMEAAPRGLYCGSIGWLAPDGDFSLNVAIRTLVL
FT                   DRAGHGVYGVGGGIVHDSDAAQEWQECHWKARILG"
FT   misc_feature    111154..111930
FT                   /note="HMMPfam hit to PF00425, DE chorismate binding
FT                   enzyme, score 9.6e-85"
FT   CDS             111992..112618
FT                   /transl_table=11
FT                   /locus_tag="BB4034"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3242"
FT                   /db_xref="GOA:Q7WG85"
FT                   /db_xref="InterPro:IPR001544"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG85"
FT                   /protein_id="CAE34397.1"
FT                   /translation="MQPELIETILVTADRQLPLLGRHLARLLTSCQALRYRCNEPAVES
FT                   AIMAAVRGLHAPGPHRLRLLLARDGSHDIQTAPLAPLPPDQEVMLAPEALNADEPLLRY
FT                   KTTYRPWYAHTIEWLPSHPRVFDLLYLNQHGELCEGSRSNVYLELGGRWYTPPIASGCL
FT                   PGVQRAELIDQGKVQERTLTMSDLRSAESIRLSNALRGWIEVQYH"
FT   CDS             complement(112868..113578)
FT                   /transl_table=11
FT                   /locus_tag="BB4035"
FT                   /product="putative oxidoreductase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3244"
FT                   /db_xref="GOA:Q7WG84"
FT                   /db_xref="HSSP:1Q7B"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG84"
FT                   /protein_id="CAE34398.1"
FT                   /translation="MSRPVVLVTGASRGIGRAIAQRLLADGYDVVNFSRGKPADVLPGE
FT                   RFVPVDLSDTEAARRAATELAAQREVLHLVNNAGLIEVAGIDQVAPDAMQRTLALNLVA
FT                   PLVLLQALLPGMRARGYGRVVNIGSRAALGKPGRSAYGASKAGLAGMSRTWALELAPAG
FT                   ITVNVVAPGPIATELFNQSNPPGDPRTRQLEAAIPVGRVGRPDEVAHAVASLLDPRAGF
FT                   ITGQVLYVCGGMTV"
FT   misc_feature    complement(112877..113575)
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 2.2e-56"
FT   CDS             complement(113575..114579)
FT                   /transl_table=11
FT                   /locus_tag="BB4036"
FT                   /product="putative conserved membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3245"
FT                   /db_xref="GOA:Q7WG83"
FT                   /db_xref="InterPro:IPR000209"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG83"
FT                   /protein_id="CAE34399.1"
FT                   /translation="MKRTPGQWRACRAAVRALIAACMATLAAQAGAAGYPEHPVTVVVP
FT                   YPPGGAADIFGRAIAHAMQPHLKQTVLVENRPGAGGNVGMTYVTRSKPDGYTLGLGTIG
FT                   TQSINQFLYADMPYDPGRDLVPVALVSTTPNVLAVSARSPYRTLADVIEAARQRKDNKL
FT                   TYASPGVGSSVHLTGAYFEAVAGISLLHVPFKGTSASLPAVAGGQVDLLFDNLPGALAQ
FT                   IKDGSLVRGIAITSAQRDPSVPDLPTFAEAGVAGFDVTAWFALYAPRGTPQPVVEQLVA
FT                   AARQGLQAPELARQFGAMGARPGDKFGAQLGQFEQAERQKWGELIKQRGIRAQ"
FT   misc_feature    complement(113587..114417)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 9.2e-98"
FT   misc_feature    complement(113962..113994)
FT                   /note="PS00138 Serine proteases, subtilase family, serine
FT                   active site."
FT   misc_feature    complement(114484..114579)
FT                   /note="Signal peptide predicted for BB4036 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.488 between residues 32 and 33"
FT   CDS             114711..116306
FT                   /transl_table=11
FT                   /locus_tag="BB4037"
FT                   /product="putative fatty acid CoA ligase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3246"
FT                   /db_xref="GOA:Q7WG82"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG82"
FT                   /protein_id="CAE34400.1"
FT                   /translation="MPAAELFATRLDTHARERPEAVALIDRDRPVTHAALRAGVLDLAG
FT                   GLAALGVCRGERVALWLPNCAHWVTMFLACARLGALTLAVNTRFRAQELGDILGRGQAD
FT                   WLVYWPGFKGIDFAGILAAVPPAARARLRGAIVVDGSGAQATPGPAGLAAHALAALHGP
FT                   APLPAPNAGVLCFTTSGTTSLPKFVLHDQDTLLRHGDAIARSYGYDDDSRILASAPFCG
FT                   AFGFATLVGALARGVPVICEPAFDAARSVAAVRRHRVTHTYANNEALVQMFRLGERADF
FT                   ATARLFGFASFAPALGDLLPLARAQGVPLTGLYGSSELIALVAAQPREPADGDVSVRYE
FT                   PGGALIHPEARVRARDPQDGRILADGESGEIEILAPSLMRGYLDNPQASAGALTDDGYF
FT                   RTGDLGYTLGTRQFVFQTRMGDSLRLSGFLVNPAEIEQAVEALPGIRACQVVGATRDGK
FT                   TVPYAFVLLDAGASPDPPGWMAACRQGMAGFKVPAGFQVLEAFPVVESANSAKIQKHKL
FT                   REQAEALLAAAPAA"
FT   misc_feature    114804..116060
FT                   /note="HMMPfam hit to PF00501, DE AMP-binding enzyme, score
FT                   2.5e-64"
FT   misc_feature    115035..115082
FT                   /note="PS00225 Crystallins beta and gamma 'Greek key' motif
FT                   signature."
FT   misc_feature    116064..116087
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             116309..117046
FT                   /transl_table=11
FT                   /locus_tag="BB4038"
FT                   /product="putative transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3247"
FT                   /db_xref="GOA:Q7WG81"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG81"
FT                   /protein_id="CAE34401.1"
FT                   /translation="MSAARLFARSPQPLYLQAAAVFRGHIQTGVWRPGRQIPPLDALAA
FT                   RYGIARSTVRQALGLLEADGLIRRSRGSGTFVEDTLPETPTLLIPKNWAETVALSRELG
FT                   TVALHESSAQQPLPDDLGIPCDFARDGRFQYLRRLHTAAAGPFCFSEVYLESALFRKHR
FT                   AEIRASTVAPVLDRHYRARLSHARQVLNVIEAGAASAQALRIPVSAPVAELRRYVCIDA
FT                   RVVYFARLEFPFHKVRMEFDLLP"
FT   misc_feature    116360..116539
FT                   /note="HMMPfam hit to PF00392, DE Bacterial regulatory
FT                   proteins, gntR family, score 3.1e-16"
FT   CDS             complement(117202..118074)
FT                   /transl_table=11
FT                   /locus_tag="BB4039"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3248"
FT                   /db_xref="GOA:Q7WG80"
FT                   /db_xref="HSSP:1JW9"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG80"
FT                   /protein_id="CAE34402.1"
FT                   /translation="MAPMNSQPSVIAPACEADAERRFGGLARLYGPDAPAALRGAHVAV
FT                   AGLGGVGSWTAEALARCGVGALTLIDLDHIAESNVNRQIHALSDTLGQAKIEAMAQRIG
FT                   QINPACAVTRVDEFVAPDNVMQVLGGPYAAIVDCTDQAAAKIAMILHARQRGVPLLLCG
FT                   GAGGKTDPLALRAGDLSEAVNDALLAKLRNKLRREHGFPRASDANGKVRKRVPRMGVRA
FT                   LWFDQPAILPDAWTRAVEGEDDMGAAGTRAAPQGLSCAGYGSVVTVTAAMGLAAANEVL
FT                   RWVVGKSGA"
FT   misc_feature    complement(117547..117960)
FT                   /note="HMMPfam hit to PF00899, DE ThiF family, score
FT                   1.9e-34"
FT   CDS             118343..119563
FT                   /transl_table=11
FT                   /locus_tag="BB4040"
FT                   /product="putative inner membrane efflux protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3249"
FT                   /db_xref="GOA:Q7WG79"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG79"
FT                   /protein_id="CAE34403.1"
FT                   /translation="MSTSDPTPSRPTHGPELSGAGYLCLLAMLNHMALTGGRITVSLTA
FT                   LKLGLSTFTVGMLVAVFAVLPMFASVHAGRWVDKIGVVRPLVIGSSLVTFGTALPFVSQ
FT                   TQAALLVASCCIGIGFMLHQVATQDLLGHAEPRERLRNFSWMSLALAASGFSGPLIAGL
FT                   AIDHLGTRLAFGMLALGPMLSLVGLYLLRQPLRTMNGALTGGSNRPAERRRITELLAVP
FT                   PLRRILMVNTILSGAWDTHLFVVPIFGVAIGLSATTIGVILAAFAAATFVIRLVLPFIQ
FT                   TRVRSWTLVRAAMATAAIDFLLYPFFTDVGMLIGLSFVLGLALGCCQPSMLSLLHQYSP
FT                   PGRAAEAVGLRMALINASQVSLPLTFGALGAVIGVAPLFWAYALALVAGGWANRNPPQE
FT                   SDSSKSS"
FT   misc_feature    join(118397..118465,118484..118552,118580..118648,
FT                   118667..118726,118769..118837,118856..118915,
FT                   119114..119182,119243..119311,119426..119494)
FT                   /note="9 probable transmembrane helices predicted for
FT                   BB4040 by TMHMM2.0 at aa 19-41, 48-70, 80-102, 109-128,
FT                   143-165, 172-191, 258-280, 301-323 and 362-384"
FT   misc_feature    118652..118684
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    119288..119320
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             119560..120219
FT                   /transl_table=11
FT                   /locus_tag="BB4041"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3250"
FT                   /db_xref="InterPro:IPR006840"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG78"
FT                   /protein_id="CAE34404.1"
FT                   /translation="MNTQSPPSPHDPHGAAALPFRLWTAEERRASLDTALREWRDGEDV
FT                   WVYGYGSLIWRPDFDFVERRLATLHGHHRALCLWSRVNRGTPECPGLVFGLDRGGSCRG
FT                   VVYRLAGRQVPDYFPALWDREMSTGAYLPRWLRCATEHGPVNALVFIMNRANPAYIRAL
FT                   PEPELLAIVRRASGRYGPCTEYVVQTAQALRQAGIRDARLEQIARQLEADVHPLGV"
FT   CDS             120291..120923
FT                   /transl_table=11
FT                   /gene="pdxH"
FT                   /locus_tag="BB4042"
FT                   /product="pyridoxamine 5'-phosphate oxidase"
FT                   /EC_number="1.4.3.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3251"
FT                   /db_xref="GOA:Q7WG77"
FT                   /db_xref="HSSP:1NRG"
FT                   /db_xref="InterPro:IPR000659"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG77"
FT                   /protein_id="CAE34405.1"
FT                   /translation="MSVSDLRQSYEKGVLVEEQAAASPFQQFARWFDEAVAARVPEPNA
FT                   MTLATVNAEGQPSARIVLIKGYDDAGFVFFTNYESRKGLDLDANPRASLLFFWQPLERQ
FT                   VRIEGVIEKVSAAESDEYFHSRPLGSRLGAWASRQSQPITRDELEAREREFRDRYGEHP
FT                   PRPPHWGGYRLKPNRFEFWQGRPSRLHDRLRYEPDGKQGWTIDRLSP"
FT   misc_feature    120294..120917
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF01243, DE Pyridoxamine 5'-phosphate
FT                   oxidase, score 2.8e-100"
FT   misc_feature    120825..120866
FT                   /note="PS01064 Pyridoxamine 5'-phosphate oxidase
FT                   signature."
FT   CDS             120953..121471
FT                   /transl_table=11
FT                   /locus_tag="BB4043"
FT                   /product="putative monooxygenase component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3252"
FT                   /db_xref="GOA:Q7WG76"
FT                   /db_xref="InterPro:IPR012349"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG76"
FT                   /protein_id="CAE34406.1"
FT                   /translation="MSAAFPPAFDAAFFRTALGRFATGVTVVTTAGPDGQPVGLTVSSF
FT                   NSVSLNPPLILWSLARTSSSLAAFERCQRYVVNVLSASQIALARRFATGKTPERFAGLT
FT                   LAQAPAGTPMLGEGCAAWFECRNRSRYEEGDHIIMVGQVEHCGHSGVPPLVFHAGGFDL
FT                   TPPHGGASS"
FT   misc_feature    121004..121447
FT                   /note="HMMPfam hit to PF01613, DE Flavin reductase like
FT                   domain, score 6.1e-48"
FT   CDS             121482..122591
FT                   /transl_table=11
FT                   /locus_tag="BB4044"
FT                   /product="putative conserved exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3253"
FT                   /db_xref="GOA:Q7WG75"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG75"
FT                   /protein_id="CAE34407.1"
FT                   /translation="MSTDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSS
FT                   RNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARGVPHQRLGKLIVATSDAEASQLD
FT                   SIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAEND
FT                   GAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRD
FT                   SIPPEYLCKGSYFTLAGRAPFSRLIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWIATED
FT                   YTLDPRRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHEPAADFAISGPASHGVA
FT                   GLVNLYGIESPGLTASLAIAEETLARLAA"
FT   misc_feature    121482..121553
FT                   /note="Signal peptide predicted for BB4044 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.813) with cleavage site
FT                   probability 0.780 between residues 24 and 25"
FT   misc_feature    121494..122573
FT                   /note="HMMPfam hit to PF01266, DE FAD dependent
FT                   oxidoreductase, score 0.0027"
FT   CDS             122638..123492
FT                   /transl_table=11
FT                   /locus_tag="BB4045"
FT                   /product="putative formyltetrahydrofolate deformylase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3254"
FT                   /db_xref="GOA:Q7WG74"
FT                   /db_xref="HSSP:1GRC"
FT                   /db_xref="InterPro:IPR004810"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG74"
FT                   /protein_id="CAE34408.1"
FT                   /translation="MQHNDYILTLSCPDRTGIVFRVSGLLFELGCNIRDSQQFGDEETG
FT                   RFFLRVHFDLPRAAAESALREQFAALANGYDMQWQIHDAHRKARLLIMVSKQGHCLNDL
FT                   LFRVSSGQLRAEVAAIVSNHNDYASLAASYGIPFHHMPVTPDTKAAQERQVLELVEREQ
FT                   IDLVVLARYMQILSADMCQALAGRAINIHHSFLPSFKGARPYHQAHARGVKIIGATAHY
FT                   VTSDLDEGPIIEQDIERVDHTMTAADLTQVGSDIESLVLSRAVRSHVEHRILLNRSKTV
FT                   VFR"
FT   misc_feature    122653..122865
FT                   /note="HMMPfam hit to PF01842, DE ACT domain, score 7e-09"
FT   misc_feature    122899..123432
FT                   /note="HMMPfam hit to PF00551, DE Formyl transferase, score
FT                   1.3e-40"
FT   CDS             complement(123494..124396)
FT                   /transl_table=11
FT                   /locus_tag="BB4046"
FT                   /product="putative LysR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3255"
FT                   /db_xref="GOA:Q7WG73"
FT                   /db_xref="HSSP:1IXC"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG73"
FT                   /protein_id="CAE34409.1"
FT                   /translation="MDLEPRLLRYFIAVAQERNFSRAAQRLHISQPPLSYAIRQLETQL
FT                   GARLFERSSRHVALTDAGRVLYGEALSLLRQGEEVGRLVRRAEAGLQGRLRIGFVGSML
FT                   YRGLPDLLAALRAELPDVEQVLAERNSHDQLEALRRGELDLGFIHANPPPEGVSARDLV
FT                   AEPFVVCLPDTHRLAGQRSLRLADLAGEDFVFFAQAASPSYYETVLSLCVAAGFHPAVR
FT                   HEVRHWLSVAALVASGLGVSIVPACLARAGLAGTCYVAFEHQARSVCQIAWPSLAPTSL
FT                   QATALQAALRHFAPPPVRA"
FT   misc_feature    complement(123512..124135)
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 1.5e-45"
FT   misc_feature    complement(124205..124384)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.9e-28"
FT   misc_feature    complement(124250..124342)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   CDS             124506..126215
FT                   /transl_table=11
FT                   /locus_tag="BB4047"
FT                   /product="putative oxidoreductase"
FT                   /note="ortholog of Bordetella pertussis (BX470248)
FT                   BP3256+BP0255"
FT                   /db_xref="GOA:Q7WG72"
FT                   /db_xref="InterPro:IPR006091"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG72"
FT                   /protein_id="CAE34410.1"
FT                   /translation="MDTLSSTDTSATAASPVPDARGLNLFRADPYAAGLARCYLPADLC
FT                   DHLLPHLDRLGALAGGRMDELAMTADRHPPTLSVRHRTGTDESRIDKHPAYVELERLAY
FT                   SEFGLAALSHRGGVLGWPDPMPAAAKYALSHLFVQAEFGLCCPVSMTDSLARTLRKFGD
FT                   PALVEQVLPQVITQDFDQLQQGAMFMTEQGAGSDVSATTVTAQAQADGRWALHGDKWFC
FT                   SNPDAGFAMVLARSEPNAGLRGVSLFLLPRRLPDGSPNHYRILRLKDKLGTRSMASGEI
FT                   RLEGALAWLVGQRGQGFKHMADMINNSRLSNGMRAAGLMRRALTEAVFFAQQRRAFGKR
FT                   LIDMPLMRRQLAKMAMRAEQARSVMFQTAQALAAADRGEGEAALPRILTPLIKFRACRD
FT                   ARQVTGDAMEVRGGCGYIEEWVEPRLMRDAHLGSIWEGTSNIVALDVLRAIRKADALPA
FT                   LQRHVQALLAAGAPCPPELAPIQARAFDGAYALAAHAAAHERDDLARQAASALYHVVAI
FT                   AALRWEAARDPRLASRAALADLALRHRLAPRDPCALPADDDAACRAVLQTAL"
FT   misc_feature    125070..125378
FT                   /note="HMMPfam hit to PF02770, DE Acyl-CoA dehydrogenase,
FT                   middle domain, score 7.2e-08"
FT   misc_feature    125388..125858
FT                   /note="HMMPfam hit to PF00441, DE Acyl-CoA dehydrogenase,
FT                   C-terminal domain, score 3.9e-49"
FT   misc_feature    125730..125789
FT                   /note="PS00073 Acyl-CoA dehydrogenases signature 2."
FT   CDS             126251..127231
FT                   /transl_table=11
FT                   /locus_tag="BB4048"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0254"
FT                   /db_xref="GOA:Q7WG71"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG71"
FT                   /protein_id="CAE34411.1"
FT                   /translation="MQQLIRSLVLAAGLALLGGAAAPALADYPDRPVTLVVPFPPGGPT
FT                   DAMARRLAEGLKTQLDQTVVVENRGGAGGNIGAELVAHAKPDGYTLLFGTSGPLAINIS
FT                   LYKKQNYDPRTSFAPIVRIGHLPNILVVHPSVPANNVQELIAYAKANPDKLSYASSGNG
FT                   ASSHLAGVLFNRMAGTRILHVPYKGTGPALNDLLGGQVSMSFTDILTALPHIQAGKLKA
FT                   IGLASAQRSQALPELPTIAEQGLAGYDVSVFFGIVAPKGTPDAIVQKLNAAFIAALDAP
FT                   EVRDTLRKQGIVPAPERTPQALAGFINEEVDKWGELIRAAQISLD"
FT   misc_feature    126251..126328
FT                   /note="Signal peptide predicted for BB4048 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.989 between residues 26 and 27"
FT   misc_feature    126392..127219
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 3.5e-122"
FT   CDS             127245..128369
FT                   /transl_table=11
FT                   /locus_tag="BB4049"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0253"
FT                   /db_xref="GOA:Q7WG70"
FT                   /db_xref="HSSP:1PQY"
FT                   /db_xref="InterPro:IPR003673"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG70"
FT                   /protein_id="CAE34412.1"
FT                   /translation="MAVAALPPGALQGCRVIDLSRVLGGPYCTQILADHGADVLKIEPP
FT                   GGDETRGWGPPFSGQTASYFIGVNRNKRGMALDLSQPAGQELLRGLLADADVLVENFKP
FT                   GTLEKWGLGYDTLSQAFPRLVHCRVSGFGADGPLGGLPGYDACAQAMCGLMSVNGEADG
FT                   PATRVGLPVVDMVTGLNAAVAVLLALQERQRSGLGQFLDITLYDCALSLLHPHAPNYFY
FT                   SGRVPTRTGNAHPNIAPYETLPTGAGPIFLAVGNNRQFAALADALGAPQLAQDARFASN
FT                   AERLAHRDALCAALTELLRPHEAASLAERLLRLGVPAAAVLDVAQALDHPHARHRGMLL
FT                   EAGDYRGIASPIKLSRTPARLRSVPPALQEPAGA"
FT   misc_feature    127467..128036
FT                   /note="HMMPfam hit to PF02515, DE CAIB/BAIF family, score
FT                   2e-64"
FT   CDS             complement(128377..130131)
FT                   /transl_table=11
FT                   /gene="ggt"
FT                   /locus_tag="BB4050"
FT                   /product="gamma-glutamyltranspeptidase"
FT                   /EC_number="2.3.2.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0252"
FT                   /db_xref="GOA:Q7WG69"
FT                   /db_xref="InterPro:IPR000101"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG69"
FT                   /protein_id="CAE34413.1"
FT                   /translation="MPLRTLLAALCAAAICQAPAWAREAPGVAREDVNPEIASARSERA
FT                   QAHAQRYMIATANPLASEAGYRILRAGGSATDAIIAAQLVLNLVEPQSSGIGGGAFMVH
FT                   YDRGAGELRVYDSRETAPAAARPDRFLREGKPLSYAESVNNGRAVGTPGLLRGLELAHR
FT                   QHGKLPWQALFEPAIAMAEQGFAVSPRLHESIAGDKALAAQPAAARYFYGPDGQAWPVG
FT                   HRLRNPEFAATLRSIAREGADAFYRGPIARDIVAAVRAHPTPGDLAEADLAGYRAVVRE
FT                   PVCGLYRGYRLCGAPPPSSGPLAVLQMLGELEQYPLARMRPGSVEAVHYFSEAGRLAFA
FT                   DRDFYVADPAFVDVPVRALLDPAYLRQRGALIRPDRSMKTALPGDPQGLLAERARDDAI
FT                   EVPSTSHLVAVDAAGNVVSMTSTIEAAFGSKIFVRGFLLNNEMTDFSSSYRDPEGRLVA
FT                   NRVEPGKRPRSSMAPMIVFRAGKPVLALGSPGGSAIINYVAKTLVGVLDWKLDVQQAIA
FT                   LPNLGSRNKETELERGTALEALAPALRRMGHEVRITDFPSGIQGIVIGPHGLAGGADPR
FT                   REGLALGD"
FT   misc_feature    complement(128392..129936)
FT                   /note="HMMPfam hit to PF01019, DE
FT                   Gamma-glutamyltranspeptidase, score 1.4e-176"
FT   misc_feature    complement(130066..130131)
FT                   /note="Signal peptide predicted for BB4050 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 22 and 23"
FT   CDS             130238..131137
FT                   /transl_table=11
FT                   /locus_tag="BB4051"
FT                   /product="LysR family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0251"
FT                   /db_xref="GOA:Q7WG68"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG68"
FT                   /protein_id="CAE34414.1"
FT                   /translation="MRLRHIEIFEAIRRTGSLTEAAAALHISQPAASKLLAHAEAQLGF
FT                   KLFERVKGRLVATREAEILAPEVARLNQDLGSVRRLAASLRDRPHGHLRLGCAPALGLG
FT                   LLPGVVRASRDAQPGITFDIHTHHSAELVQGLLAHELDLAITFDANDHPGLTRTSLGHT
FT                   ELVHLSRRPGAGTTRLQELGGETLIVLDARDASGSLLQMALDAQGLAPRVAIQVQTHYV
FT                   ACALAEAGCGDAVVDAITARAMLRPGMALRRLEPALRVPISVMTRSQDALSTLHHDFIE
FT                   RLRQACSVLQAQPAPQPE"
FT   misc_feature    130244..130423
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 1.4e-16"
FT   misc_feature    130493..131101
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 5.4e-33"
FT   CDS             complement(131202..132185)
FT                   /transl_table=11
FT                   /locus_tag="BB4052"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0250"
FT                   /db_xref="GOA:Q7WG67"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG67"
FT                   /protein_id="CAE34415.1"
FT                   /translation="MNKVRTLVQAIAVATGLVAAAGAQAADAYPSKAIRVIVPFAPGGS
FT                   TDIIARLVTQRMSQELGQPMVVENKGGAGGAIGASEAARAEPDGYTLSIATVSTMAVNP
FT                   ACRPKDLPYDPIKDFQPVTNFANTANVVAVNPKFPAKDFKGFLEELKKNPGKYSYGSSG
FT                   TCGVLHLMGESFKMATGTDIVHVPYKGSGPAVADAVGGQIELIFDNLPSSMPQIQAGKL
FT                   RAMAIAWPTRIDAIKDVPTFADAGFPVLNQPVWYGLLAPKGTPMDVVNKLRDAAVVALK
FT                   DPKVIKALDDQGSAPSGNTPEEFAKEIKEQYDWAQDVVKKQNIKLD"
FT   misc_feature    complement(131214..132041)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 4.9e-105"
FT   misc_feature    complement(132111..132185)
FT                   /note="Signal peptide predicted for BB4052 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.968 between residues 25 and 26"
FT   CDS             132321..133301
FT                   /transl_table=11
FT                   /locus_tag="BB4053"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0249"
FT                   /db_xref="GOA:Q7WG66"
FT                   /db_xref="InterPro:IPR004776"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG66"
FT                   /protein_id="CAE34416.1"
FT                   /translation="MSENSSLRRDAEAPLLSIFLPGSMSVALLVLPDFMLVALGWALRH
FT                   KLGFSREFFAGTERMVYFVLFPALLFQSILRTPISAGHAMQLLQATAALMACSVALAWL
FT                   AGPVLRPAPVALASAAQCGYRFNTYIGLALAASLAGGPGQTIMALIVGFAVPMANVAAV
FT                   YGLARHSGNGLLRELARNPLLVSTLLGLACNLAGLSLPGPIDTVMARLGAAALALGIMC
FT                   VGASLAWEGGKGHGRLIGWMLAVKLAAMPSAALGIAWALGLPALETRMLVLFSALPTAS
FT                   AAYVLAMRMGGDGRMVAVLISLGTLASAATIPLWLTAAAGLGAPN"
FT   misc_feature    join(132357..132425,132483..132542,132579..132647,
FT                   132753..132821,132858..132926,132939..133007,
FT                   133032..133100,133128..133196,133209..133277)
FT                   /note="9 probable transmembrane helices predicted for
FT                   BB4053 by TMHMM2.0 at aa 13-35, 55-74, 87-109, 145-167,
FT                   180-202, 207-229, 238-260, 270-292 and 297-319"
FT   CDS             complement(133318..134709)
FT                   /transl_table=11
FT                   /gene="fumC"
FT                   /locus_tag="BB4054"
FT                   /product="fumarate hydratase class II"
FT                   /EC_number="4.2.1.2"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0248"
FT                   /db_xref="GOA:Q7WG65"
FT                   /db_xref="InterPro:IPR000362"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG65"
FT                   /protein_id="CAE34417.1"
FT                   /translation="MKTRTEKDTFGPIEVPEQHLWGAQTQRSLHFFAISTEKMPVPLVA
FT                   AMARLKRAAAKVNAELGELDPQVADAIMRAADEVVAGKWPDEFPLSVWQTGSGTQSNMN
FT                   MNEVLANRASELLGGERGEGRKVHPNDHVNRGQSSNDTFPTAMHVAAAVEVEHRVLPAL
FT                   KALRGTLAAKSAAFYDIVKIGRTHLQDATPLTLGQEISGYVAQLDLAEQQIRATLAGLH
FT                   QLAIGGTAVGTGLNAHPQFSAKVSAELAHDTGSAFVSAPNKFQALASHEALLFAHGALK
FT                   TLAAGLMKIANDVRWLASGPRSGLGEISIPENEPGSSIMPGKVNPTQCEAVTMLAAQVM
FT                   GNDVAINVGGASGNFELNVFKPLVIHNFLQSVRLLADGMVSFDKHCAAGIEPNRERITE
FT                   LVERSLMLVTALNPHIGYDKAAQIAKKAHKENLSLKEAALALGHLTEAQFAEWVVPGDM
FT                   TNARR"
FT   misc_feature    complement(133342..134679)
FT                   /note="HMMPfam hit to PF00206, DE Lyase, score 2.5e-197"
FT   misc_feature    complement(133735..133764)
FT                   /note="PS00163 Fumarate lyases signature."
FT   CDS             134861..135397
FT                   /transl_table=11
FT                   /locus_tag="BB4055"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0247"
FT                   /db_xref="HSSP:1HTW"
FT                   /db_xref="InterPro:IPR003442"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG64"
FT                   /protein_id="CAE34418.1"
FT                   /translation="MSAPPTTLCLHLPDEAATEDLARQLAPLVDGRRGGQPGGQIHLQG
FT                   DLGAGKTAFTRALLRECGIQGRIKSPSYALLESYKVSNLYFYHLDFYRFSDSREWLDAG
FT                   FRDLLRDDAVVLIEWPERAAGLLPPPDLLISLAYADQGRDASLTAHTARGQTWLNAIVP
FT                   PPTARSLPAPPPADA"
FT   misc_feature    134912..135298
FT                   /note="HMMPfam hit to PF02367, DE Uncharacterised P-loop
FT                   hydrolase UPF0079, score 2e-37"
FT   misc_feature    134993..135016
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             135469..136713
FT                   /transl_table=11
FT                   /gene="amiC"
FT                   /locus_tag="BB4056"
FT                   /product="N-acetylmuramoyl-L-alanine amidase"
FT                   /EC_number="3.5.1.28"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0246"
FT                   /db_xref="GOA:Q7WG63"
FT                   /db_xref="InterPro:IPR002508"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG63"
FT                   /protein_id="CAE34419.1"
FT                   /translation="MRTWPADEYTRVTLELDSELKAEHFTLENPHRLVVDIEGLSVNAA
FT                   LNDLVSKVRHDDPYIQGLRVAQNRPNVVRLVFDLKQSVAPQVFTLKPVADYQYRLVLDL
FT                   YPKVAQDPLMAILNKQSGPDVDDPLARVLDEIARNQPAPDQPAAPLARGQEPAPALPAP
FT                   PIKPLPAPGRSASRKRMLTIALDPGHGGEDPGAIGRSGLREKDVVLRIARRLKTLIDAQ
FT                   PYMRAYLTRDDDYFVPLHVRVQKARRVRADLFVSIHADAFIKPTANGSSVFALSERGAS
FT                   STQARWLADKENAADLIGGVNLGSHDRQVAKVLLDLSTTAQINDSLKVGSAFLDEIKKI
FT                   NRLHKNRVEQAGFAVLKAPDIPSILVETAFISNPKEEALLRSAAHQEKLAQAMMTGIDR
FT                   YFTANPPLARVGDVS"
FT   misc_feature    136195..136674
FT                   /note="HMMPfam hit to PF01520, DE
FT                   N-acetylmuramoyl-L-alanine amidase, score 8.5e-60"
FT   CDS             complement(136856..137494)
FT                   /transl_table=11
FT                   /gene="dedA"
FT                   /locus_tag="BB4057"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0245"
FT                   /db_xref="InterPro:IPR015414"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG62"
FT                   /protein_id="CAE34420.1"
FT                   /translation="MLDFFNMVLHIDQTLGIWVEQYGVWVYLVLFLIVFAETGLVVLPF
FT                   LPGDSLLFIAGAFGATGHMDPVLTAALLIVAAISGNTVNYTIGRYIGPRVFSMNLRFLD
FT                   RNALMRTHAFYEKHGGKTIVMSRFIPVIRTFAPFVAGVADMRLARFQLFNIGGALLWVI
FT                   SLVAAGYFFGNIPLVREHLNTIVLIGLGAAIVPVVIGALVRLLQVRRGQ"
FT   misc_feature    complement(join(136877..136945,136973..137041,
FT                   137231..137299,137357..137425))
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB4057 by TMHMM2.0 at aa 24-46, 66-88, 152-174 and 184-206"
FT   misc_feature    complement(136934..137413)
FT                   /note="HMMPfam hit to PF00597, DE DedA family, score
FT                   2.5e-22"
FT   CDS             137581..139470
FT                   /transl_table=11
FT                   /gene="mutL"
FT                   /locus_tag="BB4058"
FT                   /product="DNA mismatch repair protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0244"
FT                   /db_xref="GOA:Q7WG61"
FT                   /db_xref="HSSP:1BKN"
FT                   /db_xref="InterPro:IPR014790"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG61"
FT                   /protein_id="CAE34421.1"
FT                   /translation="MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARA
FT                   IEVRLEGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRGEALA
FT                   SIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQLFDRVPARRKFLRS
FT                   EATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWLPADHGQRIRDVLGAEFVGHVLP
FT                   VQAAAGAIALMGMVTRPTAARARADRQYLYVNGRFVRDRTVSHALRSAYADVLHGDRQP
FT                   AYVLYLDIDPGAVDVNVHPAKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPD
FT                   GAAPDAAYAGEPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAG
FT                   IPATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIYILAQNSRG
FT                   LVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAEKDVALVEEHETQLNELG
FT                   FEMRPSGPASIAVRSVPALLARGDIESLARAVLRDLGAVGVSRLLTEQRNELLSTMACH
FT                   GSVRANRRLTLEEMNALLRQMEITERADQCNHGRPTWVQWSVNDLDKLFLRGQ"
FT   misc_feature    137644..138036
FT                   /note="HMMPfam hit to PF02518, DE Histidine kinase-, DNA
FT                   gyrase B-, and HSP90-like ATPase, score 4.3e-10"
FT   misc_feature    137869..137889
FT                   /note="PS00058 DNA mismatch repair proteins mutL / hexB /
FT                   PMS1 signature."
FT   misc_feature    138217..138558
FT                   /note="HMMPfam hit to PF01119, DE DNA mismatch repair
FT                   protein, C-terminal domain, score 3.4e-29"
FT   CDS             139467..140408
FT                   /transl_table=11
FT                   /gene="miaA"
FT                   /gene_synonym="trpX"
FT                   /locus_tag="BB4059"
FT                   /product="tRNA delta(2)-isopentenylpyrophosphate
FT                   transferase"
FT                   /EC_number="2.5.1.8"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0243"
FT                   /db_xref="GOA:Q7U383"
FT                   /db_xref="InterPro:IPR018022"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7U383"
FT                   /protein_id="CAE34422.1"
FT                   /translation="MTPRAIICLAGPTAAGKSASTLALAQRWPLEIINVDSATIYRGMD
FT                   IGTAKPSAAERAQVPQHLLDIRDPAQSYSAAEFRADALRLIAEIHARGRIPLLAGGTML
FT                   YYKALREGLDDLPQADPALRAELEARAARLGWPALHAELALLDPATAARLSPNDSQRIQ
FT                   RALEICRLAGQPMSALLQGERRGDAPSPYRYVTLSLEPSERAALHARIAQRFDAMLAAG
FT                   LVEEVRGLHARPDLHPGLPSVRCVGYRQMWSYLDGDIDLDTAREQGVAATRQLAKRQLT
FT                   WLRAQPERVIIDCLAGDAVARTVDAMARALPD"
FT   misc_feature    139467..139541
FT                   /note="Signal peptide predicted for BB4059 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.996) with cleavage site
FT                   probability 0.522 between residues 25 and 26"
FT   misc_feature    139497..139520
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    139578..140351
FT                   /note="HMMPfam hit to PF01715, DE IPP transferase, score
FT                   5.8e-120"
FT   CDS             complement(140452..141501)
FT                   /transl_table=11
FT                   /gene="purM"
FT                   /gene_synonym="purG"
FT                   /locus_tag="BB4060"
FT                   /product="phosphoribosylformylglycinamidine cyclo-ligase"
FT                   /EC_number="6.3.3.1"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0242"
FT                   /db_xref="GOA:Q7WG60"
FT                   /db_xref="InterPro:IPR004733"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG60"
FT                   /protein_id="CAE34423.1"
FT                   /translation="MTNQHSAPLTYRDAGVDIDAGDALVDRIKPLAARTMRPGVLAGIG
FT                   GFGALFEVPKKFREPVLVSGTDGVGTKLRLAFDWNRHDTVGIDLVAMSVNDILVQGAEP
FT                   LYFLDYFACGKLSVDTAAAVVGGIARGCELAGCALIGGETAEMPGMYPDGEYDLAGFAV
FT                   GAVDKSAIIDGKSIQPGDVVLGLASSGAHSNGYSLVRKILERAGARPDQDFHGQPLVDV
FT                   VMAPTRIYVKQVLAALDRHGPAIKGLAHITGGGLLDNVPRILQPGMAAQLQRDGWEMPK
FT                   LFQWLQQQGSVADAEMHRVFNCGIGMVLVVAADQADAVAATLREQGEIVNRIGEIVPQQ
FT                   DGMAQTVVV"
FT   misc_feature    complement(140461..140970)
FT                   /note="HMMPfam hit to PF02769, DE AIR synthase related
FT                   protein, C-terminal domain, score 1.3e-45"
FT   misc_feature    complement(141001..141483)
FT                   /note="HMMPfam hit to PF00586, DE AIR synthase related
FT                   protein, N-terminal domain, score 1.1e-65"
FT   CDS             141754..142455
FT                   /transl_table=11
FT                   /locus_tag="BB4061"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0241"
FT                   /db_xref="GOA:Q7WG59"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG59"
FT                   /protein_id="CAE34424.1"
FT                   /translation="MNRQLLLDVLPAPAPTLNNYIAGPNGQALAAAHALTAGRAIYLWG
FT                   PAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADSTAPMPRLVAVDDVHRMDDAR
FT                   QAGLFALYNRWRESAATGRAFALAVSGDRAPMSLPLREDLRTRLGWDLVFRLDPLSDAD
FT                   KLAALTAQAAERGLQLAPEVINWMLTHHERDIRKLAALLDALDRYSLATGRPITIPLLR
FT                   AMLADPHSQAT"
FT   CDS             142452..143150
FT                   /transl_table=11
FT                   /locus_tag="BB4062"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0240"
FT                   /db_xref="GOA:Q7WG58"
FT                   /db_xref="InterPro:IPR006385"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG58"
FT                   /protein_id="CAE34425.1"
FT                   /translation="MTTRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRND
FT                   DLMERYNRGELTAEQAAEFMLGLLAAHSPVELAAWHEEFMRDVIRPSLTAQAVDVVRGH
FT                   LAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVR
FT                   VNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPSPGLREIAQARGWQVID
FT                   LFDHLEDAKS"
FT   CDS             143151..144506
FT                   /transl_table=11
FT                   /gene="pcnB"
FT                   /locus_tag="BB4063"
FT                   /product="poly(A) polymerase"
FT                   /EC_number="2.7.7.19"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0239"
FT                   /db_xref="GOA:Q7WG57"
FT                   /db_xref="InterPro:IPR002646"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG57"
FT                   /protein_id="CAE34426.1"
FT                   /translation="MITETIRKFVGRLFAPALRGPQRIGAERHGIDRRNVSRHAIKVCD
FT                   VLRQHGYEAYIVGGAVRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVV
FT                   FGQEIIETSTFRAPASDDQETDEHGRILRDNVFGSQEEDAARRDFTMNALYYDPHTEEV
FT                   IDYHQGVQDLKKRQVRIIGDPVKRYREDPVRMLRAVRFAAKLNGSIDTATRQPIRTMAS
FT                   LIENVPASRLFDEMLKLLTCGHAMDCLRQLRNDGLHHGLLPLLDVVLEQPGGENFVELA
FT                   LERTDARVRAGKTISPSFLFAALLWQLVDVRWKQLRAQGEHNIPALVQAADSVLDEQTE
FT                   KLAIQRRFSSDMREIWFMQPRFERRAGKTIYRMLEQPRFRAACDFLQLRAAAGEFDSVL
FT                   AQWWMDLANGDDATRAEMIEETAHLPREAGDAPAQKRRRPRRRPSNRPREPQ"
FT   misc_feature    143484..143963
FT                   /note="HMMPfam hit to PF01743, DE Poly A polymerase family,
FT                   score 6.3e-53"
FT   misc_feature    144009..144032
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             144503..144994
FT                   /transl_table=11
FT                   /gene="folK"
FT                   /locus_tag="BB4064"
FT                   /product="2-amino-4-hydroxy-6-hydroxymethyldihydropteridi
FT                   ne pyrophosphokinase"
FT                   /EC_number="2.7.6.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0238"
FT                   /db_xref="GOA:Q7WG56"
FT                   /db_xref="HSSP:1CBK"
FT                   /db_xref="InterPro:IPR000550"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG56"
FT                   /protein_id="CAE34427.1"
FT                   /translation="MNGSPASALAYVGLGANLGDAAATLRSVLAELAAAPGILACKASR
FT                   LYRTAPVDAQGPDFVNAVAALDTTLAPLDLLDLLQALEQRHGRERPYRNAPRTLDLDLL
FT                   LYGEQAIDHPRLSVPHPRMHERAFVLAPLCELAPALRLAQGDCAALLAALEDQAIEPLR
FT                   "
FT   misc_feature    144503..144568
FT                   /note="Signal peptide predicted for BB4064 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.640) with cleavage site
FT                   probability 0.365 between residues 22 and 23"
FT   misc_feature    144527..144913
FT                   /note="HMMPfam hit to PF01288, DE
FT                   7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK),
FT                   score 3.7e-51"
FT   misc_feature    144779..144814
FT                   /note="PS00794
FT                   7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
FT                   signature."
FT   CDS             complement(145013..145969)
FT                   /transl_table=11
FT                   /locus_tag="BB4065"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0237"
FT                   /db_xref="GOA:Q7WG55"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG55"
FT                   /protein_id="CAE34428.1"
FT                   /translation="MKKRIWGTLLAAAMTVGSGAAHAGYPDKAVRIVVPFAAGGGVDAL
FT                   ARPFAKELGDILGQSIVVENKPSNTGQIGATDVARAAADGYTLLLSSAAFATTPAFYPQ
FT                   VPYDPVKDFSPVMIMAAAPQVLVASNRFKAASLPDVLAQARQSDRINFALSASTGIQAL
FT                   ATAMLAGQGGVTFMTIPYKGAGAAFMDLISGEVDLMIDNPASSLVHVRAGKLRVLATTG
FT                   SKRMAILPDVPTVAETLPGFEARNWFVLAAPQGTPPAVIQKLNEASARALNTPAMRQML
FT                   ERDGIDLVADSPAHAAAFLQDEIAKWGKVVKEGNLQP"
FT   misc_feature    complement(145022..145837)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 6.5e-90"
FT   misc_feature    complement(145901..145969)
FT                   /note="Signal peptide predicted for BB4065 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.998 between residues 23 and 24"
FT   CDS             complement(145996..147390)
FT                   /transl_table=11
FT                   /locus_tag="BB4066"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0236"
FT                   /db_xref="GOA:Q7WG54"
FT                   /db_xref="InterPro:IPR005656"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG54"
FT                   /protein_id="CAE34429.1"
FT                   /translation="MTMNQAVSPLAGTPAVSAELARFAATSRWEDVPQAVRHEGRRSLL
FT                   NYFAVALAAARDPVLDTATRTYARFASDARASLVGRARRLDMLNAAALNAMAANVYDFD
FT                   DTHHPTIIHPTAPVAPALFALAETRPLSGAQLLHAFVLGVEATCRIGNAMSPGHYARGW
FT                   HITSTCGVFGAALGAARCLGLPGDAMVAALGCAAVQAGGLVETLGTAAKSISVGNAARN
FT                   GLLSALLAAEGFDGPPQPLEGVRGYLRVAADAPDIAAVSAGLGERWEVLNNTYKPYPCG
FT                   VVLNPVIDACLALAADPRIAGGGWAAIERIELTGHPLLKQRTDRPGVATGRQSQVSAQH
FT                   AVAVALVRGRAGLPEFSDEAVADAGLRALGLRLGFRDDASMSVDAVKVRIAFQDGTLLE
FT                   REVQAARGSRERPLQDGEIEEKLRELCRHGGARVDADRLIEAVWTLDEAGDAAAVMRLA
FT                   AEQPAA"
FT   misc_feature    complement(146020..147351)
FT                   /note="HMMPfam hit to PF03972, DE MmgE/PrpD family, score
FT                   1.5e-37"
FT   misc_feature    complement(146707..146751)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(147340..147390)
FT                   /note="Signal peptide predicted for BB4066 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.786) with cleavage site
FT                   probability 0.529 between residues 17 and 18"
FT   CDS             complement(147387..149489)
FT                   /transl_table=11
FT                   /locus_tag="BB4067"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0235"
FT                   /db_xref="GOA:Q7WG53"
FT                   /db_xref="InterPro:IPR004681"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG53"
FT                   /protein_id="CAE34430.1"
FT                   /translation="MSSIEMPAPVMPIEPAELAGASPYPLAIDQDFCLIRWMAAISRAC
FT                   GALATVALLLMALSMCYEIFSRYLFNAPTAWATEISGYLLVATVFFGLAAAQASNSHVQ
FT                   VELWIDRLSAPVRLRVELLCQWLALLFCVVLGWQMASFNVREYLNDTRDWGLLSTPQWM
FT                   PELAVSVGMVVFCMSILVDIYRLSPPAQAWRRWLTPALLALLAAALVALGANAVPMAAG
FT                   GRFDWGMALIVAALLACAWAWSGVRTLAHVVLVVGGCAVLYGLARGQSLGWVAFLLVAS
FT                   MMLLLFLGVRIGVALGLVGLFGVYFLLSRPQLSLLAERAWSSTNTFTLTAVPMFIFMGG
FT                   LLLRSGITAGMFDALVRWFGRAPGGLAHASAGASAVFAAVSGSSLATAATLGKVACPDM
FT                   IERGYSPRLTYGVAAAGATLGILIPPSIPMIIYGTTVGASVTHLFLAGMLPGLLLMACF
FT                   MLGALVWALAVPGSAPVARAYTLREKLSASRGMVPFVAIIGAVLGSMYTGVATPTEAAA
FT                   IGAVSAFVLCLVRRQLSWRALFEIAHDSAKVTALLLLIVVGAGIFSWVFDYLRLPREVV
FT                   NLIQGADLSPALIVAAMVLAYLVLGMFVESIAMMLMTLPVTYPIAMSLGLDPIWFGVFL
FT                   VLMIELGLITPPVGMVLFVLRSMNEKARFTDIIRGALPFVLIILLFLCLIYIYPQIVMW
FT                   LPQQVK"
FT   misc_feature    complement(join(147408..147476,147537..147605,
FT                   147663..147731,147792..147848,147954..148022,
FT                   148083..148151,148194..148262,148323..148391,
FT                   148461..148529,148566..148634,148677..148745,
FT                   148758..148811,148824..148892,148926..148994,
FT                   149070..149138,149196..149264,149292..149360))
FT                   /note="17 probable transmembrane helices predicted for
FT                   BB4067 by TMHMM2.0 at aa 44-66, 76-98, 118-140, 166-188,
FT                   200-222, 227-244, 249-271, 286-308, 321-343, 367-389,
FT                   410-432, 447-469, 490-512, 548-566, 587-609, 629-651 and
FT                   672-694"
FT   CDS             149660..150703
FT                   /transl_table=11
FT                   /locus_tag="BB4068"
FT                   /product="putative solute-binding periplasmic protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0234"
FT                   /db_xref="GOA:Q7WG52"
FT                   /db_xref="InterPro:IPR018389"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG52"
FT                   /protein_id="CAE34431.1"
FT                   /translation="MSQRFPLPRGFQAALAAAALCTASWSGAAAAQTYDLTMAVITSPG
FT                   DGYSILTASVPERVAKATDGKVKVTVSDSLVPPAQIATAVREGRVDMSAALHTYLAADE
FT                   PRMGIFNLPGLINNIQEYKQVCDAFWCEDTRKIWKDKWNAIVLAEGAWCTQQLFSKDPI
FT                   HKVEDFKGKRLRVHNPQTAEVVNALGGKPVAMPTTEIFPALERGVIDGLFISTCVGGSL
FT                   EFWRIAKNVQNWSLGPINGWAILANPDSWQKLPADVQKQVQGAMDALQQEAFGNYDTFV
FT                   SNAQQEMMKKGVTFWVAPEEERAKLMQQQYIGPSYEAWNKRAKQVGFDGPAYLDRVRTT
FT                   LGKSASN"
FT   misc_feature    149660..149752
FT                   /note="Signal peptide predicted for BB4068 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.903 between residues 31 and 32"
FT   misc_feature    149771..150628
FT                   /note="HMMPfam hit to PF03480, DE Bacterial extracellular
FT                   solute-binding protein, family 7, score 2.2e-24"
FT   CDS             150747..151490
FT                   /transl_table=11
FT                   /locus_tag="BB4069"
FT                   /product="GntR family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0233"
FT                   /db_xref="GOA:Q7WG51"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG51"
FT                   /protein_id="CAE34432.1"
FT                   /translation="MPFPFCNTNRMTSPAAPEGEFKVQRVASVLRHSVTESIRNAILVG
FT                   RFRPGERLPERELCEMTGVSRTLVREALRQLESEGLIVVIPHRGPVVERLSPEQARGIY
FT                   QVREELEGLACQLFAEHATEPQLAALQEAFQALKRALTRGTPLEQIAAKNAFYQQLLDG
FT                   AGNEALTTTLRLLNSRVMLLRSTSMQAPGRAKHSVAELSNLLQALVARDGKAARKAGSL
FT                   HVRNAASVAIAILQDSLADAAATAE"
FT   misc_feature    150846..151022
FT                   /note="HMMPfam hit to PF00392, DE Bacterial regulatory
FT                   proteins, gntR family, score 1.2e-18"
FT   CDS             complement(151507..152457)
FT                   /transl_table=11
FT                   /locus_tag="BB4070"
FT                   /product="probable oxidoreductase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0232"
FT                   /db_xref="GOA:Q7WG50"
FT                   /db_xref="InterPro:IPR016160"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG50"
FT                   /protein_id="CAE34433.1"
FT                   /translation="MQKHKIAFLGLGAMGLPMACNLVKGGHAVTGYDLNPQALDALAQA
FT                   GGQRAASAREAAAGAALVIAMLPTATHIQAALEGADGALQGMDPGALFINMSTILPQET
FT                   DLIAQRLAERGMRMLDSPVGRSAMEAQRGTLLILASGSAQDKARARDALLCMGNQVIDC
FT                   GEVGGGSRVKVVNNFMGISLNALTAEALTLAEASGLSVELALEVMRGTIAGLGHMNITY
FT                   PNKVLRGDLSAGFQVDLAHKDLGLALELAARSRACVPMGSAAFQSYTAARAQGRGGQDY
FT                   SAIYPVMRSLSGLPEALPYQVDTPVEADPFGAAAR"
FT   misc_feature    complement(151855..151878)
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT   misc_feature    complement(152401..152436)
FT                   /note="PS00895 3-hydroxyisobutyrate dehydrogenase
FT                   signature."
FT   misc_feature    complement(152401..152457)
FT                   /note="Signal peptide predicted for BB4070 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.944) with cleavage site
FT                   probability 0.517 between residues 19 and 20"
FT   CDS             complement(152512..152922)
FT                   /transl_table=11
FT                   /gene="pcaC"
FT                   /locus_tag="BB4071"
FT                   /product="4-carboxymuconolactone decarboxylase"
FT                   /EC_number="4.1.1.44"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0231"
FT                   /db_xref="GOA:Q7WG49"
FT                   /db_xref="InterPro:IPR003779"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG49"
FT                   /protein_id="CAE34434.1"
FT                   /translation="MALRPEFQTEQFQKGLAVRRAVVGDAYVDKSLNSADDLTASLQKL
FT                   VTEYCWGEVWTRPGLERKTRSFLNLAMLIALNRPNELRLHLRGAINNGVTKDEIVEVVL
FT                   QAAIYCGVPAALDAMKAVREVVETMEKEGAFA"
FT   misc_feature    complement(152551..152841)
FT                   /note="HMMPfam hit to PF02627, DE Carboxymuconolactone
FT                   decarboxylase, score 2.4e-28"
FT   CDS             153050..153877
FT                   /transl_table=11
FT                   /locus_tag="BB4072"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0230"
FT                   /db_xref="GOA:Q7WG48"
FT                   /db_xref="InterPro:IPR000209"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG48"
FT                   /protein_id="CAE34435.1"
FT                   /translation="MNCAPFDVYAIRYARHSGRIAADNYLGKVDFHDAESDLDYYVWAL
FT                   RRGDEVYVVDTGFAEDAARQRGRELLMRPAQGLALIGIDATQVRDVILTHLHYDHAGTL
FT                   GDFPAATFHVQDAEPAYATGRCMCHGPLRHPYDVEDVVGFVRKVYAGRVSFHNGQTELA
FT                   PGLSLHLVGGHTGGLQIVRVWTQRGWVVLASDASHLYGNIGHDAPFPAVYHVGDMLEGY
FT                   RTVRRLADSEAHIVPGHDPQVMQRYPAPSPELHGKVVRLDVAPTPDGLVPEAA"
FT   misc_feature    153152..153766
FT                   /note="HMMPfam hit to PF00753, DE Metallo-beta-lactamase
FT                   superfamily, score 0.00098"
FT   misc_feature    153200..153232
FT                   /note="PS00136 Serine proteases, subtilase family, aspartic
FT                   acid active site."
FT   CDS             153874..154671
FT                   /transl_table=11
FT                   /locus_tag="BB4073"
FT                   /product="beta-D-hydroxybutyrate dehydrogenase"
FT                   /EC_number="1.1.1.30"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0229"
FT                   /db_xref="GOA:Q7WG47"
FT                   /db_xref="HSSP:1DFI"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG47"
FT                   /protein_id="CAE34436.1"
FT                   /translation="MNPARPLHGRCALITGAEAGLGLAIADTLARSGADIVMHCLQANE
FT                   SARQAQAALAREHGVRVLLLQADLRDVDQIEAMAAQALAELPRLDILVNNAVVRHFEPA
FT                   HELPRAHWDESLAVNLSAAFHLARLALPGMLAQGWGRIINLSSVYGAGAAANRVGYVTT
FT                   KTALLGLTRALAVETAASGITCNAVAPGTAPTPAIVGRIAEIARRDGVAQEQAEREYLA
FT                   ARQPTGRFVAMENVAALVAFLCSDAGRDITGATLPIDGGWTAA"
FT   misc_feature    153895..154659
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 4.5e-72"
FT   misc_feature    154312..154398
FT                   /note="PS00061 Short-chain dehydrogenases/reductases family
FT                   signature."
FT   CDS             154724..155638
FT                   /transl_table=11
FT                   /locus_tag="BB4074"
FT                   /product="putative 2-hydroxy-3-oxopropionate reductase"
FT                   /EC_number="1.1.1.60"
FT                   /db_xref="GOA:Q7WG46"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG46"
FT                   /protein_id="CAE34437.1"
FT                   /translation="MTTEKHLGFVGIGRMGTPIAERLLEAGYTLTVYDTQAPALQALAA
FT                   KGAHIADSPKAVADRAETVLVSLPTPDIVLAVALGEDGLARGSAVRTVIDLSTSGSQAA
FT                   RTLADGLAAQNIASIDCPVSGGVTGAKRGTLALMVSGPRERYDALHDMFGVIGKPVYVG
FT                   ERAGMAQTMKVINNLISVTALSITSELMVMGVKAGLDPDIMLQVINSGSGRTNASEDKI
FT                   PRFVLTRSFDFGFAIGLSAKDVRLCLEESEQLGVPLRVGDAARRLLNDARDKFGNDADL
FT                   TEIIRYVEDNAGVQVRGKAADAA"
FT   misc_feature    154733..155215
FT                   /note="HMMPfam hit to PF03446, DE NAD binding domain of
FT                   6-phosphogluconate dehydrogenase, score 0.0051"
FT   CDS             155635..156435
FT                   /transl_table=11
FT                   /locus_tag="BB4075"
FT                   /product="putative oxidoreductase"
FT                   /db_xref="GOA:Q7WG45"
FT                   /db_xref="HSSP:1P33"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG45"
FT                   /protein_id="CAE34438.1"
FT                   /translation="MSTAGVAVITGGASGIGAACARRFAAQGMAVAILDVAREAGEALA
FT                   AELGAQGAPARFYACDVADAAAVQACADAVSAELGETALLVTSAALIPNTESVLDMDLA
FT                   EHDRMWRVNYHGTVHACRSFGRILRARRAGHIVTLGSINSRNALPLPAYNPGKAALARL
FT                   TELLAQELGRHGVRVNSVAPTYVMTPALQARIDAGQRDLAAMMSVHALDALPTPADIAD
FT                   AVAFLCSPQARLITGVLLPVDAGWASGVSYRTYAGGMPPQSHGA"
FT   misc_feature    155635..155709
FT                   /note="Signal peptide predicted for BB4075 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.821) with cleavage site
FT                   probability 0.464 between residues 25 and 26"
FT   misc_feature    155641..156372
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 1.7e-51"
FT   misc_feature    155662..155694
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    156235..156267
FT                   /note="PS00435 Peroxidases proximal heme-ligand signature."
FT   CDS             156470..157456
FT                   /transl_table=11
FT                   /locus_tag="BB4076"
FT                   /product="putative exported protein"
FT                   /db_xref="GOA:Q7WG44"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG44"
FT                   /protein_id="CAE34439.1"
FT                   /translation="MSGSFLKALRRAPLLALCLALLPAAAARAAYPERPVRVIVPFAAG
FT                   GGADIVARLVFKGVSEQLGQPFIIDNRGGAGGIIGTDAVAKAEADGYTLLLGQSGPNAI
FT                   NPSVYSKLPYDARKDFAPVTQLTSYPYVVAVKNGLAPNNLRELIELAKREPGTLTLSTA
FT                   GQGSSAHLAVELFMRQAGIVVIPVPYKGAGPALLDVVGGVVDMTFGDAASASKQAQAGK
FT                   IKALAVTGARRSPLIPDVPTVQEAGVPGYEASAWHAVLAPRGTPQPVIQTLYTAIAKVL
FT                   ADPQLKARLAQDGIEAVGSEPQAFGQALNAEIDKWQKVVEDAGIKLE"
FT   misc_feature    156470..156556
FT                   /note="Signal peptide predicted for BB4076 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.683 between residues 29 and 30"
FT   misc_feature    156620..157444
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 2.9e-110"
FT   CDS             complement(157490..158404)
FT                   /transl_table=11
FT                   /locus_tag="BB4077"
FT                   /product="putative sugar kinase"
FT                   /db_xref="GOA:Q7WG43"
FT                   /db_xref="InterPro:IPR011611"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG43"
FT                   /protein_id="CAE34440.1"
FT                   /translation="MAAPGPAPAALFVGHAYIDVTLLADEWPGGDDKRVARDYAVSFGG
FT                   NAVTAAFACARLGLAPDLICPQAPDWLGHMFADMAASHGVRVHPRPVRRSSLSFIMPRD
FT                   GKRAILRARDTDYLQSFPLLEVGGYRVLHLDGHQPDAALHYARACRAAGVLTSLDGGGL
FT                   RSNTAELMRHIDVAVCAERLCEQMGLSAEALLEWLRDCGCRIGAVTQGERGMLWYDEAG
FT                   AVSRLPALDIPASAVVDTSGAGDVFHGAYVWSYAARPQLPWREHFRFARAAAAYKIQHL
FT                   GNEAGLPGQDDVAAVMARWPEKA"
FT   misc_feature    complement(157535..158386)
FT                   /note="HMMPfam hit to PF00294, DE pfkB family carbohydrate
FT                   kinase, score 3.8e-19"
FT   misc_feature    complement(157649..157690)
FT                   /note="PS00584 pfkB family of carbohydrate kinases
FT                   signature 2."
FT   CDS             complement(158408..159247)
FT                   /transl_table=11
FT                   /locus_tag="BB4078"
FT                   /product="putative citrate lyase beta subunit"
FT                   /EC_number="4.1.3.6"
FT                   /db_xref="GOA:Q7WG42"
FT                   /db_xref="InterPro:IPR005000"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG42"
FT                   /protein_id="CAE34441.1"
FT                   /translation="MMQTVVRTALFVPASRPERIPKALASGADAVIVDLEDAVEHLAKD
FT                   SAREALCDFLGTHPDARLWVRINDASTAWHDDDLKACRGRPGVRGILLPKAESLMQVRH
FT                   AAQSGIPIVPIIETARGVLNAADVAGTPGVARLAFGSLDYALDLGLTPDTEAAGVALDQ
FT                   ARVQVLLHSRAAGLAQPLDGVHPGVQDTAGLRAAATRARDMGFAGMLCIHPTQVPIVHE
FT                   ALLPPLAELDWARRVVAAHRDSGAGTFMLDGKMVDAPVIARARQLLARAGEPAGQEA"
FT   CDS             complement(159244..160440)
FT                   /transl_table=11
FT                   /locus_tag="BB4079"
FT                   /product="putative CAIB/BAIF-family enzyme"
FT                   /db_xref="GOA:Q7WG41"
FT                   /db_xref="HSSP:1PQY"
FT                   /db_xref="InterPro:IPR003673"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG41"
FT                   /protein_id="CAE34442.1"
FT                   /translation="MSDVPAIRPLDGITVVSLEHAIAAPFCTRQLADMGARVIKIERPG
FT                   SGDFARGYDERVRGLSSHFVWTNRSKESLTLDLKRPGADEVLERLLASADVLVQNLAPG
FT                   AAARLGLSFEQLHARFSRLIVCDISGYGQGGPYQDKKAYDLLIQSESGFVSVTGTPDEP
FT                   VKAGCSISDIAAGMYAYSGILNALLLRGKTGVGSRIDVSMLESTVEWMGYPMYYAFDDA
FT                   PPPPRAGAAHATIYPYGPFPVGDGATIMLGLQNEREWRAFCERVLRQPELADDERYASN
FT                   SRRAANRDALRALIVAVFARLDIGEVTARLEQAQIANARVNQMRDVWEHPQLQARQRWR
FT                   EVDSPAGTLPALLPPATSNAFAARMDAVPAVGENTAAVLASLGYAPDEVARLRAAEVV"
FT   misc_feature    complement(159655..160221)
FT                   /note="HMMPfam hit to PF02515, DE CAIB/BAIF family, score
FT                   1.5e-51"
FT   misc_feature    complement(159862..159885)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(160437..161267)
FT                   /transl_table=11
FT                   /locus_tag="BB4080"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG40"
FT                   /protein_id="CAE34443.1"
FT                   /translation="MTATSLAAWIGSSECVQDSLDPIAVGRVAATLGEPAPGAGQPLPP
FT                   LWQWAFFISTVGLDGLGRDGHPARGGFLPPADDRNRMWAGGRVEFRQPLRVGVPAERLS
FT                   TVASIQEKTGRTGALLFVTVRHEYRQEGELAILEEQDIVYRQPSPPKLAGTEPAPAAQW
FT                   RETMTPSEVLLFRYSAVTFNGHRIHYDYPYVTGVEGYPGLVVHGPMIATMMVAAFRRAH
FT                   PGARLDHLSYRGLRPLIAPRPFEVAGAVAEPGLARLWAQQDDTLAHQGELRFTA"
FT   CDS             complement(161510..163033)
FT                   /transl_table=11
FT                   /locus_tag="BB4081"
FT                   /product="putative fumarate hydratase"
FT                   /db_xref="GOA:Q7WG39"
FT                   /db_xref="InterPro:IPR004647"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG39"
FT                   /protein_id="CAE34444.1"
FT                   /translation="MTVLIKEEDFIQSIADGIQFISYYHPVDYIRHLARAYEREESPAA
FT                   RDAMAQILTNSRMCAEGKRPLCQDTGIVNVFLKVGMNVRFDTQRTLQELCDEGVRRGYL
FT                   NPDNPLRASVLDDPLFARKNTRDNTPCILHVELVPGDTVDVQVASKGGGSENKSKFVML
FT                   NPSDSLVDWVLKTVPTMGAGWCPPGMLGIGVGGTAEKAMLMAKQSLMEDIDMYELLARG
FT                   PQSKLEELRIELYEKVNALGIGAQGLGGLTTVLDVKISTFPTHAASKPVAMIPNCAATR
FT                   HAHFVLDGSGPARLDPPSLSEWPEVHWAPDYNKSRQVDLDTLTKEEVASWKPGQTLLLS
FT                   GKMLTGRDAAHKRIQDMLSKGESLPVDFTNRVIYYVGPVDPVRDEVVGPAGPTTATRMD
FT                   KFTDMMLAQTGLISMIGKSERGPVAIESIRKHGSAYLMAVGGAAYLVSKAIRNAKVLAF
FT                   EDLGMEAIYEFDVKDMPVTVAVDSQGTSVHTTGPKEWQARIGKIPVAVA"
FT   CDS             complement(163102..163869)
FT                   /transl_table=11
FT                   /locus_tag="BB4082"
FT                   /product="carnitinyl-CoA dehydratase"
FT                   /EC_number="4.2.1.-"
FT                   /db_xref="GOA:Q7WG38"
FT                   /db_xref="HSSP:1HZD"
FT                   /db_xref="InterPro:IPR001753"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG38"
FT                   /protein_id="CAE34445.1"
FT                   /translation="MSELVKVEIADGIQIITVNRPEARNAINFETAQAMAAALDQLDER
FT                   DDVRIGILTGAGGTFSAGMDLKAFARTGQRPSLPERGFAALTERPPKKPLIAAVEGYAL
FT                   AGGCEMALSCDLLVAADNAKFGLPEVKRGLVPGAGGMLRLPRRLPYHIAMEIILTGDFL
FT                   DASRAHALGLVNRLTAAGGALEGALALARVIVENGPLAVQVAKSIVAQSGDWDQETMFD
FT                   RQRPQVTEIFTSADAKEGATAFAEKRKPVWQGK"
FT   misc_feature    complement(163333..163830)
FT                   /note="HMMPfam hit to PF00378, DE Enoyl-CoA
FT                   hydratase/isomerase family, score 1.3e-46"
FT   misc_feature    complement(163522..163584)
FT                   /note="PS00166 Enoyl-CoA hydratase/isomerase signature."
FT   CDS             164052..165017
FT                   /transl_table=11
FT                   /locus_tag="BB4083"
FT                   /product="conserved hypothetical secreted protein"
FT                   /db_xref="GOA:Q7WG37"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG37"
FT                   /protein_id="CAE34446.1"
FT                   /translation="MQGLQRLAAGCALFGALALPLAPASAQNNAIKLVVGAPPGGTTDT
FT                   VARSIAQHMAQDLKRTVLVENKPGAGGNIAADYVAKGKADGSTLLVTFTSFSINASLYR
FT                   NLPFDPVRDFTPISMLANVPSVLVTRKDFPARTMPEFVSLVQASPGKYTMALGAIGSSL
FT                   HMAGERMKMMAGLDILNVPYKGTSPAITDLLGGQVDMMVASSLNALPHIKSGALKALGV
FT                   TSPQPLPQFPGVPPIGDTIKGFESNAWFALFGPAGLPPETVAALNAAARKAVDTPEFRK
FT                   LLEGEAATAVSSSPQELDEFVRKDIERYAELVKFTGATVD"
FT   misc_feature    164052..164129
FT                   /note="Signal peptide predicted for BB4083 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.938 between residues 26 and 27"
FT   misc_feature    164187..165005
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 7.8e-107"
FT   CDS             165039..165818
FT                   /transl_table=11
FT                   /locus_tag="BB4084"
FT                   /product="putative GntR-family transcriptional regulator"
FT                   /db_xref="GOA:Q7WG36"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG36"
FT                   /protein_id="CAE34447.1"
FT                   /translation="MPDSPLPLYHKVYLLLKQRLQSGGFALNAAMPGENALAAEYGVSR
FT                   LTIRRSLEALESEGLIERRQGRGTFAAEGAILSAPQHSADIDTLMAHLARMGMHTQVNL
FT                   LELDTVPATPQVAAQLELPAGAPVQRAVRVRSHQGLPFSYLVTYVPGEIGQRIRREDLG
FT                   AKPLLAIFRDLGVRVARAQQSISAVLAEPGTAGALDVPVGSALLSLQRLVRDDAGRPVE
FT                   WLHALYRPDRYEYRLDMQAHDTPGQPTWLPAGAPRRA"
FT   misc_feature    165072..165251
FT                   /note="HMMPfam hit to PF00392, DE Bacterial regulatory
FT                   proteins, gntR family, score 3.9e-19"
FT   CDS             165841..167103
FT                   /transl_table=11
FT                   /locus_tag="BB4085"
FT                   /product="putative 3-isopropylmalate dehydratase large
FT                   subunit"
FT                   /EC_number="4.2.1.33"
FT                   /db_xref="GOA:Q7WG35"
FT                   /db_xref="InterPro:IPR015937"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG35"
FT                   /protein_id="CAE34448.1"
FT                   /translation="MPAQTLAQKLLAAAAGRDAVRVGEIVTCKVDLAMFHDSSGPRRLQ
FT                   PMLEELGTGLWDRSRIVLVMDHYVPESDDESRRIVRIARDWAREQALPHVYDSLGICHV
FT                   VVPEHGHVRPGMFCVGGDSHSPTGGAFGAYMFGVGSTEMLGVVSSGEIWMRVPDTLMMH
FT                   WRGRLRPGVMAKDMMLHMIGLHGMNGGRYQAVEFCGEAVRALSMQERMTLSNMSAELGA
FT                   QAGLIAPDRTTAQYLRQAGAPEPDTARWQSDPDAPAQWHEYDADSLPPYVAAPHSPANA
FT                   APVQAYADTAVQVAYIGACTGAKLDDLRAAAQVLRGRRVAPGVSLLVAPASQRDQARAQ
FT                   DEGVLPALVEAGATVLPTTCGACSGYGGSIPDGANVISTTARNFKGRMGAASARVYLAS
FT                   PYTVAASALAGRIADPREVLS"
FT   misc_feature    165853..167070
FT                   /note="HMMPfam hit to PF00330, DE Aconitase family
FT                   (aconitate hydratase), score 1.1e-54"
FT   CDS             167100..167615
FT                   /transl_table=11
FT                   /locus_tag="BB4086"
FT                   /product="putative 3-isopropylmalate dehydratase small
FT                   subunit"
FT                   /EC_number="4.2.1.33"
FT                   /db_xref="GOA:Q7WG34"
FT                   /db_xref="InterPro:IPR015937"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG34"
FT                   /protein_id="CAE34449.1"
FT                   /translation="MSETHQAWRVGDDVDTDQLAPGAYMKLGIADIARHCLEGVRPDFA
FT                   GGVRPGDVLVAGRNFGIGSSREQAAAALVQLGLRAVIAPSYSGLYFRNAFNVGLLLLTC
FT                   DRAGEIAEGERIRIDLPNQRVLRADGTPLPCEPVPAFLLDMVQAGGLLMQLKRRLADGS
FT                   LPRYPMKA"
FT   misc_feature    167106..167534
FT                   /note="HMMPfam hit to PF00694, DE Aconitase C-terminal
FT                   domain, score 1.4e-06"
FT   CDS             167615..168478
FT                   /transl_table=11
FT                   /locus_tag="BB4087"
FT                   /product="putative isocitrate lyase-family enzyme"
FT                   /db_xref="GOA:Q7WG33"
FT                   /db_xref="HSSP:1UJQ"
FT                   /db_xref="InterPro:IPR018523"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG33"
FT                   /protein_id="CAE34450.1"
FT                   /translation="MTPASLKHKLAAGQTLLAPGVYDALSALIAEQAGFDAVYLSGASI
FT                   AYTRLGRSDVGLTTYSEVEDVLARITERVRCPVIVDADTGFGNALNVQRTVRGFERAGA
FT                   AMIQLEDQDFPKRCGHLAGKSLVPADEMCGKLRAALDARASDGTLILARTDAVAVEGID
FT                   AAFERAERYLECGVDALFIEALRSPQQLDAACARFAARVPLLANMVEGGQTPVESAQAL
FT                   AERGFRIVIFPGGTARAVSHALQDYYGSLREHGTTAPWRARMLDFDQLNALIGTPALLE
FT                   TAERYR"
FT   misc_feature    167960..167977
FT                   /note="PS00161 Isocitrate lyase signature."
FT   CDS             complement(168475..169665)
FT                   /transl_table=11
FT                   /locus_tag="BB4088"
FT                   /product="probable transporter"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0032"
FT                   /db_xref="InterPro:IPR000600"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG32"
FT                   /protein_id="CAE34451.1"
FT                   /translation="MSDHDASFSLKDIAVPAFGPSILYGVSNGAILPVVALTARELGAS
FT                   LATSGLIVGLVGIGSLVSNIPAAMFTSRHGERRSMVGAAALSVVALLLCIFAGTLWMLA
FT                   TGVFMVGMASSVFLLARQGYMIDAVPAYMRARALSTLAGTMRIGVFAGPFAGAALIHFM
FT                   GLQGAYWVAAVAMTGAGLIAWFAPDMAPPRRRGEAAVARPRLLDVARAHRQVYLTLGLG
FT                   ILLVSAVRASRQVVIPLWADHLGVNPATTSLIYGLVAAIDMSVFYPAGMLMDRRGRLWV
FT                   AVPSTLLMGCALIGTSLTSGVAGFVIVAMMLGMGNGIGSGIVMTLGADAAPASGRTEFL
FT                   GLWRLMSDLGGSLGPVALSGITALVSLAAGVAAMGGVGLAAAAVFWHWLPRGQAPR"
FT   misc_feature    complement(join(168499..168567,168580..168648,
FT                   168685..168753,168763..168831,168850..168918,
FT                   168955..169023,169108..169167,169177..169245,
FT                   169306..169410,169453..169521,169555..169623))
FT                   /note="11 probable transmembrane helices predicted for
FT                   BB4088 by TMHMM2.0 at aa 15-37, 49-71, 86-120, 141-163,
FT                   167-186, 215-237, 250-272, 279-301, 305-327, 340-362 and
FT                   367-389"
FT   misc_feature    complement(168502..169632)
FT                   /note="HMMPfam hit to PF00083, DE Sugar (and other)
FT                   transporter, score 0.0013"
FT   misc_feature    complement(168628..168663)
FT                   /note="PS00213 Lipocalin signature."
FT   misc_feature    complement(168658..168738)
FT                   /note="PS01125 ROK family signature."
FT   CDS             169892..170866
FT                   /transl_table=11
FT                   /gene="glyQ"
FT                   /gene_synonym="glyS(a)"
FT                   /locus_tag="BB4089"
FT                   /product="glycyl-tRNA synthetase alpha chain"
FT                   /EC_number="6.1.1.14"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0033"
FT                   /db_xref="GOA:Q7WG31"
FT                   /db_xref="HSSP:1J5W"
FT                   /db_xref="InterPro:IPR006194"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG31"
FT                   /protein_id="CAE34452.1"
FT                   /translation="MAGFPRCRLARGLPRPDFLTPMLTFQQIILTLQDYWDKQGCALLQ
FT                   PYDMEVGAGTSHTATFLRAIGPEPWRAAYVQPSRRPKDGRYGENPNRLQHYYQYQVVLK
FT                   PAPPEILDLYIGSLKALGIDPTQHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTY
FT                   FQQVGGLDCTPTTGEITYGLERLAMYLQDVESVYDLVWTEGANGNRVYYRDVFHQNEVE
FT                   QSTYNFEHASADMLFAHFNDYEAEAKRLMDVPLALPAYEAALKAAHTFNMLDARGAISV
FT                   TERAAYIGRIRNLSRAVAQAYYDSRERLGFPMLAGRKAAGEAA"
FT   misc_feature    169964..170830
FT                   /note="HMMPfam hit to PF02091, DE Glycyl-tRNA synthetase
FT                   alpha subunit, score 9.3e-229"
FT   misc_feature    170429..170458
FT                   /note="PS00339 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 2."
FT   CDS             170868..173006
FT                   /transl_table=11
FT                   /gene="glyS"
FT                   /gene_synonym="glyS(b)"
FT                   /locus_tag="BB4090"
FT                   /product="glycyl-tRNA synthetase beta chain"
FT                   /EC_number="6.1.1.14"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0034"
FT                   /db_xref="GOA:Q7WG30"
FT                   /db_xref="InterPro:IPR008909"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG30"
FT                   /protein_id="CAE34453.1"
FT                   /translation="MTTDIRPLLVELFTEELPPKALQKLGQAFAEGVRATLARHHLLAD
FT                   GCAVEPFATPRRLAVRLSAVLAQAPEQAYAEKLMPVKVGLDANGQPTAALAKKLAAKGL
FT                   EGLDPATLERESDGKQEYLVARGTAAGAQLAVGLQEGLDAAIDGLPIPKVMRYQLADGQ
FT                   TTVKFVRPAHGLVALFGADIVPIAALGLQAGRATQGHRFQSNGAIELATAQGYEADLAE
FT                   RGRVIASFEARRAEISRLLDEHAQRLGATLGDDPEVTALLDEVTALVEHPTVYVGQFEE
FT                   QFLQVPQECLILTMRLNQKYFPLFDPASGKLTHRFLIVSNMQVADPANIVEGNQRVVRP
FT                   RLADAQFFFETDRKTPLAARVEQLGSIVYHNKLGTQLERVERVRAIARGIATALGGDAA
FT                   HCDRAALLAKADLGSNMVGEFPELQGIMGAYYAQGDGEPADVVTALRTQYRNRYDAPVD
FT                   AATLTAATLFIAERIETLVGIWSIGLAPTGERDPFGLRRAALGLISAFEQLAAGGWLKV
FT                   SEDGPLSLDGLLALAAQAFPDGKIGADTLAEVRAFIYERYRNQLIGEHDRNAVEAVIAL
FT                   APPLHQVAARVRAVAAFAQLPAAASLAAANKRIGNLLKKAEGEIGAVDAALLQDPAEKA
FT                   LAEAVAQLRPQARAQLQAGDFAASLATLAQAREPVDAFFADVMVMADDAALRANRLALL
FT                   GQLHGLMNQVADISRLAQ"
FT   misc_feature    170889..172607
FT                   /note="HMMPfam hit to PF02092, DE Glycyl-tRNA synthetase
FT                   beta subunit, score 1.1e-138"
FT   CDS             173003..173542
FT                   /transl_table=11
FT                   /locus_tag="BB4091"
FT                   /product="putative haloacid dehalogenase-like hydrolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0035"
FT                   /db_xref="GOA:Q7WG29"
FT                   /db_xref="InterPro:IPR006543"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG29"
FT                   /protein_id="CAE34454.1"
FT                   /translation="MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWT
FT                   VVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLP
FT                   GMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTR
FT                   VCEDLAAVAEQLLQEA"
FT   misc_feature    173003..173443
FT                   /note="HMMPfam hit to PF00702, DE haloacid
FT                   dehalogenase-like hydrolase, score 0.042"
FT   CDS             173546..174274
FT                   /transl_table=11
FT                   /locus_tag="BB4092"
FT                   /product="probable acyltransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0036"
FT                   /db_xref="GOA:Q7WG28"
FT                   /db_xref="InterPro:IPR002123"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG28"
FT                   /protein_id="CAE34455.1"
FT                   /translation="MAWLRSALYALFLIVTVIPYAFACILWAPLPLHWRYRLTVGWPRL
FT                   AIWGARVICGIRWRIKGAENLPDGPAILLSKHQSAWETLFFPAHMPREVCFVYKKELHM
FT                   VPFFGWGLALLRMIPIDRAKGRDAFEQVVRQGQVRLDEGRWPLLFPEGTRVPPGKTGRF
FT                   KMGGALLASRTGARIIPVAHNAGECWRRNAFVKRPGLITVSIGPAIESQDVAPEVLNAK
FT                   VQAWIEGEMRVLNPERYGQA"
FT   misc_feature    173546..173614
FT                   /note="Signal peptide predicted for BB4092 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.997) with cleavage site
FT                   probability 0.995 between residues 23 and 24"
FT   misc_feature    173732..174247
FT                   /note="HMMPfam hit to PF01553, DE Acyltransferase, score
FT                   1e-24"
FT   CDS             174261..175169
FT                   /transl_table=11
FT                   /locus_tag="BB4093"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0037"
FT                   /db_xref="InterPro:IPR002725"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG27"
FT                   /protein_id="CAE34456.1"
FT                   /translation="MAKPDQLELLFDVAPPADPASAAPPGAPPRKTPKARPAPPAPAAI
FT                   ATPCPDPLPPGARWREVHTEQQPIGFVLLRSRRRSIGFVVADDGLRVTAPNWVTLGQID
FT                   DAVREKARWILAKLRDWHARKEQLAMAHTRWQAGGELPYLGKRIVLGLGAERRQACLSG
FT                   DADAPCDGDTLWLALPVDADQARIRDAAQAWLQQRAGAWFGARLAHFLQLTGLRIRRWR
FT                   LSSAATRWGSCTSDGNIMLNWRLIHFAPAIIDYVIAHELAHLREMNHSQDFWTEVGHIL
FT                   PGFEDAKNVLRRHDPATLPQF"
FT   misc_feature    174468..175151
FT                   /note="HMMPfam hit to PF01863, DE Protein of unknown
FT                   function DUF45, score 3.9e-07"
FT   CDS             175240..175635
FT                   /transl_table=11
FT                   /gene="gloA"
FT                   /locus_tag="BB4094"
FT                   /product="lactoylglutathione lyase"
FT                   /EC_number="4.4.1.5"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0038"
FT                   /db_xref="GOA:Q7WG26"
FT                   /db_xref="HSSP:1F9Z"
FT                   /db_xref="InterPro:IPR004361"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG26"
FT                   /protein_id="CAE34457.1"
FT                   /translation="MRLLHTMLRVGNLDKSIDFYTSVLGMRELRRKDYPDGRFTLAFVG
FT                   YQDESEAAAIELTHNWDTEKYDLGTGYGHIAIEVDNAYEACDKVKEKGGKVTREAGPMK
FT                   HGTTVIAFVEDPDGYKIEFIQKKGRND"
FT   misc_feature    175252..175317
FT                   /note="PS00934 Glyoxalase I signature 1."
FT   misc_feature    175264..175629
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00903, DE Glyoxalase/Bleomycin
FT                   resistance protein/Dioxygenase superfamily, score 4.6e-40"
FT   misc_feature    175444..175482
FT                   /note="PS00935 Glyoxalase I signature 2."
FT   CDS             175645..176175
FT                   /transl_table=11
FT                   /locus_tag="BB4095"
FT                   /product="peptide deformylase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0039"
FT                   /db_xref="GOA:Q7WG25"
FT                   /db_xref="InterPro:IPR000181"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG25"
FT                   /protein_id="CAE34458.1"
FT                   /translation="MIHAILKMGDPRLLRVAAPVERYDTPELRALIDDMFETMAHAQGV
FT                   GLAAPQIGVDLQLVIFGFERNDRYPDAPAVPRTILCNPVIEPLSGEMEDGWEGCLSVPG
FT                   LRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARVVQHECDHLIGRLYPTRIRDLTKFGY
FT                   TEVLFPEMDPNAD"
FT   misc_feature    175645..176139
FT                   /note="HMMPfam hit to PF01327, DE Polypeptide deformylase,
FT                   score 1.9e-45"
FT   CDS             complement(176304..178451)
FT                   /transl_table=11
FT                   /locus_tag="BB4096"
FT                   /product="putative oxidoreductase"
FT                   /note="ortholog of Bordetella pertussis (BX470248)
FT                   BP3335+BP0040"
FT                   /db_xref="GOA:Q7WG24"
FT                   /db_xref="InterPro:IPR006092"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG24"
FT                   /protein_id="CAE34459.1"
FT                   /translation="MPGMSDTEREAIEAGDVWWDADLFTGNPDWRKLLDVPPAELTAAE
FT                   QRFIDGPVAQLCAMLDEWDITWSRRDLPEPVWQFMKSQRFFGMIIPEQYGGLGFSPYAH
FT                   SEVVRRISAYSITAGVTVMVPNSLGPGELLLQFGTPEQREFWLPRLADGTEVPCFGLTS
FT                   PEAGSDAASMTDTGVVCRQVVDGREMLGIRLNWHKRYITLGPVATVLGLAFKLSDPEGL
FT                   LGGPADIGISVALVPTEAPGVEIGRRHLPAMQVFQNGPNRGRDVFVPIEALIGGPARAG
FT                   QGWQMLMSALAAGRGISLPSLSAAAAVVSARATGMYARIRRQFGIPVGQFEGVQEKLAR
FT                   LAGNAYLVEAARRLTCAALNQGHKPAVISAIMKYHATERMRESVDDAMDVHAGKAVIDG
FT                   PSNYLGNLYRAVPIAITVEGANILTRCLIVFGQGAIRAHPYLMGEVLALGDQDTQRGLE
FT                   AFHGLFWKHLGHAGANTLRAWGRAWTGGLLARAPVSGPTAIHYRQLSRYAAAFALLADV
FT                   ALGALGGALKRREMISARLGDILSELYLLSAVLKRWEDEGRCHGDLALVRWCMEDGRHR
FT                   IETRIDQVLSNLPNRPLAWLVRALILPVRLARGPSDALTRECAALLLSPSRTHDRLAAD
FT                   LQRDGDDPLGRLERAFALATAVQPLLDRLRREGVPDWRDALRGGALTPEQAAEIEAAEA
FT                   AVAGVLAVDDFAPQELTGRGR"
FT   misc_feature    complement(177168..177611)
FT                   /note="HMMPfam hit to PF00441, DE Acyl-CoA dehydrogenase,
FT                   C-terminal domain, score 4.2e-28"
FT   misc_feature    complement(177978..178319)
FT                   /note="HMMPfam hit to PF02771, DE Acyl-CoA dehydrogenase,
FT                   N-terminal domain, score 0.0004"
FT   CDS             178801..179889
FT                   /transl_table=11
FT                   /locus_tag="BB4097"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3334"
FT                   /db_xref="GOA:Q7WG23"
FT                   /db_xref="InterPro:IPR011415"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG23"
FT                   /protein_id="CAE34460.1"
FT                   /translation="MVLLFGTLTLWLGFLRIAEAAGLVERLASLLGPLFARLMPEVPRG
FT                   HPAIGLITLNFAANGLGLDNAATPIGLRAMRELQSLNPNPDTASNAQILFLVLNASSLT
FT                   LLPVTLFMFRAQQGAADPTLIFLPILLATSASTLAGLLAVAFCQRLRLHDPVVLAWLGS
FT                   AALALGAFMVMLAGMSAAAIAALSSLLGNLTLFAVLLAFLVAGAWKKVPVYETFIAGAK
FT                   DGFNIARDLLPYLVAMLCAIGVLRASGALDFALDGMRWLAHAAGWDTRFVDALPTALVK
FT                   PFSGSAARAMMLETMSHFGVDSFPALLAAVMQGSTETTFYVLAVYFGSVGIVRARHAVG
FT                   CALAADLAGVLASIGVCYWFFG"
FT   misc_feature    178801..178860
FT                   /note="Signal peptide predicted for BB4097 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.686) with cleavage site
FT                   probability 0.648 between residues 20 and 21"
FT   misc_feature    join(179077..179145,179173..179241,179266..179334,
FT                   179344..179412,179491..179550,179728..179796,
FT                   179815..179883)
FT                   /note="7 probable transmembrane helices predicted for
FT                   BB4097 by TMHMM2.0 at aa 93-115, 125-147, 156-178, 182-204,
FT                   231-250, 310-332 and 339-361"
FT   misc_feature    179407..179883
FT                   /note="HMMPfam hit to PF03751, DE Domain of unknown
FT                   function (DUF311), score 2.2e-40"
FT   CDS             complement(179892..181334)
FT                   /transl_table=11
FT                   /gene="pykA"
FT                   /locus_tag="BB4098"
FT                   /product="pyruvate kinase"
FT                   /EC_number="2.7.1.40"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3333"
FT                   /db_xref="GOA:Q7WG22"
FT                   /db_xref="HSSP:1E0T"
FT                   /db_xref="InterPro:IPR018209"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG22"
FT                   /protein_id="CAE34461.1"
FT                   /translation="MPVLRRTKIVATLGPATSTPERLDGLIRAGMDVARLNFSHGSAQD
FT                   HRERVRLVRELAAEQGRFVALMGDLQGPKIRIARFTDQQVTLQAGQPFTLSRSHSKEAG
FT                   DATIVGIDYPELVQDCRPGDELLLDDGRVVLVVDSVGAEEVHTTVTVGGPLSNNKGINR
FT                   RGGGLSAPSLTDKDRTDIKLAAEMELDYVAVSFPRYGADIDEARALLRAAGSQAWIIAK
FT                   IERAEAVADDDALDALIRASDGVMVARGDLGVEVGDAELVGIQKRIIQHARTLNKVVIT
FT                   ATQMMESMVASPMPTRAEVSDVANAVLDYTDAVMLSAESASGQYPIEAVAAMARVCLGA
FT                   EKHPTTTHSHHRLGETFTRCDETIALAAMYAANHFPGVKAIIALTESGHTPLIMSRIRS
FT                   GVPIYCYSPHGPTQRRAALFRGVYTVPFAPAEYDPADLSNAAIDELKKRGRVAAGDWVI
FT                   LTKGDFYRDSGGTNGLKILKVE"
FT   misc_feature    complement(179901..180254)
FT                   /note="HMMPfam hit to PF02887, DE Pyruvate kinase,
FT                   alpha/beta domain, score 4e-24"
FT   misc_feature    complement(180285..181334)
FT                   /note="HMMPfam hit to PF00224, DE Pyruvate kinase, barrel
FT                   domain, score 8.3e-165"
FT   misc_feature    complement(180648..180686)
FT                   /note="PS00110 Pyruvate kinase active site signature."
FT   CDS             181439..182584
FT                   /transl_table=11
FT                   /gene="garK"
FT                   /locus_tag="BB4099"
FT                   /product="glycerate kinase"
FT                   /EC_number="2.7.1.31"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3332"
FT                   /db_xref="GOA:Q7WG21"
FT                   /db_xref="InterPro:IPR018193"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG21"
FT                   /protein_id="CAE34462.1"
FT                   /translation="MKIVIAPDSFKESLSAPDAAAAIARGVRQACPGAHTLCIPMADGG
FT                   EGTVQAVLAATGGQWRETTVRGALGEPVRARWGWLPDDATAVIEMAAAAGLELAPPAQR
FT                   DPLRACSHGVGELIRAALDAGARRLIVGLGGSATNDGGAGMLTALGVRWLDADGRALAP
FT                   GGAALADLRQVDASGLDARLRGVVVEIASDVDNPLCGPHGASHTFGPQKGATPEQVRQL
FT                   DAALAHMAEIVTRAGHPDQRAAPGAGAAGGLGYAALAFLSARLRPGVEIVAELGQLAQA
FT                   VAGATLVFTGEGRIDAQTLRGKTPAGVARIASAAGVPVVALAGSLGEGYQDLHAGGITA
FT                   AFSLAPGPITLQQACEQAETLLAERARDIMQLWVAAGRRML"
FT   misc_feature    181439..182572
FT                   /note="HMMPfam hit to PF02595, DE Uncharacterized BCR,
FT                   COG1929, score 2.7e-177"
FT   misc_feature    182327..182350
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(182616..183413)
FT                   /transl_table=11
FT                   /gene="ksgA"
FT                   /gene_synonym="rsmA"
FT                   /locus_tag="BB4100"
FT                   /product="dimethyladenosine transferase"
FT                   /EC_number="2.1.1.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3331"
FT                   /db_xref="GOA:Q7WG20"
FT                   /db_xref="InterPro:IPR011530"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG20"
FT                   /protein_id="CAE34463.1"
FT                   /translation="MSAHQARKRFGQHFLTDESVVESIVRAIGPARDDRVVEIGPGLSA
FT                   LTRPLLDRIDHLTAVEIDRDLAARLRRQYPAERLTVVEADALTVDFAQFGQGLRVVGNL
FT                   PYNISSPLLFHLMGAAEQVRDQHFMLQREVIDRMVAEPGSGDYSRLSVMLQARYRMEKL
FT                   FDVAPEAFDPPPRVVSAVVRMAPLPADRLRPASDAAFETVVARAFSQRRKMLRRVLGDW
FT                   AALTPWDELGIAPTARAEEVGVAQFIGLADALLAAGAPGLARP"
FT   misc_feature    complement(182658..183380)
FT                   /note="HMMPfam hit to PF00398, DE Ribosomal RNA adenine
FT                   dimethylase, score 1.7e-61"
FT   CDS             complement(183438..184997)
FT                   /transl_table=11
FT                   /locus_tag="BB4101"
FT                   /product="putative peptidyl-prolyl cis-trans isomerase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3330"
FT                   /db_xref="GOA:Q7WG19"
FT                   /db_xref="HSSP:1J6Y"
FT                   /db_xref="InterPro:IPR015391"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG19"
FT                   /protein_id="CAE34464.1"
FT                   /translation="MMRSLHSLRRMSGTVLALMLAAGLPLSAAQAQPAKPAPKGDQKPA
FT                   TPAPSEQFVDGIAAIVNKDVITLREVREASKLASADLQKRGIQVPDERTLQKQVLQRLI
FT                   MERLERQEADRMGIRVDEAQVDQAINMIASRNKITPAAMRAEIEKSGVTWEQYRKSLRD
FT                   DIRMDRLRQRAVDANIIISDAEVDAFLKDQERNPAAAQATRAPAPQQPQPQPRQPAQSG
FT                   PAMLVLAQILVRVPEGSSPDQVAALRKKAEGLLARAKKGDDFASLAAANSDGPEALQGG
FT                   MMGARPLDGWPDLFVKAAGSLSAGQVSGLVQSGNGFHILKVVDRAGGGQPAQAARPAPA
FT                   PAPQQPSSFQEGPSVAAPQGPVRVTQTHARHILIKTSTVMTDDQARQRLEQIRERLQGG
FT                   AVKFEDMARQYSQDSTAPQGGDLGWVNPGDTVPPFEAAMNALQPNEISPPVLSPFGWHL
FT                   IQVLERREHDVSDEVQRMRARQLLFERRAVPAFEDWLEQLRSQAFIDNRLEKQERLEQN
FT                   NR"
FT   misc_feature    complement(183609..183908)
FT                   /note="HMMPfam hit to PF00639, DE PPIC-type PPIASE domain,
FT                   score 1e-36"
FT   misc_feature    complement(184026..184331)
FT                   /note="HMMPfam hit to PF00639, DE PPIC-type PPIASE domain,
FT                   score 9.5e-13"
FT   misc_feature    complement(184905..184997)
FT                   /note="Signal peptide predicted for BB4101 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.804 between residues 31 and 32"
FT   CDS             complement(184994..187366)
FT                   /transl_table=11
FT                   /locus_tag="BB4102"
FT                   /product="putative outer membrane (permeability) protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3329"
FT                   /db_xref="GOA:Q7WG18"
FT                   /db_xref="InterPro:IPR007543"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG18"
FT                   /protein_id="CAE34465.1"
FT                   /translation="MRMLRWLILSAFSVAGAVQAQGNQDSAAASAPSASIGAPVLRTSP
FT                   GLRVHRLPDEKIPAFMEADQISGDPDSEVTLTGNAQVRRVDGIIKGDRINYRRDTGDVD
FT                   VQGSARMLRDGTLITGPSARLNVDTYSGEIQEPNFWIGASGGTAQARHADIFSKSQMRL
FT                   SQVTYSGCPCPKPSWYIKADTVDLDFDENEGVARNGVLYFKDVPILASPYLTFPVKKER
FT                   KSGFLMPTYGTTSNSGFDISLPYYFNLAPNYDLTLVPRYLSKRGAQLGGEFRYLGSGYR
FT                   GVAIGTYLPDDNETGRDRWMYRTYHRQLLGNGFYTDWDIAGASDDNYFRDISELGLNTA
FT                   STTYLPRRGRVGWSSTYWQTYAQVYKYQTLQDPDAPLAPPYDKVPELWLKGARYDWGGF
FT                   DAEWVSTAVRFQRPLLNGRRLGPDGDRLQTYPTVSYPIVRPGWFLVPKVGVHYTQYRTD
FT                   WYNRDWNRIGLSNYKRTESRTVPIMSLDAGMIFERDASLFGKAATQTLEPRLYYLRVPY
FT                   RDQSALPVYDTTLADFSFDQAFQENIYTGGWDRIANANQLTAALTTRWLDANTGFERLS
FT                   LSAAQRIYFQDQEVTLPAEQPRKNVRSDFLVGATAALTDTLTTDVAAQYNPYDNKWSRG
FT                   MVSARWSPQRLTTVAVAYRYQRDPLPGISYQPQGQNQVSLAVQWPIHRRWYGVGRVDYS
FT                   LRSEPATAAAAEQSPRVTQAIAGLEYKGDCCWVGRVVYQRYAVSAADTNTALFFQLELT
FT                   GLGALGTDPISLLNRSIPGYQSVVPPTPTGTTFERYE"
FT   misc_feature    complement(187307..187366)
FT                   /note="Signal peptide predicted for BB4102 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.919 between residues 20 and 21"
FT   CDS             187476..188579
FT                   /transl_table=11
FT                   /locus_tag="BB4103"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3328"
FT                   /db_xref="InterPro:IPR002575"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG17"
FT                   /protein_id="CAE34466.1"
FT                   /translation="MPGTGLPIRGRRDPETIETRCLNNDQDSRLALIHAWLQTLPGSLG
FT                   LRPETMEPASSDASFRRYFRLQAAAGTLIVMDAPPPHEDVRPFVHIDGLLREAGVNVPE
FT                   IVAQDAGQGLLLLSDLGQDTFYQRIRAGISDAQLQSMYRDTLATLVRLQQASTAGLPAY
FT                   DGARLAAELELFPEWYVGRHHGVTLDDKTAAALRQIFGLLAAEGDTGHRVLVHRDFHSP
FT                   NLMVCDEPRYGPNPGVIDFQDALAGPLTYDLASLVTDARTTWEEPQQLDWAIRYWELAR
FT                   AAGLPVDADFAQFHRAYEWMGLQRNLRILGVFARLNHRDGKSIYLSHMPRVSGYVRQVA
FT                   QRYGAFAPLLRLLDKLDDRQVQVGYTF"
FT   CDS             188579..189271
FT                   /transl_table=11
FT                   /locus_tag="BB4104"
FT                   /product="putative nucleotidyl transferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3327"
FT                   /db_xref="GOA:Q7WG16"
FT                   /db_xref="HSSP:1H5R"
FT                   /db_xref="InterPro:IPR005835"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG16"
FT                   /protein_id="CAE34467.1"
FT                   /translation="MRAMILAAGRGERMRPLTDTTPKPLLAVGGKPLIVWHIERLVAAG
FT                   LRDIVINHAWLGQRIVDHLGDGGAYGARLRYSAEAAALETAGGIAQALPLLGDAPFLVI
FT                   NGDIWCDWDPAQARRQAAALDAAGAQAWLLLVDNPPQHPQGDFRLEDDGRVADDGAPKL
FT                   TFAGIGLYRPALFDPVARGSAAPLAPLLRQAMARRAVIGARHAGRWTDVGTPQRLAALD
FT                   GQLRPEGT"
FT   misc_feature    188582..189262
FT                   /note="HMMPfam hit to PF00483, DE Nucleotidyl transferase,
FT                   score 6.6e-13"
FT   CDS             189415..190116
FT                   /transl_table=11
FT                   /locus_tag="BB4105"
FT                   /product="putative inner membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3326"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG15"
FT                   /protein_id="CAE34468.1"
FT                   /translation="MAFGRSQRQVFKPSVYQPGKRTRRMPRWLVLLLVGIALGAGGVLF
FT                   LQTNYGPQRLTVEQSEQLHTELSAANLERQRLQTQLDEAIGQRDANKSTHEQLTTDLAQ
FT                   ARTRIDTLNQELLLFQDAMPPDPRGGDIGVRSAVFKRQPGQLSYQVLIMRENHAGPAFK
FT                   GNVTLAIEGSYANGRRGTLTPDPLALDLQRYNNTQGVLPLPDGFTPRSVTIRVLDGQQK
FT                   QHAMRIYYVRG"
FT   misc_feature    189415..189552
FT                   /note="Signal peptide predicted for BB4105 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.773) with cleavage site
FT                   probability 0.492 between residues 46 and 47"
FT   CDS             complement(190101..190478)
FT                   /transl_table=11
FT                   /locus_tag="BB4106"
FT                   /product="putative pterin-4-alpha-carbinolamine
FT                   dehydratase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3325"
FT                   /db_xref="GOA:Q7WG14"
FT                   /db_xref="InterPro:IPR001533"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WG14"
FT                   /protein_id="CAE34469.1"
FT                   /translation="MPAGGRGRGEFAMSTEFPMRIGAEVALPALQGWNAAAGRDAIEKR
FT                   YRFDNFNAAFGFMARVAMFAEKMDHHPEWRNVYNRVDVTLTTHDAGGVTELDVRMAQFM
FT                   DEAAGRLGATGLPARADQPRT"
FT   misc_feature    complement(190152..190427)
FT                   /note="HMMPfam hit to PF01329, DE Pterin 4 alpha
FT                   carbinolamine dehydratase, score 4.5e-34"
FT   CDS             complement(190502..191149)
FT                   /transl_table=11
FT                   /locus_tag="BB4107"
FT                   /product="putative outer membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3324"
FT                   /db_xref="GOA:Q7WG13"
FT                   /db_xref="InterPro:IPR008816"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG13"
FT                   /protein_id="CAE34470.1"
FT                   /translation="MQARTTIMRVAVVSAAALLISGCATPQQTNTAIGTGAGAAVGAGI
FT                   GALIGHGKGAAIGAGIGAVAGGLIGYNWSGVKQDVQQSGASSLGIDVVEMPDGSLKVNI
FT                   PSNVSFDTDKSQLKPALLPVLDSVARALNQHPELRTKVVGHTDSTGSAAHNQQLSVNRA
FT                   RAVTSYLGKQGVAQGRMTVEGRGANDPVGDNATAEGRAANRRVEVYLYAVKQ"
FT   misc_feature    complement(190538..190825)
FT                   /note="HMMPfam hit to PF00691, DE OmpA family, score
FT                   7.4e-28"
FT   misc_feature    complement(191081..191113)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(191263..192135)
FT                   /transl_table=11
FT                   /locus_tag="BB4108"
FT                   /product="carboxyvinyl-carboxyphosphonate phosphorylmutase"
FT                   /EC_number="2.7.8.23"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0718"
FT                   /db_xref="GOA:Q7WG12"
FT                   /db_xref="HSSP:1UJQ"
FT                   /db_xref="InterPro:IPR000918"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG12"
FT                   /protein_id="CAE34471.1"
FT                   /translation="MSNSTKRVLRERVAQRNGMLVAGAFNAMSARIVADQGFEAVYLTG
FT                   AGLTNMHYGAPDLGIIGLRDVADATSRIRDAVELPLIVDADTGFGNAVNVWHTVRVLER
FT                   AGADAIQLEDQVFPKRCGHFAGKSVAPLSEMVSKIKAAADARRDEDFLIIARTDARAVE
FT                   GFDAAIERARRFAEAGADILFVEAIVDQDEVGKLPQLLSQPLLVNIVVGGKTPPMPAAQ
FT                   LGRLGYSVVLYANATLQGAVLGMQRALGALRRDGKLDEDPALLAPFLERQRLVGKPLYD
FT                   ELEERYKDA"
FT   misc_feature    complement(192034..192135)
FT                   /note="Signal peptide predicted for BB4108 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.731) with cleavage site
FT                   probability 0.411 between residues 34 and 35"
FT   CDS             192476..192694
FT                   /transl_table=11
FT                   /locus_tag="BB4109"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0720"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG11"
FT                   /protein_id="CAE34472.1"
FT                   /translation="MSRKYIDCREFPSEMNCSVALSADSDAELLEAAVQHATTVHKHAD
FT                   TPELRAQLKTMFHEGTPPLAAQAGSRA"
FT   CDS             complement(192734..194113)
FT                   /transl_table=11
FT                   /locus_tag="BB4110"
FT                   /product="probable aminotransferase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0721"
FT                   /db_xref="GOA:Q7WG10"
FT                   /db_xref="HSSP:1DKA"
FT                   /db_xref="InterPro:IPR015421"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG10"
FT                   /protein_id="CAE34473.1"
FT                   /translation="MNDLATINDLHSVVEDDRNAIWHHMLQHDALQATAPWVVVEGKGT
FT                   RIRDASGKEYLDATAGGLWTVNVGYGRERIANAMRDQMLKLNYFAQSAGNVPGALFARQ
FT                   LVSKMPGMSRVYFSNSGSEANEKVFKMVRQISARHHAGRKYKILFRERDYHGSSIATLA
FT                   AAGQPERAAQYGPFPDGFVQVPHCLEYRKQWDVANYGERAADAIEEVILREGPETVGLL
FT                   CLEPITAGGGIIVPPEGYWRRVQEICRRHDVLLHIDEVVCGLGRTGKWFGYQHFDIEPD
FT                   FVTLAKGTASGYAAIACTVTHERIFEQFKDEPDDPLSFFRDVSTFGGCAGSAAAALENL
FT                   RILEEEGLVEHAAQVGDYLQACLRQLADKHAVIGDVRGKGLLQGVELVSDRAAKTPVSE
FT                   ADAKRVVAQCKAQGVLIGVITRALPGLNTTLCLAPPLILTRDEVDELCGAIDRALATVF
FT                   G"
FT   misc_feature    complement(192740..194038)
FT                   /note="HMMPfam hit to PF00202, DE Aminotransferase
FT                   class-III, score 1.1e-89"
FT   misc_feature    complement(193220..193252)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(194154..195551)
FT                   /transl_table=11
FT                   /locus_tag="BB4111"
FT                   /product="probable amidase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0722"
FT                   /db_xref="GOA:Q7WG09"
FT                   /db_xref="InterPro:IPR000120"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG09"
FT                   /protein_id="CAE34474.1"
FT                   /translation="MTSELWRLSACEIVAGVKSGAFSASEAVRAALDRMEAVNGRINAV
FT                   VDSDPQAALAAAARVDARIAAGEDPGPLAGVPVTVKVTHDQAGFATTMGIRKLKDHRAA
FT                   ANSPIVDNFERAGAIPIGRTNMPAFGLRWFTNGRLHGDTYNPFDRSLTPGGSSGGASAA
FT                   VASGIGAIAHGTDIAGSIRYPAYACGVHGLRPTLGRIPNYNASFPERGLGGQLMSVSGP
FT                   LARTVADIELSFAALAHADPRDPWWVPAPLAGPARPRRVALCLRPDGLEIDAGVADALL
FT                   DAAARLRDAGWEVAELDDIPPMRDAAVAQVTLWLGDEYPALLAEAQAEGDPGALAMLRG
FT                   QPQSAGVTLQSYCSALKARASYLRQWMLFFEDYPLMMLPVSARLPFANDLDTRSAADYD
FT                   SVWEAQMPQLGLAFMGLPCMSVATGMCGSAPVGIQLAAGRYREDLLFLAAEDIAARGMP
FT                   PVPVDPV"
FT   misc_feature    complement(194214..195476)
FT                   /note="HMMPfam hit to PF01425, DE Amidase, score 2.7e-62"
FT   misc_feature    complement(194997..195092)
FT                   /note="PS00571 Amidases signature."
FT   CDS             complement(195591..197243)
FT                   /transl_table=11
FT                   /locus_tag="BB4112"
FT                   /product="probable ABC transporter, ATP-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0723"
FT                   /db_xref="GOA:Q7WG08"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG08"
FT                   /protein_id="CAE34475.1"
FT                   /translation="MIFRKRDLQHRPVVLRIAGLSLVDGQPGAGSAILRDIDVDIRQGE
FT                   TVCLVGESGSGKSMTSLAVMGLLPKGHLRVTGGRIELDGQNLLDLGPAALRDLRAKRIS
FT                   MIFQEPMTALNPVMKVGPQIEEVLDSHTALPRREKKQRVLDIMEQVHLPDVARIYESYP
FT                   HQLSGGQRQRIMIAMALVLEPRLLIADEPTTALDVTTQNQVLKLISELQHKHDTAVLFI
FT                   THDMGVVAEIADRVYVMRLGEIVESAPVEQLLREPRQDYTRKLLKSVPSLIPRPGRAAP
FT                   QACATLQVQGLAKRYAMGGFPGRRREVQAAHDVAFSIQPGRTLGIVGESGSGKSTVARC
FT                   VMRLIEPSEGAIRVGDADIARLGPRQLKPFRKHLQIVFQDPYRSLNPRRTIGASLIEGP
FT                   VNFGQDRQAALAQAAELLELVGLPADALARYPHQFSGGQRQRIAIARAIAMRPDVLVAD
FT                   EAVSALDVSVQAQVLELLDTLQRKLDIAILFITHDLRVAAQICDEVMVMRHGRVVEHDT
FT                   AENVLARPAHAYTRALIEAAPGRDWDFANFRER"
FT   misc_feature    complement(195714..196283)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   7.2e-62"
FT   misc_feature    complement(195900..195944)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(196239..196262)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(196518..197114)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   2.1e-57"
FT   misc_feature    complement(196704..196748)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(197070..197093)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(197247..198131)
FT                   /transl_table=11
FT                   /locus_tag="BB4113"
FT                   /product="probable ABC transporter, permease protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0724"
FT                   /db_xref="GOA:Q7WG07"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG07"
FT                   /protein_id="CAE34476.1"
FT                   /translation="MTTLPQPASALQAVFRVTQLPAWCRFGWPPIAAALVLAVLVLATA
FT                   AAYLYIPHDPIAINPLMRLKPASADHWLGTDALGRDVFSRVMAGGQVSLLVGVAAAVIS
FT                   IAAGLCIGLVSGFFRVLDGVVMRIMDAVMSVPSILLAIALVALNGPSIWSVIIAITVPE
FT                   VPRVVRLVRSVVLSAREEPYVEAALALGTSMPGILWRHIMPNTLAPLMVQATYVCASAI
FT                   LTEAVLSFLGAGVSTEIPTWGNIMAEARMYFQIRPGLMLWPGLLLSLCILSINLLGDTA
FT                   RDMLDPRLKRRGE"
FT   misc_feature    complement(join(197298..197357,197415..197483,
FT                   197655..197723,197781..197849,197976..198044))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB4113 by TMHMM2.0 at aa 30-52, 95-117, 137-159, 217-239
FT                   and 259-278"
FT   misc_feature    complement(197388..197609)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 7.5e-09"
FT   misc_feature    complement(197520..197606)
FT                   /note="PS00402 Binding-protein-dependent transport systems
FT                   inner membrane comp. sign."
FT   CDS             complement(198131..199072)
FT                   /transl_table=11
FT                   /locus_tag="BB4114"
FT                   /product="probable ABC transporter, permease protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0725"
FT                   /db_xref="GOA:Q7WG06"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG06"
FT                   /protein_id="CAE34477.1"
FT                   /translation="MFGYILRRVLATIPVVVIVAVFVFLLLRLTPGDAAAIIAGDSATP
FT                   AQIENIRKSLGLTEPLTVQFRTWMTQLASGDLGTSIISRQPVTKLIGQRVGPTLQIATL
FT                   TIILSVLIAVPLGVLAAWRHRSWLDYAVMAFSVIGFSIPAFVVGYILMKIFAVDLRWLP
FT                   VQGFTSVFQDPQQFLRTAVLPCMTLATVFVALIARMTRASMLDVLGEDYIRTARAKGVK
FT                   ERIVLFRHALGNAAVPIVTIIGTGFALLIAGVVVTESVYNIPGIGRLTVDAVLARDYPV
FT                   IQAMILLTSALYVFINLLIDLSYTIFDPRIRY"
FT   misc_feature    complement(join(198152..198220,198311..198379,
FT                   198485..198544,198602..198670,198707..198775,
FT                   198992..199060))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB4114 by TMHMM2.0 at aa 5-27, 100-122, 135-157, 177-196,
FT                   232-254 and 285-307"
FT   misc_feature    complement(198248..198463)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 0.015"
FT   CDS             complement(199151..200770)
FT                   /transl_table=11
FT                   /locus_tag="BB4115"
FT                   /product="probable ABC transporter, periplasmic binding
FT                   protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0726"
FT                   /db_xref="GOA:Q7WG05"
FT                   /db_xref="InterPro:IPR000914"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG05"
FT                   /protein_id="CAE34478.1"
FT                   /translation="MFIARNAADPAVKIRAGARLAAVAAALCGLAATVPAAAQAPKTVT
FT                   AVMHSGLRVLDPIITTAHITRNHGYMIYDVLVSMDKDFNVRPQMADFSVSPDGLTYTFT
FT                   LRDNLWFHDGAPVTAADVVASLKRWGERDTGGQHIFDQTESLAATDARTITWKLSKPFG
FT                   PMLETLGKQSTVPPFIMPERVARTPSSEAITDYTGSGPFRFVLDEFSPGVKVAYAKFDK
FT                   YVPRNEPANWMAGGKVVKVDRVNWVTMPDAQTAVSALSSGEIDYLEQTPTDLLPILESN
FT                   ADVVLEVRDQLGYQALGRMNFKQPPFNDKRIRQAALKAMSQEPILAAMVGNPKYYQVCG
FT                   AVLGCGTPLASEAGAGALTGKGDVEGARALLKEAGYDGSPVVILQPTDVPILAAPPLVA
FT                   AQQLRAAGFKVDLQPMDWQTLVTRRTNKGAPSQGGWSMFFSYWMVPEVTTPLINATLNA
FT                   RGDEGFFGWAQDPELEAMRGEYITAGSPQAQLDVAKRIQARVMDEVTYLPLGQFQTVQG
FT                   RRANLVDIIASPVPVFWQMDKK"
FT   misc_feature    complement(199157..200719)
FT                   /note="HMMPfam hit to PF00496, DE Bacterial extracellular
FT                   solute-binding proteins, family 5, score 2e-15"
FT   misc_feature    complement(200657..200770)
FT                   /note="Signal peptide predicted for BB4115 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.895 between residues 38 and 39"
FT   CDS             200937..201752
FT                   /transl_table=11
FT                   /locus_tag="BB4116"
FT                   /product="probable transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0727"
FT                   /db_xref="GOA:Q7WG04"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG04"
FT                   /protein_id="CAE34479.1"
FT                   /translation="MRRSIVNSELGVRSPTEEELEDPLFVQAAARTLQVLSAFHRAVRP
FT                   MSLDEIAEASGVGRSSTQRILNTLRVLGYVERSDGGRGYVPGIRILDHALDYLRLNTLI
FT                   SRASPVLLDLRRNALERVDLSVFDDLRLVYASRLQSKRETFFATLVGHSVPTFCTAGGR
FT                   AILSHLPGAEVDDIIARSDRTPFTDKTITAPREIRKKVEQARVSGYAVTIEEVLVGEIG
FT                   IGVAVLGADGRPVGAIHIAGSLSEWTPEAFTARFAPLAVEAATAINRLS"
FT   misc_feature    201186..201746
FT                   /note="HMMPfam hit to PF01614, DE Bacterial transcriptional
FT                   regulator, score 2.7e-21"
FT   CDS             complement(201820..202389)
FT                   /transl_table=11
FT                   /locus_tag="BB4117"
FT                   /product="probable transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0728"
FT                   /db_xref="GOA:Q7WG03"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG03"
FT                   /protein_id="CAE34480.1"
FT                   /translation="MVRPRTIDRERLLDIAESIISEAGAVTISFGGLAEAAGLSKASVQ
FT                   SVFGTREAMMEALLERWLRKEQRAYQKKIGPQSSLRERVRRHVKITGKESSEANSRLAA
FT                   VLTALVGSDATEGVMAKWYASRVGKFSAETQEERLLRIAFLAAEGAFFMRHVAGFPMSD
FT                   RLWRELFHDLLDFVAEPVGGAARSAA"
FT   CDS             202946..204043
FT                   /transl_table=11
FT                   /gene="nspC"
FT                   /locus_tag="BB4118"
FT                   /product="carboxynorspermidine decarboxylase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0731"
FT                   /db_xref="GOA:Q7WG02"
FT                   /db_xref="InterPro:IPR005730"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG02"
FT                   /protein_id="CAE34481.1"
FT                   /translation="MLKTPYYLIDKRALLQNLEVIRRIRERSGAKVLLALKCFATWSVF
FT                   DLMREYMDGTTSSSLFEVRLGREKFGGETHAYSVAYAEDDIDDVVACADKIIFNSLSQL
FT                   ERYAPRASAIPRGLRLNPGISVSGYDLANPARPFSRLGETDLDRIAQAMPMIDGFMVHN
FT                   NCENRDFTRFDALLTELEHRYGHLLGQINWISLGGGIHFTEPGYALDAFCDRLRRFSEQ
FT                   YGVQVYLEPGEAAITNTATLEVTVLDVMRNEKNLAIVDAATEAHMLDLLIYRMSARVQP
FT                   DQGPHRYVIYGNSCLAGDVFGEFSFESPLQPGSRISIQDAAGYTMVKKNWFNGVRMPAI
FT                   AIRELDGEIRLVREFGYQDYVDSLS"
FT   CDS             204077..205342
FT                   /transl_table=11
FT                   /locus_tag="BB4119"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0732"
FT                   /db_xref="GOA:Q7WG01"
FT                   /db_xref="InterPro:IPR005097"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG01"
FT                   /protein_id="CAE34482.1"
FT                   /translation="MKRNVLIIGAGGVAHVVAHKCAQHNATLGEIHIASRTLDKAQGIV
FT                   RSVHAMGNLQTNGVVKAHGLNALDIKATAALIRATNARIVIQAGTSFLNMAVLAACIET
FT                   GAAYIDTAIHEDPAKTCEAPPWYANYEWKQAQACADAGVTAILGAGFDPGVVNAYAKLA
FT                   VDELFDEVSSIDIIDTNAGSHGKYFATNFDPEINFREFTGSVWSWQEGRWCENRMFEEQ
FT                   RAWDLPVVGRQTTYLTGHDEIHSLSTHLNVPNIRFWMGFSDHYINVFTVLNSLGLLSEQ
FT                   PVRTAEGQQVVPLKVVKAVLPDPASLARTYKGKTCIGDLVRGVKDGRPHEVLIYNVCDH
FT                   EQAYREVGSQAISYTAGVPATAAALLIADGVWDNRKMNNIEQLAPRPWLQLLETMGLPS
FT                   RIRDAHGDRALLSPCGKLLKAA"
FT   misc_feature    204077..204136
FT                   /note="Signal peptide predicted for BB4119 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.648) with cleavage site
FT                   probability 0.520 between residues 20 and 21"
FT   misc_feature    204998..205021
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(205398..205886)
FT                   /transl_table=11
FT                   /locus_tag="BB4120"
FT                   /product="ECF-family sigma factor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0738"
FT                   /db_xref="GOA:Q7WG00"
FT                   /db_xref="InterPro:IPR007627"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WG00"
FT                   /protein_id="CAE34483.1"
FT                   /translation="MEQYYTELLRFLARKLGNSHDAADVAQEAYARVLDRNGSCAIVQP
FT                   RAFLFRAALNLCTDLYRNRRGSQVMPLDAAAEAVRCEAPLQDERLYRRQQLARLERALQ
FT                   ELPPACRQAFLMRQVEGMSHDEIANSLGISVDMVHKHLTRALRHCRSRMRAWEHGADA"
FT   misc_feature    complement(205695..205859)
FT                   /note="HMMPfam hit to PF00776, , score 0.00014"
FT   CDS             206018..206989
FT                   /transl_table=11
FT                   /locus_tag="BB4121"
FT                   /product="putative inner membrane sensor for iron
FT                   transport"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0737"
FT                   /db_xref="InterPro:IPR012373"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ9"
FT                   /protein_id="CAE34484.1"
FT                   /translation="MAVPPSKQDDLLTEQAVQWCVRIHDACCSEQDRAALQAWLEADPR
FT                   HAREYEAVRDIWTLAQDLPAHEAPAKACAPRRRPYPAARRALGACALGLACWAAGWWFA
FT                   VLPSSYHRYASDARVATVTLGDGTEVDMNIDTAMVYRNYRDARRVRLSDGEAYFRVFHD
FT                   ASHPFVVEAGAGTITVTGTAFNVWKSGDNVVVTLVEGRVDLRASATGKTVSLQPLTQAR
FT                   YAGRGEPVTRAVDGAQSAAWRHGKLVLDNTTLRDAIMQINRYLPAEARYTAVDPAIAGL
FT                   RLGGTYDVRNVGELARALPDILPVRTVRKADGSLALVPNPPR"
FT   misc_feature    206273..206305
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    206273..206332
FT                   /note="1 probable transmembrane helix predicted for BB4121
FT                   by TMHMM2.0 at aa 86-105"
FT   CDS             207109..209553
FT                   /transl_table=11
FT                   /gene="bfrF"
FT                   /locus_tag="BB4122"
FT                   /product="putative ferric siderophore receptor"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0736"
FT                   /db_xref="GOA:Q7WFZ8"
FT                   /db_xref="HSSP:1BY5"
FT                   /db_xref="InterPro:IPR010105"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ8"
FT                   /protein_id="CAE34485.1"
FT                   /translation="MVITFNLFSVKHSMRARPSAATRALHSSSRPRRLIPALLGALACL
FT                   GTGVQAAPIDVDIPPQNLAQALHQLGRQANLQVLYSQDLVDGQRSPAVQGRMEPAEALE
FT                   RLLKGRNIRYSIQHNTVTLTPMPLTATLPAISVVGALPDSDTYVATGTTAGTKTDTPLI
FT                   EIPQSISVVTAAQIREQNPQTLGDAVRYTPGIVVQEGFNRTDDPFIIRGFDVRTNPGVM
FT                   FRDGLKIPLPHYSAMSEPYALERIEVVKGPASVLYGQASPGGIVNVVSKRPTDSPLREL
FT                   QLSGGSHSNRQLAGDFGGRIDDEGRLTYRLTGLARNADTMIDHVPDDRYYLAPALTWRI
FT                   SPDTSLTLLASYMKNKTINNAGYPLEGTVKYNPNGRIPRHRFTGEPDWSKWDQEVANVG
FT                   YQFAHRFNDTWQFKQNLGYAQSRNRVNHAYWWTWVPGSDFSTAERGAYRRDDDAHGVSI
FT                   DNQFEATWQSGRFRHNTLFGLDYTETSFTRKQYAGYNNLAPIDFFDPAYGSDVLLPAKP
FT                   DTYTNEKRSQLGLYLQDQIKFDDKLVVVLSGRYDNADGSTLNKLSGVNTRTGDNAFTWR
FT                   TGLLYLADNGLAPYISYSTSFQPQAGTTSPARGTTPFDPTKGKQWEAGVKYQPNGSNSF
FT                   ITASVFELTRTNVPTTDPANPVYSVQEGEVRSRGLELSATANLASGWNLIAAYTYTDAE
FT                   ITKSNSNTLGNTPEAVPRNMASLWSDYTVPSGALAGLNIGAGVRYMGSTYNNTNAAKVG
FT                   DYTVFDAAVRYDFGARSPSLKGWTADLTVRNLFDKDYVASCTYACFYGEGRTVLGRVTY
FT                   KW"
FT   misc_feature    207109..207261
FT                   /note="Signal peptide predicted for BB4122 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 51 and 52"
FT   misc_feature    207208..207240
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    209221..209547
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00593, DE TonB dependent receptor
FT                   C-terminal region, score 1.7e-28"
FT   CDS             complement(209569..210159)
FT                   /transl_table=11
FT                   /locus_tag="BB4123"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP0735"
FT                   /db_xref="InterPro:IPR007372"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ7"
FT                   /protein_id="CAE34486.1"
FT                   /translation="MKKNYPAYFAATLLALAGLSAQAAPVDYQIDPEHTEIVVTWDHLG
FT                   FSKPTAHAGGVTGVVRYDAASPADSAVDLRIPVSKLTSHVPKLDGMLQGVQFFEAARYP
FT                   DIRFKSTSVTDRGDGRLQIDGILRIKGIDKPVVLQARRNGQGMHPMAQRPAIGFDATTT
FT                   LKRSDFGVDAFAPDVSDEVQLRITIEAVAEAAR"
FT   misc_feature    complement(210091..210159)
FT                   /note="Signal peptide predicted for BB4123 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 23 and 24"
FT   CDS             complement(210249..211211)
FT                   /transl_table=11
FT                   /locus_tag="BB4124"
FT                   /product="putative enzyme-regulator fusion protein"
FT                   /db_xref="GOA:Q7WFZ6"
FT                   /db_xref="InterPro:IPR016181"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ6"
FT                   /protein_id="CAE34487.1"
FT                   /translation="MAVAMKGFHSLQPNVVKMNKPFISLCPEITRAHALTLMDWLEDEH
FT                   VTRHLSDSRHVSRFIEQVIDRVQLPVLTHLFNQGGRFFMAYDRHDVPVGFVRLVKTGSD
FT                   CEIVLVIGNRDNWGRKLGASAIREGMKLAFFEMRAARLIAKVHPDNERSLNAFLRCGFV
FT                   LESETPTLKSFSMTVERYLRFLRESAAGEPSGIQITEIDQARLRSLLELEQGPALAELE
FT                   HEVERAVVVDPRQVAGNVVTMNSRALLNVDDEQVEVALVYPDDADDSAGKLSVFSDFGT
FT                   AILGYQEGDAVDWRISDRTRRIWIEKVLYQPEAAGDFHL"
FT   misc_feature    complement(210723..210962)
FT                   /note="HMMPfam hit to PF00583, DE Acetyltransferase (GNAT)
FT                   family, score 7.3e-09"
FT   CDS             211446..212762
FT                   /transl_table=11
FT                   /locus_tag="BB4125"
FT                   /product="putative ring-hydroxylating dioxygenase large
FT                   subunit"
FT                   /db_xref="GOA:Q7WFZ5"
FT                   /db_xref="InterPro:IPR015881"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ5"
FT                   /protein_id="CAE34488.1"
FT                   /translation="MTSYTAAGLGELVQRDGALVNGRIYTDPEIFGLEMERIFSKVWVY
FT                   VGHESQVANPGDYMTGYLAQQPIILTRDRAGQIHVLFNRCTHRGAKIVNRERGNERLLT
FT                   CMYHGWAFGHDGELRGIPLKKDFPAEAVEPCKASLARPPRVDAYRGFIFASLNPDVEPL
FT                   RDYLGAAASGIDEIVDRAPAGTIRLSAGCHRYIYEGNWKLQTDNLGDMYHPVACHSSTV
FT                   DEDGKQFKRRPGDEGGRAAFLGADGEPIVIQTGVRGFLRGHSSEASLFGANDIVKEETR
FT                   QRGGIIDEYRSLLIEQHGVEKTDEILKNRRHSMTLFPNLDVLMVQTSVRVVIPLAYNRT
FT                   EVRIYPVHLDGAPDELNRQIIKFLNITHSAASFIQTDDLEAFKRQQEGLAARSPQWLIV
FT                   ARGQGSEIDEGNGAYFGPRASEVGQRMRHQYWRELMMAE"
FT   misc_feature    211569..211883
FT                   /note="HMMPfam hit to PF00355, DE Rieske [2Fe-2S] domain,
FT                   score 1.2e-27"
FT   misc_feature    211698..211769
FT                   /note="PS00570 Bacterial ring hydroxylating dioxygenases
FT                   alpha-subunit signature."
FT   misc_feature    211890..211913
FT                   /note="PS00030 Eukaryotic putative RNA-binding region RNP-1
FT                   signature."
FT   misc_feature    211932..212756
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF00848, DE Ring hydroxylating alpha
FT                   subunit (catalytic domain), score 2.5e-10"
FT   CDS             212768..213289
FT                   /transl_table=11
FT                   /locus_tag="BB4126"
FT                   /product="putative ring-hydroxylating dioxygenase small
FT                   subunit"
FT                   /db_xref="GOA:Q7WFZ4"
FT                   /db_xref="InterPro:IPR000391"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ4"
FT                   /protein_id="CAE34489.1"
FT                   /translation="MLKKIDDSESLLDTAALAPLQRFVERECRLLDEQRFEEWLALYLP
FT                   EATYWAPATRDNPDPDSQVSLFWDDKETMQTRVQRLLHPEIHSQIPASVTVRLTSNFRA
FT                   AVAPGGEKDAYQVECRFIMVEDRLGSPRQQFAGTFNYLLVQNGAAFRIRQKRVDLTNCD
FT                   HAFHTLTQPF"
FT   misc_feature    212843..213268
FT                   /note="HMMPfam hit to PF00866, DE Ring hydroxylating beta
FT                   subunit, score 1.3e-30"
FT   CDS             complement(213418..214392)
FT                   /transl_table=11
FT                   /locus_tag="BB4127"
FT                   /product="putative LysR-family transcriptional regulator"
FT                   /db_xref="GOA:Q7WFZ3"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ3"
FT                   /protein_id="CAE34490.1"
FT                   /translation="MSLPSLTALRTFEAAARYRSVKLAAAELHVTPTAVSHQIQQLEDL
FT                   LGVKLFERTGRGLVLTDAAVSCLPYLQQGFESLKVGVDKLRKHRGPDIITVNTSPSFAS
FT                   LWLFPRLHRFSLLYPDIDVRVTTRLRQAAQLRQEQQSGVNNVQDWVQEADLVIAYGNGQ
FT                   FGGFEHEELIPLYIAPMCSPALLPKGEKQAMGSRLLELPWLHDDRGTLYGSASFWQRWL
FT                   AAAGLADGKPAKEMHFTHALLALSAAADQLGVVVSTPVLAESLLRDGILYLPFDEQVRI
FT                   DRSYYLVKDASTGNDSRLTIFKEWLRQEAALSNAKGTSAQRLA"
FT   misc_feature    complement(213460..214134)
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 2.1e-16"
FT   misc_feature    complement(214198..214377)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.8e-26"
FT   misc_feature    complement(214243..214335)
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT   CDS             214658..215677
FT                   /transl_table=11
FT                   /locus_tag="BB4128"
FT                   /product="putative exported protein"
FT                   /db_xref="GOA:Q7WFZ2"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ2"
FT                   /protein_id="CAE34491.1"
FT                   /translation="MSRKKSPRGGFRSRLRRAGGTLASIIVATACTLPVTSPARAEYPN
FT                   RPVTLVVPYSPGGGVDAVARVFARSLSDKFKQSVVVENRPGAGAMIGIDYANRARPDGY
FT                   TLLIVDPAFVINPSLQPQVSYKVSDLKPVGILTGSPLVLVSAKNSRFDSLAGMLKISKV
FT                   EGKGVTYATPGIGTTPHMAGELLRETQGANLTQVPYKGSGPATADVISGQVDVGFMSIT
FT                   AAATFLKENRLQGLATSGTARSTVLPDLPTIAEVTQSDYSVLFWTGLFISAKVPDEIQQ
FT                   SLAAAVQAVYADPAYAKGLAGLGETPVGTKLADPGQYVNAEYSKWAALIAKANLKQKD"
FT   misc_feature    214658..214780
FT                   /note="Signal peptide predicted for BB4128 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.738 between residues 41 and 42"
FT   misc_feature    214718..214750
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   misc_feature    214844..215662
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 1.4e-80"
FT   CDS             215699..216514
FT                   /transl_table=11
FT                   /locus_tag="BB4129"
FT                   /product="putative hydrolase"
FT                   /db_xref="GOA:Q7WFZ1"
FT                   /db_xref="HSSP:1IUP"
FT                   /db_xref="InterPro:IPR000073"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ1"
FT                   /protein_id="CAE34492.1"
FT                   /translation="MDRKQTTFNGLRVAYWEGGSGEPLLLIHGSGPGASTLGNWRLVLD
FT                   ELARDFHVIAPDLIGFGQSDRKPEAPYFDLDLWAVQAKAALDLFDSARINVLGHSLSGY
FT                   LALRLASEDARVRAVMTTGAMGVPFPLNDDLERTWSFPPTREAIVRAGESLVYDRDVLT
FT                   EAYVQGRVDVLHQGDYGAYFSAMFAGDKQQYIDAAVLPAQAWGRIQCPVMLVHGRNDLP
FT                   IPFERSALEIARRLPHADLVALAHCGHSPALEHPGKLAALARLFFHPAP"
FT   misc_feature    215849..216499
FT                   /note="HMMPfam hit to PF00561, DE alpha/beta hydrolase
FT                   fold, score 1.7e-21"
FT   misc_feature    216137..216190
FT                   /note="PS01037 Bacterial extracellular solute-binding
FT                   proteins, family 1 signature."
FT   CDS             216559..216975
FT                   /transl_table=11
FT                   /locus_tag="BB4130"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="HSSP:1JD1"
FT                   /db_xref="InterPro:IPR006175"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFZ0"
FT                   /protein_id="CAE34493.1"
FT                   /translation="MSTELQYMNPEGACPAQGLYSHATRVPAGGNTYFIAGQLSVAPDG
FT                   SVAGKGSFETQFRQVFKNLADVLHGLGLSHKHLVKFTTFLVHSQDIETFMKLRAEYFPT
FT                   IFPGSLPPNTLLIVDRLVKEEFLLEVEAIAYQPA"
FT   misc_feature    216586..216966
FT                   /note="HMMPfam hit to PF01042, DE Endoribonuclease L-PSP,
FT                   score 5.4e-19"
FT   CDS             216988..218022
FT                   /transl_table=11
FT                   /locus_tag="BB4131"
FT                   /product="putative dioxygenase"
FT                   /db_xref="GOA:Q7WFY9"
FT                   /db_xref="InterPro:IPR004183"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY9"
FT                   /protein_id="CAE34494.1"
FT                   /translation="MAKIVAGIGMSHAPGALGWPDAPSASVRRRLLQAADRLGRSLDAA
FT                   RPDVIIAFLDDHFENHFRSLMPTVGIGVADSHPGPATQWLEALRLTRQERFGGAPEIAE
FT                   RLLRSLVADGYDVARMGEIEYGNNLMVPWKLMAPRSAPAIIPVFTNVFSPPVMPYRRAY
FT                   AFGAALRNAAEALDADLRVAFMATGGMSHWPPFWNDSSPEADAFLARMKAFQTHGKSVL
FT                   EKDPHLLRDLAAYEIEMAERNQWPLNSPHPLVNEAWDRQMLDALARGDVEFLCGLQYED
FT                   VKRDGGHGGQEIINWIELMGAMKGAPATLLEYEAVTEWICGMAYMDYGVAQAWPVNPLI
FT                   KEQE"
FT   misc_feature    217021..217971
FT                   /note="HMMPfam hit to PF02900, DE Catalytic LigB subunit of
FT                   aromatic ring-opening dioxygenase, score 7.8e-29"
FT   misc_feature    217624..217647
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             218019..218900
FT                   /transl_table=11
FT                   /locus_tag="BB4132"
FT                   /product="putative enzyme"
FT                   /db_xref="GOA:Q7WFY8"
FT                   /db_xref="HSSP:1GTT"
FT                   /db_xref="InterPro:IPR002529"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY8"
FT                   /protein_id="CAE34495.1"
FT                   /translation="MKFASLDYQGKAQVAILDTEAGVFWPLSGLLRDEGDLVELISAWD
FT                   SVHQRIAPSGAGIALDRATILAPISSPRRNIFCVGKNYHEHAAEFQRSGFDSSAKDGEH
FT                   APEAPVVFTKPASAIVAPGAVIPRHAQVTQQLDYEAELAVVIGKAGQGIKKADAMSHVF
FT                   GYTIINDVTARDLQKLHRQWFIGKSLDGFCPMGPYIVTADEVDGQALDVRCWINDELRQ
FT                   NANTRQLIFDIPTLIETLSAGMTLQPGDIIATGTPAGVGIGFTPPRFLQSGDRVRIEIA
FT                   GLGVLENTVGNE"
FT   misc_feature    218319..218813
FT                   /note="HMMPfam hit to PF01557, DE Fumarylacetoacetate (FAA)
FT                   hydrolase family, score 8.6e-83"
FT   CDS             219194..219487
FT                   /transl_table=11
FT                   /locus_tag="BB4133"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY7"
FT                   /protein_id="CAE34496.1"
FT                   /translation="MKMLPASCRRRFLKEIEGLFVPVLLLAREMKLLKLRHIALDGTKI
FT                   KANASKYKALSWGHANRIAGQLREEVRGKEPQPPPSALALIIEIKSKVQYIP"
FT   CDS             219517..220488
FT                   /transl_table=11
FT                   /locus_tag="BB4134"
FT                   /product="putative secreted protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2847"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY6"
FT                   /protein_id="CAE34497.1"
FT                   /translation="MTRRQQRKSRMTPRLLAVAVSGLCVSGCETTPGGSSAAPDAYASV
FT                   PSASGQLRSLGPVPDPAAALQARALRDINHLLTQGEALFAPGQGVSCPVSYPLEAVNRR
FT                   LRANGSPEEAPPLVYALNVVSGACPSQGSSAEDFKFEGPVDYILVTHKRKQTTGDDHDD
FT                   ILLQERRVGVYAGGMPVGEHKEFGRALHKHYRRLFSGEIMEMRAAGRDAGKPMYSVYYQ
FT                   SYGGGGAPELAGTPVGGTVDFFSPDWLAQPLKTTITVAAYPDASRRVVTIYEDGEPVRR
FT                   FRARKMDGQYVLHGWYEYLKPRGNSVCYQHAVQIHATECADL"
FT   misc_feature    219517..219627
FT                   /note="Signal peptide predicted for BB4134 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.888 between residues 37 and 38"
FT   CDS             220497..221672
FT                   /transl_table=11
FT                   /locus_tag="BB4135"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2846"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY5"
FT                   /protein_id="CAE34498.1"
FT                   /translation="MTMQCKNKISAGLILLACGVLAGCMGDHDPYAGYAPAERAKLEAD
FT                   DNARLAAFHQQFTQEKANNAALETVADEMLAYRMRSGDTSLFEGVRVRGDFDRFDGQMS
FT                   LVRDAYTHKLALTYHKGTYHSSPASTYLGPASGLNQAPAGFNGQYQGDFNMFLQAPSEL
FT                   DQELELTDPAIRTGSYVMIGTFVRHDGVREPGIYVADFANGNHALKFTRATPAYLAQME
FT                   QRYADQVASFRESERRRRQAEASGGGDGFGALLALGLGGLILSSADIPGADVAQIGAAL
FT                   FQDVMTDGQTQALAAIARSGRGAYAPSTLGGAAVASAGNTPARGGAERTQQYRVTCPAG
FT                   HSSTVPIPYKSASCLAAKQEMARVYACNLVGEFEQVARQCAQGCGSPQCVE"
FT   misc_feature    220497..220565
FT                   /note="Signal peptide predicted for BB4135 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.931) with cleavage site
FT                   probability 0.369 between residues 23 and 24"
FT   misc_feature    220536..220568
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             221669..223312
FT                   /transl_table=11
FT                   /locus_tag="BB4136"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2843"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY4"
FT                   /protein_id="CAE34499.1"
FT                   /translation="MNIIHAARRLALVALASLALSGCETLTNMATSVRDAFAPAPQSDA
FT                   AVEAPPAPGTSVADSSAGPADESAEDPLAPGFLHFVLPDSPWGTEGWRFEALAAKSTAG
FT                   FIPLQSDARLGYHLKLTLWPDQYQVRVSLRGDTRLSQWVTVEAGRHTVIHVDLGVVTDD
FT                   VLVLHGEDALKRLAESLALSRDLGLAQTFSPFRLMFDGGLEGRWHGPRSDGQARGTGRL
FT                   ELFRAQSRVARLENAQALPGARSGFEGVPVFDDGRQVAGRWQGRSLAEGSVMRFPDGRV
FT                   FQGGYTGTEPDTGKLTLTDGRTWTGKVSNGQPTGNGDLTLPDGTVVHDVPGIDESAFDG
FT                   EYECTAPSGRAVNCAYFEGERQASLAQYKRRDKARQAATAREVAQARELAEVARQTQPA
FT                   SRTDPMSKQGLAAAVAVAQENQARHQDAPAVDGKLDRPQLSNAAPAASGCARVEGRFST
FT                   TTGLSKVSFDAGGRGHFWQKTYGGARAYTFDVDFRWTSTDSKMTFDYDEAVYRDAAGNE
FT                   MQRTRMPGGTVACSYDGRELSIGGVSYFRL"
FT   misc_feature    221669..221803
FT                   /note="Signal peptide predicted for BB4136 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.993) with cleavage site
FT                   probability 0.221 between residues 45 and 46"
FT   misc_feature    221705..221737
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(223351..223572)
FT                   /transl_table=11
FT                   /locus_tag="BB4137"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2842"
FT                   /note="Weakly similar to Lactococcus lactis hypothetical
FT                   9.2 kDa protein SWALL:Q9JRK4 (EMBL:AF178424) (77 aa) fasta
FT                   scores: E(): 4, 27.11% id in 59 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY3"
FT                   /protein_id="CAE34500.1"
FT                   /translation="MPEHGTRTEPGGSDESKSALVLDIFQGKTIVAEASPQYDLSPSEV
FT                   EQWVDDGKRGMENALRANPQDVSEQYEL"
FT   misc_feature    223754..232189
FT                   /note="phage-related region"
FT   CDS             223915..225189
FT                   /transl_table=11
FT                   /locus_tag="BB4138"
FT                   /product="phage-related integrase"
FT                   /note="Similar to Xylella fastidiosa phage-related
FT                   integrase xf0631 SWALL:Q9PFM6 (EMBL:AE003908) (413 aa)
FT                   fasta scores: E(): 2e-54, 42.41% id in 422 aa, and to
FT                   Xanthomonas axonopodis phage-related integrase int or
FT                   xac2222 SWALL:AAM37075 (EMBL:AE011860) (399 aa) fasta
FT                   scores: E(): 5.2e-07, 27.27% id in 396 aa"
FT                   /db_xref="GOA:Q7WFY2"
FT                   /db_xref="InterPro:IPR002104"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY2"
FT                   /protein_id="CAE34501.1"
FT                   /translation="MPTVKKLTKQVVDGLPTPATGQAFHWCSVTPGFAVRVTASGAKSY
FT                   IVQGRVNSKTCRYTIGPCELLGTDEARKRALARLLEMHDGMNPQVERKRRQAQGVTLRE
FT                   VMEDYVENKRTKHGTLRDSSQADIKRCVTQHLADWADKPVASITREACVKRFRELSATA
FT                   PTTANQVFRNLRALCNWARETNVAPDGSYPILPINPVVQAFKSVTWNKEVTREEFVPLA
FT                   KVGAVWNMLAERSNAQIYTTADVTAAHLVMFLILTGARIGEGSALHWKDVRLDDEVPSF
FT                   TFTQTKNHNEVTIPLSTQLHALLAARYSARRPDEEYVFPSRTGTREPHMQDARGTMQRV
FT                   SKIAGLHLHNHDLRRTFLAIAIECGVEMWKAEILTNHLPQTVTLKHYTQTRDLRYLQAD
FT                   TQRVADWITKQAQVASGQNVVALRA"
FT   misc_feature    224605..225105
FT                   /note="HMMPfam hit to PF00589, DE Phage integrase family,
FT                   score 3.9e-08"
FT   CDS             225446..225688
FT                   /transl_table=11
FT                   /locus_tag="BB4139"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Salmonella enterica subsp. enterica
FT                   serovar Typhimurium excisionase xiS SWALL:Q9FDI1
FT                   (EMBL:AF261825) (122 aa) fasta scores: E(): 0.56, 36.14% id
FT                   in 83 aa, and to Rhizobium loti hypothetical protein
FT                   Msr9739 msr9739 SWALL:Q98NU3 (EMBL:AP003017) (93 aa) fasta
FT                   scores: E(): 0.00042, 43.54% id in 62 aa"
FT                   /db_xref="GOA:Q7WFY1"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY1"
FT                   /protein_id="CAE34502.1"
FT                   /translation="MELLAMTTLSDSPVSLNPADRLKTPEAAAFLGLEPITLRCWRCAK
FT                   TGPAYYRNGKRILYEVRDLQKWLEARRVTHEEVPL"
FT   CDS             225770..227872
FT                   /transl_table=11
FT                   /locus_tag="BB4140"
FT                   /product="phage-related hypothetical protein"
FT                   /note="Weakly similar to Bacteriophage APSE-1 complete
FT                   genome SWALL:Q9T1U5 (EMBL:AF157835) (752 aa) fasta scores:
FT                   E(): 0.0002, 30.76% id in 221 aa, and to Synechococcus RepA
FT                   protein repA SWALL:Q53576 (EMBL:S89470) (876 aa) fasta
FT                   scores: E(): 0.007, 25.64% id in 273 aa"
FT                   /db_xref="InterPro:IPR014819"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFY0"
FT                   /protein_id="CAE34503.1"
FT                   /translation="MQHEHSAGQPAPQGVDMPHAAHQQPAQAPQQPGQGVGMGNPPNAP
FT                   QAGAWAHMRSARRWLIASLPNKVPHYINGSTRGETDTPDDWAHLASYEDAKATLSRLGA
FT                   GWILGFALGPDESGGHWQGIDFDDIPQNLLSDLANDVHGYVEVSPSRKGAHAIGYGRHF
FT                   ATLGHNGTGIEAYAKGRYFTVTEQRIRDGGLICLAAYIEETLAPRHGARRATNAGMTEV
FT                   VPVNAKTVTELRSALLYMRAEDYHLWVNMGLALRELGETGRGLWMEWSATSEKFDSKDA
FT                   AKKWNSFKPTGTSYQAVFAEAARHGWVNPGRSDAQLTGRRVQTQLKTSHKIKLEFAMSS
FT                   DTETAKVSYLVDPFLPCKCVVGFFGRGGTAKSSFLATMAAMISQRASTLWVSAEELTDW
FT                   IKARHIKTGGAPGTLQVFRGIETDEHSGQHIQVFGVYEHLDAALTMSNVAARDAGMPAV
FT                   RLVVLDTAVALTIWPSGQGPNDDASVKRLLAYMQALAEKHDVTIAFIGHNNKRSSQNTE
FT                   HFEDMVAGAGAWVTSPRVAFVHARDRREENSYVMRLAKPQLTPRFLVTYKTEPVHTLAQ
FT                   REDAPASVLCRVALGDEYIWGEDESASVFDAATGKDTEEDSGHVLEQRATTVQQVIDAL
FT                   VQMVHMTNAGQDVTRDMVHSALHRIVNGRRWKDVDDRLYMAQFQYRIAIVRGPNNQVLY
FT                   RKMGPA"
FT   CDS             227900..228247
FT                   /transl_table=11
FT                   /locus_tag="BB4141"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX9"
FT                   /protein_id="CAE34504.1"
FT                   /translation="MLATAKLQNYKRVLTVFWFCSFALLYTGACAAKPAGPRHPSRPAS
FT                   PARARTLPTAIAGRWGDQPGLPAQRACPGPWACCNGPYGTRMQFISMSVVRPQLSPASR
FT                   SIVELNISTVN"
FT   misc_feature    227900..227995
FT                   /note="Signal peptide predicted for BB4141 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.994) with cleavage site
FT                   probability 0.780 between residues 32 and 33"
FT   CDS             complement(228212..228601)
FT                   /transl_table=11
FT                   /locus_tag="BB4142"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX8"
FT                   /protein_id="CAE34505.1"
FT                   /translation="MGQENFHASVQYGDLKGTAAADRHDHRDMSNYLKDKGLIKDEEHL
FT                   IGIQMYSGEVHKPTQEDPVMVIALVATGDGYESLKHAVESGEPLKVRKIRFEMGLNEFF
FT                   GLFKRFEICISSHGLIDGRDIQFDD"
FT   CDS             228823..229533
FT                   /transl_table=11
FT                   /locus_tag="BB4143"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Xylella fastidiosa hypothetical protein
FT                   Xf0635 xf0635 SWALL:Q9PFM2 (EMBL:AE003908) (240 aa) fasta
FT                   scores: E(): 9.4e-44, 53.41% id in 234 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX7"
FT                   /protein_id="CAE34506.1"
FT                   /translation="MPATIDPRISPSLHEETVRSLDGYGEDTAPLLAPVVEAFSDAYVT
FT                   LGKLHDARDAVKKNPAWTEGQQVLNVADAAYKQQQRLNRKMDGLVATLDKQVAHFEAEL
FT                   STPLDSKASVNVAGEIRRYARDLPTEKRHQFLQQAIDEGDALTVSACLGAPPYLSGLDG
FT                   NAQKTWTRMWHERATPELARKLKAVRNAKAMVEERAPLIVGQVEKAMGADWGKVSELRK
FT                   GNDKALAALKFDAQ"
FT   CDS             229554..230063
FT                   /transl_table=11
FT                   /locus_tag="BB4144"
FT                   /product="phage-related conserved hypothetical protein"
FT                   /note="Similar to Xylella fastidiosa hypothetical protein
FT                   Xf0636 xf0636 SWALL:Q9PFM1 (EMBL:AE003908) (155 aa) fasta
FT                   scores: E(): 2e-16, 40.64% id in 155 aa"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX6"
FT                   /protein_id="CAE34507.1"
FT                   /translation="MALDDIKGFLHMAELAQTELMPGTQPDASAVAEHGGNPNWKKGMR
FT                   SPNPAGRPRGIIDKRTRVTQALMDDAPAIARVIIDAALEGDVQAAGLVLSRVAPALRSQ
FT                   TERVEFAFDASAPVAQQVEQVLQAIADGKVAADVGKQIIEAIGALSAVRAADELERRLQ
FT                   ALEDKQ"
FT   CDS             230060..230440
FT                   /transl_table=11
FT                   /locus_tag="BB4145"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX5"
FT                   /protein_id="CAE34508.1"
FT                   /translation="MSVIRTKQNLVAALEPLPGDSVVMTRIGTARTFRNIDQYDTAVQN
FT                   AVAMADHMQAPVDVVPMDVAEFVQVKTGMALKDYLAGLPDAVREELRLMCIDSCMEILH
FT                   DCPDAAIRVQAAAVLVALGVVQ"
FT   CDS             230454..230693
FT                   /transl_table=11
FT                   /locus_tag="BB4146"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX4"
FT                   /protein_id="CAE34509.1"
FT                   /translation="MAKGVTRVGDMFGNGTAAVQEDGLDDENRMPNYGITAEDRQRIRK
FT                   RHFEVMQDRQAASGGPLTLALTLARALRQQQGEG"
FT   CDS             230698..230895
FT                   /transl_table=11
FT                   /locus_tag="BB4147"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX3"
FT                   /protein_id="CAE34510.1"
FT                   /translation="MGNARAMLARVRRLERGRVSAVHRLLGCPQAFHAHVQAGMAAGTY
FT                   DKRDMPIVASTIERWLHDGL"
FT   CDS             complement(231099..231407)
FT                   /transl_table=11
FT                   /locus_tag="BB4148"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX2"
FT                   /protein_id="CAE34511.1"
FT                   /translation="MIKVETACNIGEFLVLHTGYRGDSVTTRIVDTFWFPDKEVDAGDL
FT                   VVLYTKTGTNSEKKNEKNKSHFFYWGKSSPVWNMESTAAVLVYGPTWASFVASKPTS"
FT   CDS             complement(231461..231949)
FT                   /transl_table=11
FT                   /locus_tag="BB4149"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX1"
FT                   /protein_id="CAE34512.1"
FT                   /translation="MLFTGHVISEYRHIMSDADLSPDIEPRQADASQPGAEPKGTSSSR
FT                   KSLSKLRRELTDDELSSPAVQRMLVDEIERLDVERNQLVEFRDKFYDSKTRIGVLEEKF
FT                   TGKMAIEVIHVACNTVGAAALGYAPSIWDKQPMAWLFAIFGTILVVMSLIAKVIKVKP"
FT   misc_feature    complement(join(231476..231544,231554..231622))
FT                   /note="2 probable transmembrane helices predicted for
FT                   BB4149 by TMHMM2.0 at aa 110-132 and 136-158"
FT   CDS             232036..232242
FT                   /transl_table=11
FT                   /locus_tag="BB4149A"
FT                   /product="phage-related hypothetical protein"
FT                   /note="no significant database matches"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFX0"
FT                   /protein_id="CAE34513.1"
FT                   /translation="MSISAMMKQKPGTCDGDRAFLQTCRWTLAWAELLTPELTQAKRVS
FT                   RHLPANPYKYWWAVSGSNTRPTD"
FT   tRNA            complement(232201..232276)
FT                   /note="tRNA Lys anticodon CTT, Cove score 88.69"
FT   CDS             complement(232393..233133)
FT                   /transl_table=11
FT                   /locus_tag="BB4150"
FT                   /product="putative short-chain dehydrogenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2841"
FT                   /db_xref="GOA:Q7WFW9"
FT                   /db_xref="HSSP:1Q7B"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW9"
FT                   /protein_id="CAE34514.1"
FT                   /translation="MAALDGKVAFITGASRGIGAAIARRLAADGADIALTYVSAADKAH
FT                   ALVEELRATGRRAHAYAADAADAGQVREVVARAAADLGRLDILVNNAGIFLAGPVEDIS
FT                   ADDYDRSMDINVRAVFVATQAALPHLGEGGRIVNIGSCLAGHTGRPGVALYAAGKAAVA
FT                   AFTRALARELGPRGITANVVHPGPIDTDMNPAGTDQAAALVQMLAVPHYGEPADIANMV
FT                   AYLAGPQARYVTGAEISVDGGYAA"
FT   misc_feature    complement(232402..233121)
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 6e-87"
FT   CDS             233237..233857
FT                   /transl_table=11
FT                   /locus_tag="BB4151"
FT                   /product="putative TetR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2840"
FT                   /db_xref="GOA:Q7WFW8"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW8"
FT                   /protein_id="CAE34515.1"
FT                   /translation="MAERGRPRSFERTEALRQAMEVFWSKGYEGASLADLTSAMGINAP
FT                   SLYAAFGSKEALFREAVQRYADTEGARTRRALLEAPDARAAIEGMLLAGAQTCTLNGKP
FT                   PGCLMVLGATAGPAQHAPVRGWLGEHRRDMQALILRRLEQGRRDGEIGPDADLAALAAF
FT                   YATVLHGMSIQARDGADRAALQAVARQAMHAWEALARPPAAAR"
FT   misc_feature    233279..233419
FT                   /note="HMMPfam hit to PF00440, DE Bacterial regulatory
FT                   proteins, tetR family, score 9.1e-12"
FT   CDS             complement(233859..235967)
FT                   /transl_table=11
FT                   /locus_tag="BB4152"
FT                   /product="exported protein, conserved"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2839"
FT                   /db_xref="InterPro:IPR007844"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW7"
FT                   /protein_id="CAE34516.1"
FT                   /translation="MTRKKKIFLGLAGAVLALLAAVLVILATLDWNRLKPTINERASAA
FT                   LGRPFAIQGDLSVQWAREPGQGGWRGWVPWPHFVVHDVAIANAVWARDSNLLTLRRGEF
FT                   RLAPLPLLRQRVVIRRIQLSGLRADLQRRADGVANWEFTMPDTGEPSPWKVDIDAIGFD
FT                   QGAIRYADAIAQADLDVLVDPLGKPVPFAELAGAPAGDGAADQAAGGADSGKPADAAAL
FT                   AAPPDYAFGWQVNGRYKELPLEGTGKVGGMLALRDARQPFPVQAEVAIGSTKVEVVGTL
FT                   TDPMSLGALDLRLKLAGASMANLYPLTGVTLPDTPPYSTDGRLVARLQDPQGARFEYRD
FT                   FNGKVGASDLHGGITFALQQPRPRLSGKLSSRLLRMADLGPLIGVQSGGAKSVKAEGEK
FT                   AVAQPADKVLPVQEFRTDRWRVMDADVELRGERIVHSDRLPISDLTAHVLLDDGVLTLA
FT                   PLRFGMAGGSLDATLKLDGRQAPMSGNVRLAVRRLRLKQLFPNVQAMQKALGEVNGDVA
FT                   ISGQGNSVAALLGSASGETKLLVNDGVISRALMEIAGLNVGNYVVSKLFGDDEVKINCA
FT                   AADMGMTRGVMTPRVFVIDTENAVVNITGSIDFRKELLNLDIDPDSKGFRLFSLRSPLY
FT                   VKGSFKKPDAGVHVGPLAARGAGAVALGILLTPAAGLLALIAPSTSDDNHCATLLTEMR
FT                   KPAQAPRR"
FT   misc_feature    complement(235890..235967)
FT                   /note="Signal peptide predicted for BB4152 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.351 between residues 26 and 27"
FT   CDS             complement(236108..236767)
FT                   /transl_table=11
FT                   /locus_tag="BB4153"
FT                   /product="putative hydrolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2838"
FT                   /db_xref="GOA:Q7WFW6"
FT                   /db_xref="HSSP:1P7M"
FT                   /db_xref="InterPro:IPR005019"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW6"
FT                   /protein_id="CAE34517.1"
FT                   /translation="MLASVVPELAFLFPRIMDPRTDFADGLTRCGWLDHSVDYVAYHDH
FT                   EWGRPQADDRALFEQLCLEGFQSGLSWRTILNKRAAFRRAFADFELERVAGFDERRVEA
FT                   LLQDAGIVRHRGKIEAVINNARRALALRDREGSLAAFFWRYEAPPRGADAPFEVLARTA
FT                   ESEALSKALKKQGWSFVGPTTVYAFMQSVGMVNDHHPRCHHHAACEQARYRFQRPD"
FT   misc_feature    complement(236147..236674)
FT                   /note="HMMPfam hit to PF03352, DE Methyladenine
FT                   glycosylase, score 9.4e-80"
FT   CDS             complement(236799..237263)
FT                   /transl_table=11
FT                   /locus_tag="BB4154"
FT                   /product="putative MerR-family transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2837"
FT                   /db_xref="GOA:Q7WFW5"
FT                   /db_xref="HSSP:1Q06"
FT                   /db_xref="InterPro:IPR015358"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW5"
FT                   /protein_id="CAE34518.1"
FT                   /translation="MTRSAQAVRRPDLLSVGEVAARTGLAVSALHFYEAKGLIASTRTA
FT                   GNQRRYARAVLRRVAVIRVAQRMGLPLAAIAQALATLPTSRAPTVADWRRLSRAWRQEL
FT                   DQRILGLTQLRDQLDGCIGCGCLSLRECPLRNPDDAMACLGAGPHFPPHE"
FT   misc_feature    complement(237111..237215)
FT                   /note="HMMPfam hit to PF00376, DE Bacterial regulatory
FT                   proteins, merR family, score 8.6e-12"
FT   misc_feature    complement(237147..237215)
FT                   /note="PS00552 Bacterial regulatory proteins, merR family
FT                   signature."
FT   CDS             complement(237776..238528)
FT                   /transl_table=11
FT                   /locus_tag="BB4155"
FT                   /product="putative DNA-binding protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2836"
FT                   /db_xref="GOA:Q7WFW4"
FT                   /db_xref="InterPro:IPR005471"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW4"
FT                   /protein_id="CAE34519.1"
FT                   /translation="MAPFSICVSILLLVGDSNRAGVTARYVSEQLGLSLSTAYRWIDML
FT                   RQSGLVVRHPSTRKLHLGPLAFDLGVQAVARPYVPPAIEKVLKPLASQHACRLHLVRCS
FT                   GDYSVLQRTYFDVAELEIVPSKVAVMRLLGIGPAGVCLLSRWPDYEIDRYLVRNQDGLL
FT                   AAGYQGADIRERVRQCRKLGCFVTRSVLTPGYTAVAIDFEVDGVVYGVSAASAGSEGGK
FT                   QFHAIREALDRARASLATQAVPEFALEG"
FT   CDS             complement(238535..239797)
FT                   /transl_table=11
FT                   /locus_tag="BB4156"
FT                   /product="ABC transport protein, Solute-binding component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2835"
FT                   /db_xref="GOA:Q7U382"
FT                   /db_xref="InterPro:IPR006059"
FT                   /db_xref="UniProtKB/TrEMBL:Q7U382"
FT                   /protein_id="CAE34520.1"
FT                   /translation="MMKRVASLLVSSLLYSGCAMADGSIVVWMTDSRPGYKKWLETEAA
FT                   AFKAKHPGVKVSVVQMSPNDAYLKIPAAAAAGGLPDVIWTTYGLAPWLDGMKGGKLADV
FT                   SDLIDRLGKNRFDEDALKQWSYRGAVACVPVARTPTYLMYRADLFKKAGLAAPESWEDV
FT                   IRAAQKLNDPANGKYGIAMPGKTDFSPRFAYGMILYSMGGSTFDAQGNPIFESPASIDA
FT                   LKVYKQLYAYSPPGSLNFGFSEIQRALAQGRVAMTISNPSSMATFQRTNRDEGSTLALA
FT                   LPGKVNRTIQNQRGWCIADGKNSQDAKAFVEHLFSTNSFAAYLDAASISSFPVYHDQAA
FT                   YDQFQASNETVKRFPGATDFIRRHTVGTMPGIDGVGLTPKSGDLISSGQIESAINKMLA
FT                   NDMSEQETAAAMQKETLRLLN"
FT   misc_feature    complement(238571..239704)
FT                   /note="HMMPfam hit to PF01547, DE Bacterial extracellular
FT                   solute-binding protein, score 7e-42"
FT   misc_feature    complement(239240..239263)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   misc_feature    complement(239711..239779)
FT                   /note="1 probable transmembrane helix predicted for BB4156
FT                   by TMHMM2.0 at aa 7-29"
FT   misc_feature    complement(239735..239797)
FT                   /note="Signal peptide predicted for BB4156 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.997 between residues 21 and 22"
FT   CDS             complement(239839..241101)
FT                   /transl_table=11
FT                   /locus_tag="BB4157"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2833"
FT                   /db_xref="InterPro:IPR004792"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW3"
FT                   /protein_id="CAE34521.1"
FT                   /translation="MDIPQDSYDLVVVGGGTSGVFAAISAARRGLRVALVEASGMLGGT
FT                   LTQVTLGGICGAWTGTAHTQVVHGLFDEFVHAMRKAQACDGLYSYGHVTALPYEPVKVR
FT                   YLLDQLLPPNVTTFFHSRLFAVDMEGERIARVHLAGVEGPFSLAARAYVDATGNASLAG
FT                   LCATPLRRGENGTVQAASSMFRVIGADVDPRVRDVRTEIRLAIEKHNASGQAEAFKRSA
FT                   VAVYVHPDQRLLHFNATRVYFESTADDALAAALDMSRVETEARKEAFRLVELLKREVDG
FT                   FANIEIVDLGSSVGVRDSRNIVNDHPLTEAMVRDGDKPANSVAYSAWPIEFHGSNTQTH
FT                   WEPLEGDRYYGIPYESCLPQGIQNALVIGRAISSTPLAQASCRVTAPCIQMGESAGIAA
FT                   HELVASSSRTAFSELASMKFI"
FT   CDS             complement(241106..242233)
FT                   /transl_table=11
FT                   /locus_tag="BB4158"
FT                   /product="ABC transport protein, ATP-binding component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2832"
FT                   /db_xref="GOA:Q7WFW2"
FT                   /db_xref="HSSP:1G29"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW2"
FT                   /protein_id="CAE34522.1"
FT                   /translation="MKSISTAIQLNSVSKSYGGSPILDDISLAIAPGEFVVILGESGCG
FT                   KSTLLKIIAGLEQPTSGAVRIGDAVMTDVPPKDRRLAMVFQSYALYPHLKVWENISFPI
FT                   KMSLWKYAYSLPLFGRLFPNRKRILNTMREAAERAAGKVRLTPLLDRKPRALSGGQRQR
FT                   VALARAIVDGREICLMDEPLSNLDAQLRASTRREIADLHRDLGHTIVYVTHDQTEAMTM
FT                   GTRVILMREGRIEQDGAPAELYEQPATTYAAEFLGSPRINFMRVASAQFSQAAAQAVVT
FT                   LGDGRCPLDPHGDLLIGVRPDHLEITPDAQGEFLFLSSEYLGGKTIVSLKRESGETMVQ
FT                   AFGSDRLDRAQRYSVRFEGRHAMCFDPQSGRRIRE"
FT   misc_feature    complement(241538..242137)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   1.9e-52"
FT   misc_feature    complement(241724..241768)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(242093..242116)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(242244..243071)
FT                   /transl_table=11
FT                   /locus_tag="BB4159"
FT                   /product="ABC transport protein, inner membrane component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2831"
FT                   /db_xref="GOA:Q7WFW1"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW1"
FT                   /protein_id="CAE34523.1"
FT                   /translation="MRIINRFPLPAAMAWLVGAVLFVPIAWMVLTAIRPEHELYQVPLR
FT                   ILPGALDMANIQSAWYEKSFGQFFFNSAVNSVLSVLFSMPIGILAGYAFSRFEIRHSKY
FT                   YRAYVLFAYMVPIIILVVPFYLIAVWLNIYNTRMGHVLGLSTYAIPFATWVMIGYFEQL
FT                   PKEVEHSAAIDGADRMKTLIYILAPMIKPGVVATALLTFILAWDDYIFALILLDSETLR
FT                   TLPLAIGYLSSDYELTDGLMMAMGTITTLPILLLFVFFQKYFVGGMTSGAVKG"
FT   misc_feature    complement(join(242292..242351,242460..242528,
FT                   242589..242657,242685..242753,242787..242855,
FT                   242985..243053))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB4159 by TMHMM2.0 at aa 7-29, 73-95, 107-129, 139-161,
FT                   182-204 and 241-260"
FT   misc_feature    complement(242373..242597)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 1.5e-11"
FT   misc_feature    complement(242988..243071)
FT                   /note="Signal peptide predicted for BB4159 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.921) with cleavage site
FT                   probability 0.563 between residues 28 and 29"
FT   CDS             complement(243058..243924)
FT                   /transl_table=11
FT                   /locus_tag="BB4160"
FT                   /product="putative ABC transport protein, inner mebrane
FT                   component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2830"
FT                   /db_xref="GOA:Q7WFW0"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFW0"
FT                   /protein_id="CAE34524.1"
FT                   /translation="MKENRLGMLLLSPALLVLTALVIVPLLATIAFSFFDLRLGESSAK
FT                   FIGLQNYGDLLASEQFWRSLRITFLWIVLSVIPQLALGTIIAVLLDRVTRFRAFLRGAI
FT                   FLPWVIPVAVVAYMWQWLLTPETGLVSGIAGGAGLEGLARFPFLSSPDTAFATALIVSA
FT                   WRGIPFVVIMVFAALQGISDEDYHAARVSGGNSIQCFVYVTLPYLKGLLLILAVIRTMQ
FT                   IANNYSLMALLTNGGPADSTRILPLMIYELAFREFALGKASALGVIALALTCLCIAFMM
FT                   RRRHADN"
FT   misc_feature    complement(join(243088..243156,243262..243330,
FT                   243391..243459,243553..243621,243658..243726,
FT                   243820..243888))
FT                   /note="6 probable transmembrane helices predicted for
FT                   BB4160 by TMHMM2.0 at aa 13-35, 67-89, 102-124, 156-178,
FT                   199-221 and 257-279"
FT   misc_feature    complement(243163..243396)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 4e-11"
FT   misc_feature    complement(243841..243924)
FT                   /note="Signal peptide predicted for BB4160 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.995) with cleavage site
FT                   probability 0.722 between residues 28 and 29"
FT   CDS             complement(243921..245294)
FT                   /transl_table=11
FT                   /locus_tag="BB4161"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2828"
FT                   /db_xref="GOA:Q7WFV9"
FT                   /db_xref="InterPro:IPR005656"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV9"
FT                   /protein_id="CAE34525.1"
FT                   /translation="MTSSAPLIDFAHDLRYEDIPVHVRSIVREQIIATVGSILGGAQLP
FT                   VAKSFEQSILATFGRGESSAFGAGTGMSAASAALYNSGLAQLLDWEDWVLISHVGAAVV
FT                   PVAWALAEERGLRLNDVIVAVTIGNEIAGRTSRAIQRGAYLGNGLPNHQIELPLVAGRL
FT                   LGLDRRQLGYALGHSCYMAMENCPVGWTTDSKLLVNGLPAMWAIASANMARQDIVGRGD
FT                   IVEHPAGYLATVSESIDFKELTRDIGVKWYTETLSTKKHAGCAYNLPAAECAMSIREEI
FT                   APEDVERIVVECSTATLYVGGRYDDFEPGVLDAYEQGLLTHVGLCFDTKFCVAAAYVHG
FT                   DLIHEQYLVENATDARVKALYGKISLVPSERLQKAQFQDFKYGATVTVHGRDGRTATRT
FT                   VEQMLGGYDRPFDHATKLADGARGLLPPEAVDGIVARLRDETGNPLASEISTLINGAP"
FT   misc_feature    complement(243951..245294)
FT                   /note="HMMPfam hit to PF03972, DE MmgE/PrpD family, score
FT                   2.2e-08"
FT   CDS             complement(245291..245695)
FT                   /transl_table=11
FT                   /locus_tag="BB4162"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2827"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV8"
FT                   /protein_id="CAE34526.1"
FT                   /translation="MPCRVVPNTPAIFCHGKRAMFFEDIERIRSALQRSGRKYLTPRLE
FT                   AVLGTVYQLKRGEESVYLCVEPSMVVREHAHRPHCTIQLGAPDWDTVLSGERSIMSKVL
FT                   AGKCGFLKHERRYIMHFSMLLQAVLLEEKQ"
FT   CDS             246139..247050
FT                   /transl_table=11
FT                   /locus_tag="BB4163"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2826"
FT                   /db_xref="GOA:Q7WFV7"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV7"
FT                   /protein_id="CAE34527.1"
FT                   /translation="MASPRKYPGKPIRMIIPFPAAGVTDISARLLAAAMAEELGQTIIP
FT                   ENKPGAAGNIAAKYVADAAPDGYTILFNNSATHGINPTLFKSINFDAERDFTPILYCSS
FT                   SPNLFVANKNFPGDTIADFVDIARQQGPAVMMALGSLGSSQHMAAELLRHVTATQFTTV
FT                   PYRGGALALQDLIGGTVQTLCDGYPSSIQHIRRGTIKALGVTSPERIPSAPDIPAVAET
FT                   LPGYSAYGWFGLVGPAGMDADVVAVLNQAGNKALQDPELRSRYAEVGATLHGGPPEVFK
FT                   QHIQDEIKRWREIIIATNAKPE"
FT   misc_feature    246217..247038
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 7.8e-83"
FT   CDS             247065..247775
FT                   /transl_table=11
FT                   /locus_tag="BB4164"
FT                   /product="putative GntR-family transcriptional regulatory
FT                   protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2825"
FT                   /db_xref="GOA:Q7WFV6"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV6"
FT                   /protein_id="CAE34528.1"
FT                   /translation="MSSTKRPASRADEITQELVRMIQLADARRIAKLPTEMELAAQLGI
FT                   SRPVIRESLSRLESLNMVTRRQGSGLYIVAPEKRSPEALVLLEQSAPLSPRSIAEAMSV
FT                   RAILELETGRLAALNHRQVDLDRMAAEIERLAATGARGLEAAEADEAFHRALSDAAGNV
FT                   TLSQVLDLFLRLSWRRRVEYFSQPKLGKQSIIEHQEILNAVASGDPDAVSTAIRTHLNS
FT                   AERFWDSKYVKKKS"
FT   misc_feature    247104..247283
FT                   /note="HMMPfam hit to PF00392, DE Bacterial regulatory
FT                   proteins, gntR family, score 3.2e-15"
FT   misc_feature    247161..247235
FT                   /note="PS00043 Bacterial regulatory proteins, gntR family
FT                   signature."
FT   CDS             247772..249016
FT                   /transl_table=11
FT                   /locus_tag="BB4165"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2824"
FT                   /db_xref="InterPro:IPR007506"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV5"
FT                   /protein_id="CAE34529.1"
FT                   /translation="MILTDEQQGLLNGDAGDVVAKYFTWLVEWGRLMGAQRLVKVDSVH
FT                   TSGITAQGRVAGAVSPEARKKTLEQVIEFTSVRMRAPTATHVARVCVEDDKGGGLSAED
FT                   QAFQKLVIDRARDAGIQLTWTCAPYIAGILPSKNQICAWTESSAVVYINAMVGARSTRN
FT                   GTESAIAAAMSGWFPEFGVLLEENRQADLIVEVEAAPSEELCDWGFLGYFAGEVSGLRT
FT                   PVLDQLRAPSLEEAKQLSAAVATGGGCTMFHIAGVTPEAPTLDAVARRPLERIHYTAAD
FT                   RARIAAKLNTLTSERIDYVVLGCPHATLHEIQVIASQLEGRRVCPNVRLEVWTAWAVRA
FT                   VAQRMGLVDVIERAGGKVLTDSCPSITRSGHGRRMVTNAVKQGNYLQGMTGHEVAVGKL
FT                   TDVVSAALTGTWQGL"
FT   CDS             249018..249452
FT                   /transl_table=11
FT                   /locus_tag="BB4166"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2823"
FT                   /db_xref="InterPro:IPR012016"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV4"
FT                   /protein_id="CAE34530.1"
FT                   /translation="MLTIDTASRTFHCKTWVTGQTQGKAVIARERISFWGGFDPQTGRI
FT                   VDPYSSLRGRDISDCVLILLSSKGSSGTSGMLSLATRAGHAPAAMIQVEMDPVTVMGCL
FT                   VNNIPLLQATGFDPFEQIQDGDLVRIDGENGTITLAPGQA"
FT   misc_feature    249048..249434
FT                   /note="HMMPfam hit to PF01989, DE Protein of unknown
FT                   function DUF126, score 1.6e-10"
FT   CDS             249481..249786
FT                   /transl_table=11
FT                   /locus_tag="BB4167"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2822"
FT                   /db_xref="GOA:Q7WFV3"
FT                   /db_xref="InterPro:IPR007138"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV3"
FT                   /protein_id="CAE34531.1"
FT                   /translation="MSQPYLQVIAHYHAQPGAQEQVGALLARLAEHTRTEPANLYYEYF
FT                   QSGSDPCHFVILEKYRDMHGLDEHRQTAHFQAIGIGQIIPLLARREVESHMVTPDS"
FT   misc_feature    249493..249780
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02619, DE Uncharacterized ACR, YneC
FT                   family COG1359, score 1.8e-08"
FT   CDS             complement(249844..250992)
FT                   /transl_table=11
FT                   /locus_tag="BB4168"
FT                   /product="putative alcohol dehydrogenase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2820"
FT                   /db_xref="GOA:Q7WFV2"
FT                   /db_xref="HSSP:1O2D"
FT                   /db_xref="InterPro:IPR018211"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV2"
FT                   /protein_id="CAE34532.1"
FT                   /translation="MFEFCTHARTLVGAGASDALGETLAARWGASRVLLVTDGALVSLG
FT                   LAGRLRDALASAGHTVAMFDEVVADPPESVVERAIIAARDARAQVIVGFGGGSSMDVAK
FT                   LAAAFAGTTQDLRQAYGIGLVAGPRLPLVQVPTTAGTGSEATPIAVVTTGDGAKAGVIS
FT                   PVLYADLAVLDATLTLGLPPAITAATGIDAMVHATEAYTSRVLKNPISDALAREALRLL
FT                   FRALPLACRDGGDLAARQDMLLGAMLAGQAFANAPVGAVHALAYPLGSAFHVPHGLSNS
FT                   LVLGPVLRFNSLRCETQYAELADVILPGYAGGVAEKAAAFVQAMAEVAGALELPTRLAQ
FT                   VGVTAADIPALAGLALQQQRLLGNNPRDVTLADATRLYEEAF"
FT   misc_feature    complement(249871..250971)
FT                   /note="HMMPfam hit to PF00465, DE Iron-containing alcohol
FT                   dehydrogenase, score 1.2e-89"
FT   misc_feature    complement(250396..250482)
FT                   /note="PS00913 Iron-containing alcohol dehydrogenases
FT                   signature 1."
FT   tRNA            complement(251286..251361)
FT                   /note="tRNA Lys anticodon TTT, Cove score 94.70"
FT   CDS             complement(251491..252288)
FT                   /transl_table=11
FT                   /locus_tag="BB4169"
FT                   /product="putative exported protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2818"
FT                   /db_xref="InterPro:IPR004478"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV1"
FT                   /protein_id="CAE34533.1"
FT                   /translation="MSTKFLKTLAAFALGAAVFAQPALAQDKPLKIGVTAGPHAQIFEV
FT                   VKQEAAKQGLNIQVIEFSDYVQPNVALASGDLDANSYQHQPYLDNANADRGYKLVSIAK
FT                   TVIFPIGVYSKKVKNLNELKDGARIGIPNDPTNGGRALLLLQEHGLIKLRPEAGLKATP
FT                   IDVVENPRKLRFIELDAAQLPRSLDDTDASAVNTNFALEAGLDPSKDALVRESAESPYA
FT                   NVLVVREQDKDRADLRKLVSIYQSAPVKEFILGKYKGAVVAAW"
FT   misc_feature    complement(251497..252204)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF03180, DE NLPA lipoprotein, score
FT                   4.2e-134"
FT   misc_feature    complement(252214..252288)
FT                   /note="Signal peptide predicted for BB4169 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 25 and 26"
FT   CDS             complement(252336..252935)
FT                   /transl_table=11
FT                   /locus_tag="BB4170"
FT                   /product="ABC transport protein, inner membrane component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2817"
FT                   /db_xref="GOA:Q7WFV0"
FT                   /db_xref="InterPro:IPR000515"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFV0"
FT                   /protein_id="CAE34534.1"
FT                   /translation="MVGVSGAISVVVGIPLGVLLIVTGRGGMLQNLAVNRVLAAVVNGT
FT                   RSVPFIILMVAIIPFTRLLVQTSIGTTAAIVPLAVAAIPFMARVAENAMREVDPGLITA
FT                   ARAMGASPLQIICKVLLPEALPGLVAATIVTIVSLIGYSAMAGAIGGGGLGDLGIRYGY
FT                   QRFLPEVMLAVVVVLIALVQVVQSLGDWLVRRMSHR"
FT   misc_feature    complement(join(252372..252440,252498..252566,
FT                   252681..252749,252759..252827,252864..252923))
FT                   /note="5 probable transmembrane helices predicted for
FT                   BB4170 by TMHMM2.0 at aa 5-24, 37-59, 63-85, 124-146 and
FT                   166-188"
FT   misc_feature    complement(252447..252659)
FT                   /note="HMMPfam hit to PF00528, DE Binding-protein-dependent
FT                   transport systems inner membrane component, score 7.2e-18"
FT   CDS             complement(252946..254034)
FT                   /transl_table=11
FT                   /locus_tag="BB4171"
FT                   /product="ABC transport protein, ATP-binding component"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2816"
FT                   /db_xref="GOA:Q7WFU9"
FT                   /db_xref="HSSP:1B0U"
FT                   /db_xref="InterPro:IPR003593"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFU9"
FT                   /protein_id="CAE34535.1"
FT                   /translation="MIHIENLSKTYATPHGRFEALRGINLHIQQGEVFGIIGPSGAGKS
FT                   TLVQCINLLERPDQGSIAIGGQALVGLGEAQLRNQRRRIGMVFQGFNLLARRTVYGNVA
FT                   LPLEIAGVARAEIPARVERLLALVGLEHLRDRYPSQISGGQKQRVGIARALANDPDVLL
FT                   SDEATSALDPETTHNILALLRDINRKTGVTVVMITHQMEVVREICDRVAVLSHGEVVEL
FT                   GSTREVFAAPRHEVTRAMVSAATASDLSEATLAAVKQRIDALAAAEPGRAVRLWRLSLK
FT                   GVAAGEPLWSDLAREFALDVSLVQARVEDIQGVAVGTLFVLAQGAPHAVKDALAALAAR
FT                   EITVEEIAHEPATDRSAYHVAA"
FT   misc_feature    complement(253384..253944)
FT                   /note="HMMPfam hit to PF00005, DE ABC transporter, score
FT                   8.8e-70"
FT   misc_feature    complement(253570..253614)
FT                   /note="PS00211 ABC transporters family signature."
FT   misc_feature    complement(253900..253923)
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             complement(254199..256424)
FT                   /transl_table=11
FT                   /locus_tag="BB4172"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2815"
FT                   /db_xref="GOA:Q7WFU8"
FT                   /db_xref="InterPro:IPR000322"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU8"
FT                   /protein_id="CAE34536.1"
FT                   /translation="MPPKFDFAHTTQLDTVELLTSRPSRIDFDAGDGLHLVVEAHAPGV
FT                   YRLRCGEASLLTDEKSSARARAVAEMLLARQEAVGEATLTPRDDGGGWRIAQGDTTLEV
FT                   LSDPVRVKLYRGDQEVFASEVSAHTPAFGHNALDETDEAVWTVGLGLEGAEPVYGLGET
FT                   PGDLNRRGEAVVSDDPEHRALPLAWSPRGWGVYANTMRRVEHAVGLEPAEGAYVLTIDD
FT                   PVLDLFLFVGEPAEILNQYTALTGRAGQPVLWAMGAWLQQADGQMPTETAALVARLRDQ
FT                   QIALDAVTLALPAAWSFQADKPVLEWDAQRFPDARQMLALFHKHHVHVAASGFPGVLKS
FT                   SLLFEELEDRGWLLTRDDGSAQVFDGNAATGGQPYGLLDLSYRDAYAMWVERHRQLIED
FT                   GLDAPACDAQIAIPDGVSARNGETGPALRTMYPLLARRALFDAVAGLKVPPEGVVPSTD
FT                   LFPAAQRLPWQVGPRVTNDWAGLEHSLRTALSIGASGVPVQVHALGSAQAPLEGMTAEL
FT                   YLRWLGACVLSANFSFQGVPGLLPDAFGEEALAHARTWMQWRYRLIPYVLGAIEDSART
FT                   GLPVQRSMAMSFPHDPHAHAWDLQYLLGPALLVAPVTQPGKQVRVYLPKGDAWWDLNTG
FT                   HRYEGGTTWTVECELDRYPVFGREGHMLCLGPAAQHTGEFNSARILDEVWMFGMPVHNP
FT                   VVMRNKIRVMQMQGSSYIKGLEGLRILPSEGLEVKRRGAEVRISRAR"
FT   misc_feature    complement(254214..256169)
FT                   /note="HMMPfam hit to PF01055, DE Glycosyl hydrolases
FT                   family 31, score 1.4e-10"
FT   CDS             complement(256719..258617)
FT                   /transl_table=11
FT                   /locus_tag="BB4173"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2814"
FT                   /db_xref="GOA:Q7WFU7"
FT                   /db_xref="InterPro:IPR017610"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFU7"
FT                   /protein_id="CAE34537.1"
FT                   /translation="MNSRIFPAAMSAPYAPLQPAVVVHDEQGRLYSAAYGDVYHSRDDA
FT                   AGQAEHVFLRGNGLPQRWRGRARFTVCETGFGMGLNFLTLWQAWRDDPARPRRLHMLSL
FT                   EGHPFAREDLLAVLRAHAPAGLQALATQLAAQWPPLLPGLHRLEFEGGALTLTLGFGAA
FT                   QQLAPRLTARVDAYFLDGFAPRGNPAMWDPHMLQALARLAAPDATLASWCSAGQVRQAL
FT                   QQAGFAVRRAPGFGGKWHMTLGQRLPGVATPDDAPDDDGAPVLVVGAGLAGAAVAHALA
FT                   LRGRAVTVLDAARLAGLASHAGHAAAALTPVIARDDNPRARLSRAGSQRAWLRWRDLPA
FT                   PAAPRRCGTVQLERDAGRAAALAQTLQILQFPADWVRMVDRDQAGALAGLPVARGGVFF
FT                   ADGMLVRPGALIDALLAGEGISTIAAQAARLRRHGAQWQVLDAQGRQVAQAPVVVLANA
FT                   ADAPRLLADSGLLEPLPRLARMHALAGEVTLLPAEALSGGPRCVVGGEGYLLPAVDGWC
FT                   VAGSTYVHGAAQALTGAEGQRVNLDKAAGLLGQAPAAFASLQPGSLPGWAGWRAVLPGR
FT                   LPAAGPLAHAPGLWLAAGYASRGLSWAALMGDVIAARLCGEPGPLETDLLAQIAPR"
FT   CDS             258748..259641
FT                   /transl_table=11
FT                   /locus_tag="BB4174"
FT                   /product="inositol monophosphatase-family protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2813"
FT                   /db_xref="GOA:Q7WFU6"
FT                   /db_xref="HSSP:1IMF"
FT                   /db_xref="InterPro:IPR017955"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU6"
FT                   /protein_id="CAE34538.1"
FT                   /translation="MQTSAQRSPASATLDLGAAVDAAVTAAHAGAAILQSYAHHRSDLV
FT                   IDRKARNDLVSQADRESEAAVISVLRERTPQFGIVAEETGGAAQGPATWYIDPLDGTTN
FT                   YLHGIPHYAVSIALVAHAGTRVVAGADLQEDTPVIGVVYDPSSEELFTAVHGIGSWLNG
FT                   HRISCSRTSTLDDAVLATGFPFRDFSFAHQYMPMLHDAIRRTRGVRRMGAAALDLAWTA
FT                   CGRYDGYWEMGLAPWDVAAGTLLVREAGGVCTDMMRQQSWPSGGRVVAGNRHIHGALFD
FT                   MVSPHLDAPAPGSSQA"
FT   misc_feature    258748..258834
FT                   /note="Signal peptide predicted for BB4174 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.785) with cleavage site
FT                   probability 0.628 between residues 29 and 30"
FT   misc_feature    258793..259623
FT                   /note="HMMPfam hit to PF00459, DE Inositol monophosphatase
FT                   family, score 5.9e-73"
FT   misc_feature    259027..259068
FT                   /note="PS00629 Inositol monophosphatase family signature
FT                   1."
FT   misc_feature    259456..259500
FT                   /note="PS00630 Inositol monophosphatase family signature
FT                   2."
FT   CDS             complement(259660..261336)
FT                   /transl_table=11
FT                   /gene="fadD2"
FT                   /locus_tag="BB4175"
FT                   /product="long-chain-fatty-acid--CoA ligase"
FT                   /EC_number="6.2.1.3"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2811"
FT                   /db_xref="GOA:Q7WFU5"
FT                   /db_xref="InterPro:IPR000873"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU5"
FT                   /protein_id="CAE34539.1"
FT                   /translation="MLRPWLAHYPAGVPHEISPQDYTSLTDLLDQACRRHAGQVACRSM
FT                   GSDMTYAQLDAHARHFAAWLQGRGLARGARVALMMPNVPAYLVCLLGTLRAGMVVVNVN
FT                   PLYKADELQRQLLDSGAETIVILENFAHTLQAVPDRGALSHVVVVGPGDLLGGLKAPLV
FT                   NLAARYVKKLVPPWRIDGAHRLPDALRDGARATFTPPALGMDDLAVLQYTGGTTGVPKG
FT                   AMLSHGNLVANVLQTEAVAQPVLHDLHGRQLTIISALPLYHVFAMTVCGLYGMHAGMRN
FT                   LLVINPRDQAALIAAWRQAPVNIFPGVNTLFNALVNNPDFAKLDFTDLRLTLGGGMAVQ
FT                   RQVAERWLELTGHPLIEGYGLSETSPVATVNPTDAKTYSGSIGLPLPSTDVAILDDDGA
FT                   PVPLGERGEVAIRGPQVMLGYWQKPEETRNVMTADGFFLTGDIGIMDEAGYTRIVDRKK
FT                   DMIAVSGFKVYPNEVEAVIAAHPGVLECAVIGVPDEHSGEAVKVFVVKKDPALTAEAVL
FT                   QWCEERLTGYKRPRHVEFRDELPKSNVGKILRRELRPEAGS"
FT   misc_feature    complement(259873..261189)
FT                   /note="HMMPfam hit to PF00501, DE AMP-binding enzyme, score
FT                   8.9e-123"
FT   misc_feature    complement(260674..260709)
FT                   /note="PS00455 Putative AMP-binding domain signature."
FT   CDS             261413..262609
FT                   /transl_table=11
FT                   /locus_tag="BB4176"
FT                   /product="putative hydrolase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2810"
FT                   /db_xref="GOA:Q7WFU4"
FT                   /db_xref="InterPro:IPR010168"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU4"
FT                   /protein_id="CAE34540.1"
FT                   /translation="MKLIEPIVAWRQDIAAIRRDIHAHPELAFEEFRTADVVAARLQEW
FT                   GIEVDRGLGGTGVVGIIRGTREGARAVGLRADMDALPMQEANTFEHASRNPGKMHACGH
FT                   DGHTAMLLAAARFLSQQRDFAGTVYVIFQPAEEGGGGAKRMINDGLFTRFPMEAVFGMH
FT                   NWPGMKVGQFGLTAGPIMASSNEFAIHIKGKGTHAGMPHLGVDPVMAAVQLAQSLQTIV
FT                   TRNRNPLDAAVLSITQIHTGSADNVVPNEAVMRGTVRTFTLETLDLIERRMGEITRLTC
FT                   AALDCEGELEFRRNYPPTINHPAESAFCAGVMRGIVGAENVNDHVQPTMGAEDFAFMLQ
FT                   DKPGCYVWIGNGSGDHRDAGHGAGPCMLHNGSYDFNDELLPLGATYWVELARQWLARP"
FT   misc_feature    261443..262399
FT                   /note="HMMPfam hit to PF01546, DE Peptidase family
FT                   M20/M25/M40, score 3.5e-81"
FT   CDS             complement(262623..263501)
FT                   /transl_table=11
FT                   /locus_tag="BB4177"
FT                   /product="putative transcriptional regulator"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2809"
FT                   /db_xref="GOA:Q7WFU3"
FT                   /db_xref="HSSP:1IXC"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU3"
FT                   /protein_id="CAE34541.1"
FT                   /translation="MTPEQLLTFASVADAGNISRAAELLHLSQPAVSGQLRMLQDWFGE
FT                   PLYRRSGHGIVLTAAGERLAEHARQLRQVYSQAGALRDAWRGLETGSLRLGASTTPASY
FT                   LLPGLVAAFRARYPAVGVHLSDGNTRQIVERLPSLDLAFIEGEVPAGLPADTVVHPWRQ
FT                   DEVVAIVRSDHTLAGNGAATLRDLAAWPQVTREPGSGVRGLVERAFASAGLAPAVGLEL
FT                   AGVEGVKQAVRAGLGVGFVSIMSVRHEDGSLATLRLLPRPLTRTLSILAPHASAAARAT
FT                   QRFLDACLALP"
FT   misc_feature    complement(262632..263246)
FT                   /note="HMMPfam hit to PF03466, DE LysR substrate binding
FT                   domain, score 2.9e-45"
FT   misc_feature    complement(263316..263495)
FT                   /note="HMMPfam hit to PF00126, DE Bacterial regulatory
FT                   helix-turn-helix protein, lysR family, score 2.7e-19"
FT   CDS             263686..264654
FT                   /transl_table=11
FT                   /locus_tag="BB4178"
FT                   /product="putative integral membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2808"
FT                   /db_xref="GOA:Q7WFU2"
FT                   /db_xref="InterPro:IPR018383"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFU2"
FT                   /protein_id="CAE34542.1"
FT                   /translation="MAAAVVQLADLPFIRQFGFSPLVVGIVCGMLYGNFLRGTMPADWG
FT                   AGVHFTARRLLRIAVAFYGLNISIQQIAAVGLPGLAVSVGVVASTLLIGTVAGQRLLGL
FT                   DRDTAMLTAAGSAICGAAAVLAFEPTLRAAPHKSAVAVATVVLFGTLSMFLYPVIYHAG
FT                   WLPFDTQALGIYIGGTVHEVAQVVGAASNIDPATTEVATIVKMTRVALLVPVLLVLGFW
FT                   LRASAAAGADGKSHAKLPVPWFAIGFLVLAIVNSLDILPSDLVTAIRKLDVFVLTMAMT
FT                   ALGIETRFAQIRKAGPRVMALGLVLYAWLVFGGYGIVKLAT"
FT   misc_feature    263686..264594
FT                   /note="HMMPfam hit to PF03601, DE Conserved hypothetical
FT                   protein 698, score 1.2e-108"
FT   misc_feature    join(263722..263790,263833..263892,263911..263979,
FT                   264007..264066,264100..264168,264196..264264,
FT                   264310..264378,264406..264465,264502..264561,
FT                   264571..264639)
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB4178 by TMHMM2.0 at aa 13-35, 50-69, 76-98, 108-127,
FT                   139-161, 171-193, 209-231, 241-260, 273-292 and 296-318"
FT   misc_feature    264367..264390
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT   CDS             264718..265128
FT                   /transl_table=11
FT                   /locus_tag="BB4179"
FT                   /product="putative thioesterase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2807"
FT                   /db_xref="InterPro:IPR006683"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU1"
FT                   /protein_id="CAE34543.1"
FT                   /translation="MTNPPKSPFTSLPSGREPVLRVMPMPADANIHGDVFGGWIMAQVD
FT                   IAGSIPAARRAAGRVATVAVNAFQFKQPVFVGDLLSFYTSITRTGTTSVTVSVEVYAER
FT                   QRLDAEVVKVTEAVLTYVATDEARRSRPLPTL"
FT   misc_feature    264730..265119
FT                   /note="HMMPfam hit to PF01662, DE Cytosolic long-chain
FT                   acyl-CoA thioester hydrolase, score 4e-31"
FT   misc_feature    264916..264963
FT                   /note="PS00225 Crystallins beta and gamma 'Greek key' motif
FT                   signature."
FT   CDS             265139..266611
FT                   /transl_table=11
FT                   /locus_tag="BB4180"
FT                   /product="putative cation transport protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP2806"
FT                   /db_xref="GOA:Q7WFU0"
FT                   /db_xref="InterPro:IPR006668"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFU0"
FT                   /protein_id="CAE34544.1"
FT                   /translation="MTQSSATPKPPATPRRLDPEDAQHALAEVQECLRRQHLVEDLVHR
FT                   QEQGDDKAHLVEDLVHRQHEAELATLINGLHPADIAFILESLPKDERQTVWRLVSTEHD
FT                   ADVLIEVEDWVRESLIEAMDRQDLVAATGSMDADELADLAPDLPPDVVAEVQKGLTEEE
FT                   RAQLLEAMGYPEDSVGAIMDFEMVRVREDVSLEVVLRYLRRLHELPDHTDQIFVVDRQD
FT                   KLQGVLPIATLLVSEPDTEVRAVMNSDFLTLGPLDSDADAASAFERYDLVSAPVTDEQG
FT                   RLIGRVTIADVVDVIQEDSQEQALSRAGLQEEDIFAPVLMALRNRAPWLLFNLCTAATA
FT                   SFVASRFEDTVSHIVILAFLMSIVAGIGGNSGNQTMTMIIRALAVGRITGRNLWQLVKR
FT                   EMLVTLLVGLCGSLVAALFAWAISDSLSIAVVMMAAMICNMLVGASVGVMVPMLRARFG
FT                   KDPAIGSSVLLTFATDSLGFFIFLGLATIFLL"
FT   misc_feature    265286..265672
FT                   /note="HMMPfam hit to PF03448, DE MgtE intracellular
FT                   domain, score 2e-20"
FT   misc_feature    265676..265852
FT                   /note="HMMPfam hit to PF00571, DE CBS domain, score 0.022"
FT   misc_feature    265868..266029
FT                   /note="HMMPfam hit to PF00571, DE CBS domain, score
FT                   3.8e-09"
FT   misc_feature    join(266186..266254,266339..266407,266420..266488,
FT                   266525..266593)
FT                   /note="4 probable transmembrane helices predicted for
FT                   BB4180 by TMHMM2.0 at aa 350-372, 401-423, 428-450 and
FT                   463-485"
FT   misc_feature    266216..266593
FT                   /note="HMMPfam hit to PF01769, DE Divalent cation
FT                   transporter, score 7.2e-07"
FT   CDS             266717..267265
FT                   /transl_table=11
FT                   /locus_tag="BB4181"
FT                   /product="putative lipoprotein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3006"
FT                   /db_xref="GOA:Q7WFT9"
FT                   /db_xref="InterPro:IPR009746"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT9"
FT                   /protein_id="CAE34545.1"
FT                   /translation="MTQYFRALAFFLLLVPATAMACDGWPSWARGACQRVDQIWNEGGN
FT                   DLYLTGYSWHNRAMYSSDKIRSFNELAWGGGLGKSIYDEDGDWQGLYAMAFLDSHSDIE
FT                   PIAGYGFQKIGRIGADTRLGIGYTVFLTSRSDIMSRVPFPGILPLVSAGYRDATLYATY
FT                   IPGGKGNGNVLFMFGRWEF"
FT   misc_feature    266717..266779
FT                   /note="Signal peptide predicted for BB4181 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 0.999 between residues 21 and 22"
FT   misc_feature    266735..266803
FT                   /note="1 probable transmembrane helix predicted for BB4181
FT                   by TMHMM2.0 at aa 7-29"
FT   misc_feature    266750..266782
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(267262..267870)
FT                   /transl_table=11
FT                   /locus_tag="BB4182"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3007"
FT                   /db_xref="InterPro:IPR006840"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT8"
FT                   /protein_id="CAE34546.1"
FT                   /translation="MSLRESAAAADAGAGPLAGSARDLLAQWNGGEDVWVFAYGSLIWR
FT                   PDFAWQERRLARVRGYHRSLCLWSHDHRGSPDNPGLVFGLDRGGCCRGVAFRVAGRDVP
FT                   EVFQALWHREMSGGAYKPRWLRCHTGQAPVRGLAFVPDRRCRHYAGALSDELLIRAVRQ
FT                   AVGRSGACLDYVRETHRALNEHGIVDCRLGALVDRLAQP"
FT   CDS             complement(268053..268523)
FT                   /transl_table=11
FT                   /gene="grp"
FT                   /locus_tag="BB4183"
FT                   /product="glutamate uptake regulatory protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3008"
FT                   /db_xref="GOA:Q7WFT7"
FT                   /db_xref="InterPro:IPR019888"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT7"
FT                   /protein_id="CAE34547.1"
FT                   /translation="MGVPVDQTDIKILRLLQKDATCSVAEIAEQVNLSVTPCWRRIQKL
FT                   KDDGVIARNAVLLDPKALGLNLTVFVSIKTNQHNAKWTDNLINAVMSLPNVVEFYRMAG
FT                   DIDYLLKVVVEDMAAYDRFYRRLIEAVDLLDVSASFSMEVIKSTTELPLDAV"
FT   misc_feature    complement(268128..268439)
FT                   /note="HMMPfam hit to PF01037, DE AsnC family, score
FT                   2.1e-42"
FT   misc_feature    complement(268377..268457)
FT                   /note="PS00519 Bacterial regulatory proteins, asnC family
FT                   signature."
FT   CDS             complement(268530..269789)
FT                   /transl_table=11
FT                   /locus_tag="BB4184"
FT                   /product="putative D-amino acid dehydrogenase small
FT                   subunit"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3009"
FT                   /db_xref="GOA:Q7WFT6"
FT                   /db_xref="InterPro:IPR006076"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT6"
FT                   /protein_id="CAE34548.1"
FT                   /translation="MMRVLVLGAGVAGMTAAYYLWRDGHAVTVVERQAGPARETSFGNA
FT                   GGLCPSFAGPWAAPGMVAKVLRMALQRNAPIRFSLAPRPRKLAWLARWLGECSAERFRV
FT                   NKLRMQRVAHYSQACLREIAAAGLPISFDFHQDGTLQLFRGEADLKAVPNITRALDEFE
FT                   VPWQFLSGAEAAAREPALAGAGAPVAGGLFLPLDGSGDCYKFVCGMGAWLAGQGVAFRY
FT                   GCTVASLAQAGGAIAGVHTDQGLLQADAYVIALGGSTPFLLRPLGLKLPIYPVKGYSIT
FT                   APIADEARAPRTAIMDEYNKVMISRLGPRLRAAGMAELKGYGLAIDPGRVAFLKRVVRE
FT                   WFPQGADYDAAQAWAGLRPMTPDGPAILGPTRYANLYLNCGHGSNGWTQACGTGRIVAD
FT                   IVAGRTPQIDLDGLTADRYT"
FT   CDS             complement(269874..270653)
FT                   /transl_table=11
FT                   /locus_tag="BB4185"
FT                   /product="putative oxidoreductase"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3010"
FT                   /db_xref="GOA:Q7WFT5"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT5"
FT                   /protein_id="CAE34549.1"
FT                   /translation="MDLGIAGRTALVFGGSRGMGRACARQLALEGVKVTLAARTAQTLE
FT                   QAAAQITREAGIGVGWVAADLTRAEGREAALAACPAPDILINNADGPLPGDFRDWSRDD
FT                   WISALDAMMLGPIDMIRRVVDGMTQRGFGRIVNIVSRSVKAPHAELGLSNGARSGLIGF
FT                   VAGLARQTVRHNVTINNLLPGAFATDAQVRHIQGLVEQSGQPFEKLWEERGRANPAGRY
FT                   GQPEELGALCAYICSMHTGYMTGQNILIDGGGYPGTY"
FT   misc_feature    complement(269892..270638)
FT                   /note="HMMPfam hit to PF00106, DE short chain
FT                   dehydrogenase, score 1.2e-36"
FT   CDS             270768..271322
FT                   /transl_table=11
FT                   /locus_tag="BB4186"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3011"
FT                   /db_xref="GOA:Q7WFT4"
FT                   /db_xref="InterPro:IPR010300"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT4"
FT                   /protein_id="CAE34550.1"
FT                   /translation="MRTPPLVSVPISPSLQNLCASVQSAQLNAAQALLRELAASVAGAN
FT                   GALADLPPELRAGHPDHYSRHVAYADPHGSFTIAYLIWRPGQFSPVHGHKTWCTYRVLQ
FT                   GELTESHYRWDPELGLALRTGAVARRPGDIVTATPGLAQIHRLGNAGDEVAISLHIYGV
FT                   AQSDIATGVNHVVQEAAPRPH"
FT   misc_feature    270768..270854
FT                   /note="Signal peptide predicted for BB4186 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.694) with cleavage site
FT                   probability 0.360 between residues 29 and 30"
FT   CDS             complement(271332..272315)
FT                   /transl_table=11
FT                   /locus_tag="BB4187"
FT                   /product="putative membrane protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3012"
FT                   /db_xref="GOA:Q7WFT3"
FT                   /db_xref="InterPro:IPR005064"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT3"
FT                   /protein_id="CAE34551.1"
FT                   /translation="MKPRILKGFAASLCALALLGAACAPAHADERPLVLVVPYPPGGST
FT                   DILARIMQPRLSKELGGRAVVVENKVGAASQIATAYVARAEPDGNTLLVSFDNHAINPA
FT                   VKPKLPYDTFKDFVAISQTVRFPLVVGANPSVPGKTLAEFLDAARKRPANTFNYASTGV
FT                   GSLNHLAPEELKRRAKVELLHVPYGGAGPAVQAVVGGQANMTWLSYAALRGQIQAGKIK
FT                   PLAVAGDKRLSDLPEVPTVIESGFPGFVAYSWSGMFAPAGTPADTVRKLTAAFQTVLAD
FT                   PEVSRKLNEAGFEIVASDGPALEQYVRSEYERWDSFIKANNISLEN"
FT   misc_feature    complement(271347..272174)
FT                   /note="HMMPfam hit to PF03401, DE Uncharacterized protein
FT                   family, UPF0065, score 7.3e-85"
FT   misc_feature    complement(272232..272315)
FT                   /note="Signal peptide predicted for BB4187 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 1.000) with cleavage site
FT                   probability 1.000 between residues 28 and 29"
FT   misc_feature    complement(272247..272279)
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT   CDS             complement(272495..273214)
FT                   /transl_table=11
FT                   /locus_tag="BB4188"
FT                   /product="hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3013"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT2"
FT                   /protein_id="CAE34552.1"
FT                   /translation="MLHAVGRTEFDHAVVMVRDRLDALAPHFERQGFHLSEKAVHNLGS
FT                   CNRLIVLEGTYVELLGWPPGAPPARKEIADSPLGLEALVFRTYDAEATYRRLLEAGFAV
FT                   NPVQELTRAAQWQGREVQARFHTVRFAEQPIPGIRMYFCRHLTPELVWNDELLSHPNGA
FT                   RGIVSIEADAADAQAVAQRLAAVVDVPAEAVAGGWDVPLGNLRLRVRQDPACATPRLRT
FT                   LTLENRDGAHYTLDTGV"
FT   CDS             complement(273231..275966)
FT                   /transl_table=11
FT                   /gene="secA"
FT                   /gene_synonym="prlD"
FT                   /gene_synonym="azi"
FT                   /gene_synonym="pea"
FT                   /locus_tag="BB4189"
FT                   /product="preprotein translocase secA subunit"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3014"
FT                   /db_xref="GOA:Q7WFT1"
FT                   /db_xref="InterPro:IPR011116"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFT1"
FT                   /protein_id="CAE34553.1"
FT                   /translation="MVSLLKKLIGSRNDRLLKEYRKQVAQINSLEPKISALSDEELSAK
FT                   TQEFRDRHQQGTSLDDLLPEAFAVVREAGKRVFGMRHFDVQMLGGIALHNGKIAEMRTG
FT                   EGKTLMATLPVYLNAIAGKGVHVVTVNDYLARRDAEWMGRLYRFLGMSTGVVVPQQPND
FT                   EKIAAYAADITYGTNNEFGFDYLRDNMEYRVEDRRQRRLFYAIVDEVDSILIDEARTPL
FT                   IISGQAEDHTELYVRMNAVPPLLKRMASEPKPHEPEPEGDYWVDEKSQQVYMSEAGHES
FT                   AEKILTRVGLLPEGESLYDPRHIALMHHMMVALRAHTLFFRDQQYVVQDDEVVIVDEFT
FT                   GRLMVGRRWSDGLHQAVEAKEGVKIQHENQTLASITFQNYFRMYDKLSGMTGTADTEAY
FT                   EFQEIYTLETVIIPTNKPMVRKDQNDQVFKTTQEKYQAILNDIRDCHERGQPVLVGTTS
FT                   IENSELLAGLLRQAKLPHEVLNAKQHAREAEIVAEAGKPGHITIATNMAGRGTDIVLGG
FT                   SVDKQVDLIHANEALSEAEKEARIETLRAEWKPLNERVKQAGGLRIIGTERHESRRIDN
FT                   QLRGRAGRQGDPGSSRFYLSLEDPLMRIFAGDRVRAIMERLKLPEGEPIEAGMVTRSIE
FT                   TAQRKVEGRNFDIRKQLLEYDDVANDQRKVLYSQRNEVLEAASIGATVEGLRDAAVAEM
FT                   FRGFIPEESVEEQWDVAGLEKALAGDWHIQLPLTDMLEQEPNLTDEELLERVVAAARQI
FT                   YTAKVEQVGAESWAQFERSIMLQSIDTHWREHLSALDYLRQGIHLRGYAQKNPKQEYKR
FT                   EAFELFSGMLDRIRDDVVRVLMTVRVQSAEQVEQAEADAAQPHVQNVQYHHSDYDEALA
FT                   DDGQPQGAQPVRNVLPKVGRNEPCPCGSGKKYKHCHGQLA"
FT   misc_feature    complement(273237..273296)
FT                   /note="This hit extended beyond the end of the feature by 1
FT                   aa and was clipped."
FT                   /note="HMMPfam hit to PF02810, DE SEC-C motif, score
FT                   1.4e-09"
FT   misc_feature    complement(274422..274469)
FT                   /note="PS01312 Protein secA signatures."
FT   misc_feature    complement(274653..275954)
FT                   /note="HMMPfam hit to PF01043, DE SecA protein, amino
FT                   terminal region, score 2.1e-300"
FT   CDS             complement(276146..277132)
FT                   /transl_table=11
FT                   /locus_tag="BB4190"
FT                   /product="putative peptidase family M23/M37 protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3015"
FT                   /db_xref="GOA:Q7WFT0"
FT                   /db_xref="InterPro:IPR002886"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFT0"
FT                   /protein_id="CAE34554.1"
FT                   /translation="MHAQPGREGHFTLGGGRLALLVGATLLTAAIVGAAVQRYMSPSAP
FT                   AAYAVDWPAYAQAVSPDRDTAFVRENVTMLATKVGTLQAKLASIDGLGRRVAQVAGVAY
FT                   TDPELATQLQGMPEEATHVMDDLFTDRQPPSPATAADLAQQLDEIQVRMAQQADNLRLL
FT                   DAALTRRSADKALLPSAMPITEYPYLSSSYGWRRNPVTGRYAMHEGLDFSAPSGTPILA
FT                   ASGGVVLVAKYQSGYGNSVEIDHGNGLITRYAHASRLLVKPGDVVERGQEIARVGSSGR
FT                   STGPHLHFEVRLAGQPLDPRLFLGPQQTAPPTVAQAPATAPAASATR"
FT   misc_feature    complement(276224..276472)
FT                   /note="HMMPfam hit to PF01551, DE Peptidase family M23/M37,
FT                   score 3.6e-36"
FT   misc_feature    complement(277028..277096)
FT                   /note="1 probable transmembrane helix predicted for BB4190
FT                   by TMHMM2.0 at aa 13-35"
FT   CDS             277174..277668
FT                   /transl_table=11
FT                   /locus_tag="BB4191"
FT                   /product="conserved hypothetical protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3016"
FT                   /db_xref="InterPro:IPR007922"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFS9"
FT                   /protein_id="CAE34555.1"
FT                   /translation="MASRNTYRPPRSSTNRPGDRSALGWLGHDMRGAGVLATARKHLQI
FT                   QHAVAAVLPPALGALCVVAKLENQHLQLAVPGPAHAAKLRQMAPRIAQTLTGQGWNVNE
FT                   ISVRVQAGMPRPGQKAPRPPKLAQPLGSTALDAFETLHRGLRPGPLADAVARLLKHHKN
FT                   R"
FT   CDS             complement(277780..278703)
FT                   /transl_table=11
FT                   /gene="lpxC"
FT                   /gene_synonym="envA"
FT                   /gene_synonym="asmB"
FT                   /locus_tag="BB4192"
FT                   /product="UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine
FT                   deacetylase"
FT                   /EC_number="3.5.1.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3017"
FT                   /db_xref="GOA:Q7WFS8"
FT                   /db_xref="InterPro:IPR015870"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFS8"
FT                   /protein_id="CAE34556.1"
FT                   /translation="MFRQRSIQNLVRTIGVGVHSGRRVELTLRPAEANTGIVFHRVDLP
FT                   QVVDLPASAIGVGDTRMASVLQQGNVRVSTVEHLMSALAGLGIDNLHVDLTAEEVPIMD
FT                   GSAATFVYLLRSAGIVEQNAPKRFIRVLKPIEVREGEGRNEKWARLEPHEGFALAFSID
FT                   FRHPAIDSTANFAEIDFATHSYVREIARARTFGFVNEVEALRSMGLARGGSLDNAIVMD
FT                   EFRVLNSDGLRYDDEFVKHKILDAIGDLYLLGKPLVARYVAYKSGHALNNQLARALLEQ
FT                   QDAWELVTYESQAEAPQAFRHEWKLA"
FT   misc_feature    complement(277855..278703)
FT                   /note="HMMPfam hit to PF03331, DE UDP-3-O-acyl
FT                   N-acetylglycosamine deacetylase, score 5.4e-137"
FT   CDS             complement(278932..280116)
FT                   /transl_table=11
FT                   /gene="ftsZ"
FT                   /gene_synonym="sfiB"
FT                   /gene_synonym="sulB"
FT                   /locus_tag="BB4193"
FT                   /product="cell division protein FtsZ"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3018"
FT                   /db_xref="GOA:Q7WFS7"
FT                   /db_xref="HSSP:1FSZ"
FT                   /db_xref="InterPro:IPR018316"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFS7"
FT                   /protein_id="CAE34557.1"
FT                   /translation="MMNFEMLENNAKGTVIKVVGVGGAGGNAVAHMIRSGVSGVDFICA
FT                   NTDAQALAATNAPVQIRLGRTGLGAGAKPEQGRASAETAREEIRAALNGAHMVFITAGM
FT                   GGGTGTGAGPVVAEVAKELGILTVGVVTKPFTFEGNKRLRMAEDGIGELGKHVHSLIVV
FT                   LNENLYELMDDDATQEDCFKAADDILHNACAGIAEIINVEGNVNVDFEDVKTIMGEQGQ
FT                   AMMGTAAASGADRARVAAEKAIACPLLEGVDLNGARGVLVNITASRTLKMRETREIMET
FT                   IRSYASDDATVIFGTAYDEQMGEELRVTVVATGLGREAVRPQLVQHTSEALRTGTDNMP
FT                   VGNMLAGQQGDYRGLDMPSVMRNPRSQASAQVRALESSGMDHFDIPAFLRKQAD"
FT   misc_feature    complement(279118..279501)
FT                   /note="HMMPfam hit to PF03953, DE Tubulin/FtsZ family,
FT                   C-terminal domain, score 5.8e-29"
FT   misc_feature    complement(279505..280077)
FT                   /note="HMMPfam hit to PF00091, DE Tubulin/FtsZ family,
FT                   GTPase domain, score 7.7e-78"
FT   CDS             complement(280305..281531)
FT                   /transl_table=11
FT                   /gene="ftsA"
FT                   /gene_synonym="divA"
FT                   /locus_tag="BB4194"
FT                   /product="cell division protein FtsA"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3019"
FT                   /db_xref="GOA:Q7WFS6"
FT                   /db_xref="HSSP:1E4F"
FT                   /db_xref="InterPro:IPR003494"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFS6"
FT                   /protein_id="CAE34558.1"
FT                   /translation="MTRDIKDLIVALDIGTSKVVAVVAEILPEGRFEVLGLGQHESRGM
FT                   RKGVVVNIETTVNSIQRALEEAELMADCKIRDVYAGIAGSHIRSFNSSGMVAVKDKEVT
FT                   ATDVARVIETAKAVNIPTDQQVLHVLTQEFIVDGQEDIREPIGMSGLRLEVRVHIVTGA
FT                   VSAAQNIVKCVRRCGLEVQDLILQPLASSLACLTADEKELGVVLVDIGGGTTDVAIFTG
FT                   GAIRHTAVIPIAGDQITNDIAAMLRTPTPDAEEIKLRYGVAKQVLARPDEAVEVPGLGD
FT                   RGPRQVKRQALGAVIEPRVEELFTLIQQVVRDSGYEDLLASGVVLTGGSAQMPGMIELA
FT                   EDVFLKPVRVAVPEYEGSLADVMRNPRFSTVMGLLQEARMQRLRGRKVAAQTGNFKTLL
FT                   ARMKEWFMN"
FT   misc_feature    complement(280407..280940)
FT                   /note="HMMPfam hit to PF02491, DE Cell division protein
FT                   FtsA, score 2.7e-52"
FT   misc_feature    complement(280944..281507)
FT                   /note="HMMPfam hit to PF02491, DE Cell division protein
FT                   FtsA, score 4.1e-59"
FT   CDS             complement(281536..282357)
FT                   /transl_table=11
FT                   /gene="ftsQ"
FT                   /locus_tag="BB4195"
FT                   /product="putative cell division protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3020"
FT                   /db_xref="GOA:Q7WFS5"
FT                   /db_xref="InterPro:IPR005548"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFS5"
FT                   /protein_id="CAE34559.1"
FT                   /translation="MWNDARTINLIANTLAVLAVAAMLLAGVAWVAQRPYFTLAAIEIE
FT                   SMPETEMHYVSTGAVRAAIAGRFGGNFFTVDLDEAREAFESVPWVRHATVRRIWPNTLR
FT                   VRVEEQQPLALWNENQMINTWGEAFTANTGELADDMVLPHFTGPEGTESLVVQRYAELA
FT                   RWFAPLDMHVRELVLNPRYAWAVTLSNGMKLDLGRDPGADAPDPHGLPGALPFAARIQR
FT                   FVQAWPVVSSRLEGRTVTQADLRYPTGFALALAPLPPEHASHSKSKPAKKR"
FT   misc_feature    complement(281623..282333)
FT                   /note="HMMPfam hit to PF03799, DE Cell division protein
FT                   FtsQ, score 3.8e-17"
FT   misc_feature    complement(282265..282357)
FT                   /note="Signal peptide predicted for BB4195 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.999) with cleavage site
FT                   probability 0.975 between residues 31 and 32"
FT   CDS             complement(282370..283320)
FT                   /transl_table=11
FT                   /gene="ddlB"
FT                   /gene_synonym="ddl"
FT                   /locus_tag="BB4196"
FT                   /product="D-alanine--D-alanine ligase B"
FT                   /EC_number="6.3.2.4"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3021"
FT                   /db_xref="GOA:Q7WFS4"
FT                   /db_xref="InterPro:IPR013817"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFS4"
FT                   /protein_id="CAE34560.1"
FT                   /translation="MSKQFGKVGVLYGGRSAEREVSLMSGKGVHEALLSAGVDAHLFDT
FT                   GERSLADLAAAGFERVFIALHGRYGEDGTLQGALELLGIPYTGSGPLASSLSMDKIMTK
FT                   RVWLQHGLPTPAFEVLGGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAY
FT                   ELAARFDAEVLAEQFITGRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQ
FT                   YFCPADLPADVAADVAAVAERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHS
FT                   LVPMAARAVGMSYADLCVAILAEAACKVRSPARQD"
FT   misc_feature    complement(282412..283305)
FT                   /note="HMMPfam hit to PF01820, DE D-ala D-ala ligase, score
FT                   2.9e-113"
FT   misc_feature    complement(283090..283125)
FT                   /note="PS00843 D-alanine--D-alanine ligase signature 1."
FT   CDS             complement(283317..284723)
FT                   /transl_table=11
FT                   /gene="murC"
FT                   /locus_tag="BB4197"
FT                   /product="UDP-N-acetylmuramate--alanine ligase"
FT                   /EC_number="6.3.2.8"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3022"
FT                   /db_xref="GOA:Q7WFS3"
FT                   /db_xref="InterPro:IPR005758"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFS3"
FT                   /protein_id="CAE34561.1"
FT                   /translation="MKHRIQHIHFVGVGGSGMSGIAEVLLNLGYTISGSDLNESAVTRR
FT                   LAELGMRIAIGHDRANVAGAGAIVTSTAVAGDNPEVLAARAARIPVVPRAVMLAELMRL
FT                   KRGIAVAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLTSAGANARLGQGEYIVVEADE
FT                   SDASFLNLLPVMAIVTNIDADHMDTYGHDVARLKSAFIEFTQRLPFYGSAILCADDANV
FT                   REIMPFVSRPITTYGLSPDAQVCAQDVQADGTRMRFTVQRRDRDVVLPALQVELNLPGL
FT                   HNVRNALAAIAVATELGVDDAAIREALAAFKGVGRRFTQWGDLPVPAAHGGGTFTLVDD
FT                   YGHHPVEMAATLAAARGAWPQRRIVLAFQPHRYTRTRDCFEDFVRVLGSADGVLLTEVY
FT                   AAGEAPLVAADGRALSRALRVAGKVEPVFVEDVGELPQAILDFVRDGDVVVVMGAGSIS
FT                   KTPALVGELA"
FT   misc_feature    complement(283491..283784)
FT                   /note="HMMPfam hit to PF02875, DE Mur ligase family,
FT                   glutamate ligase domain, score 3e-20"
FT   misc_feature    complement(283806..284600)
FT                   /note="HMMPfam hit to PF01225, DE Mur ligase family,
FT                   catalytic domain, score 1.6e-63"
FT   CDS             complement(284720..285793)
FT                   /transl_table=11
FT                   /gene="murG"
FT                   /locus_tag="BB4198"
FT                   /product="UDP-N-acetylglucosamine--N-acetylmuramyl-"
FT                   /EC_number="2.4.1.-"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3023"
FT                   /db_xref="GOA:Q7WFS2"
FT                   /db_xref="InterPro:IPR007235"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFS2"
FT                   /protein_id="CAE34562.1"
FT                   /translation="MSAPTILIMAGGTGGHIMPGLAVAEVLRERGWRVLWLGNPDKMEG
FT                   RLVPPRGIELVPLRFQGVRGRGAAALLKLPFLLARACAQAWRRLADIRPDVVLGMGGYV
FT                   AFPGGVMAALRRTPLVVHEQNAVAGTANRWLARLARRVLSGFPGVLPRGEALGNPVRAD
FT                   LCALPEPAERYAGRSGALRVLVVGGSLGAHALNTTVPQALALLPEQARPQVVHQAGEQH
FT                   LPALQQAYAQAGVQADCRAFIDDMAGAMAQADLLICRAGAMTVSEVAAAGVAALFVPFP
FT                   HAIDDHQTANARFLSDAQAAWLQPQASLTPQWLAQWLGQRTRQELQAVAGRARTHALPR
FT                   AAAHIADVCEQAARRAS"
FT   misc_feature    complement(284969..285778)
FT                   /note="HMMPfam hit to PF03033, DE Glycosyltransferase
FT                   family 28 N-terminal domain, score 2.2e-92"
FT   misc_feature    complement(285722..285793)
FT                   /note="Signal peptide predicted for BB4198 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.819) with cleavage site
FT                   probability 0.760 between residues 24 and 25"
FT   CDS             complement(285790..286983)
FT                   /transl_table=11
FT                   /gene="ftsW"
FT                   /locus_tag="BB4199"
FT                   /product="cell division protein FtsW"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3024"
FT                   /db_xref="GOA:Q7WFS1"
FT                   /db_xref="InterPro:IPR013437"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFS1"
FT                   /protein_id="CAE34563.1"
FT                   /translation="MSLFAELTASVNAVRPGRTRMRNYDMPLIVAASTLLLLGLLMVYS
FT                   ASIALADGPRYASYGRYYFVIRHGLFLTAGLLAAAVVLSVPIRVWQRLAVPLFMFALIL
FT                   LVAVLIPGIGREVNGAHRWIPLGPLNFQPSELMKLAALLYAADYTVRKQEHMQAFSRGF
FT                   LPMACALGGVGMLLLLEPDLGAFMVIVAIAIGILFLGGINGKYFSSLLAVLVGTFLMLI
FT                   WVSPWRRARLFAYLDPWNEANAYGSAYQLSHSLIALGRGEWFGVGLGASVEKLHYLPEA
FT                   HTDFLMAVVGEELGFAGVMLVITLFAIIVYRGFDIGRQAIAMERTFAGLVAHGVAMWVG
FT                   VQAFINMGVCLGLLPTKGLTLPLMSYGGSGIVMNLCALAMLIRVDVENRVMMRGGRV"
FT   misc_feature    complement(285814..286908)
FT                   /note="HMMPfam hit to PF01098, DE Cell cycle protein, score
FT                   4e-112"
FT   misc_feature    complement(join(285838..285906,285949..286005,
FT                   286042..286101,286303..286359,286378..286437,
FT                   286447..286515,286549..286617,286645..286704,
FT                   286723..286791,286834..286902))
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB4199 by TMHMM2.0 at aa 28-50, 65-87, 94-113, 123-145,
FT                   157-179, 183-202, 209-227, 295-314, 327-345 and 360-382"
FT   misc_feature    complement(286831..286983)
FT                   /note="Signal peptide predicted for BB4199 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.963) with cleavage site
FT                   probability 0.945 between residues 51 and 52"
FT   CDS             complement(286980..288512)
FT                   /transl_table=11
FT                   /gene="murD"
FT                   /locus_tag="BB4200"
FT                   /product="putative peptidoglycan synthesis protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3025"
FT                   /db_xref="GOA:Q7WFS0"
FT                   /db_xref="HSSP:1E0D"
FT                   /db_xref="InterPro:IPR005762"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFS0"
FT                   /protein_id="CAE34564.1"
FT                   /translation="MNTTETSRAAAPLVLILGLGETGVAAARWCARQGSPLRVADTRAQ
FT                   PGGLAALQAALADATVEYRLGCGEQFPPDLLDGVAQIVLSPGLVPHESPTRELLEQARE
FT                   RNVEVVGEIELFARALAGLAESREYRPRVLAITGTNGKTTVTALTRQLIEAGGMSARAA
FT                   GNISPAALAALIDALDQDDLPQVWVLELSSFQLETTRTLAPDAAVVLNVTQDHLDWHGD
FT                   MQAYAQAKARILKPARLAIVNRDDPLTVAMVESLQALNVRSFGRDVPALVGDMGLELGQ
FT                   GVAWLTACESNDFDEPAPAPRRKKDAPPPTRAGGRMSRLMPVDALRIRGVHNALNALAA
FT                   MQLARSLDLGWGPMLRTLRDYAGEPHRAELVRSIGDVDYINDSKGTNVGATVAALEGLG
FT                   QQVVLIAGGQGKGQDFSPLVPVVRRHARAVVLIGVDGAAIGKVLEPTGVPCVAAADMRE
FT                   AVRRAAELAQPGDAVLLSPACASFDMFRNYPHRGEVFAAEVQELALDRGEVA"
FT   misc_feature    complement(287181..287423)
FT                   /note="HMMPfam hit to PF02875, DE Mur ligase family,
FT                   glutamate ligase domain, score 1.4e-10"
FT   misc_feature    complement(287445..288353)
FT                   /note="HMMPfam hit to PF01225, DE Mur ligase family,
FT                   catalytic domain, score 2.6e-32"
FT   misc_feature    complement(288033..288056)
FT                   /note="PS00687 Aldehyde dehydrogenases glutamic acid active
FT                   site."
FT   misc_feature    complement(288042..288113)
FT                   /note="PS01011 Folylpolyglutamate synthase signature 1."
FT   misc_feature    complement(288432..288512)
FT                   /note="Signal peptide predicted for BB4200 by SignalP 2.0
FT                   HMM (Signal peptide probabilty 0.785) with cleavage site
FT                   probability 0.590 between residues 27 and 28"
FT   CDS             complement(288509..289642)
FT                   /transl_table=11
FT                   /gene="murX"
FT                   /gene_synonym="mraY"
FT                   /locus_tag="BB4201"
FT                   /product="phospho-N-acetylmuramoyl-pentapeptide-transfera
FT                   se"
FT                   /EC_number="2.7.8.13"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3026"
FT                   /db_xref="GOA:Q7WFR9"
FT                   /db_xref="InterPro:IPR018480"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q7WFR9"
FT                   /protein_id="CAE34565.1"
FT                   /translation="MRAIGVFEYITLRAVLACATALLIGLVAGPRVIRRLTEMKIGQAV
FT                   RAYGPESHLVKTGTPTMGGALILIAIAISTLLWADWTNRFVWVVLLVTFGFGWIGWMDD
FT                   YRKVVYRDPEGMPARQKFFWQATIGLVAAVYLAFAVSAPANTELWPLFKAWVGSGFTMP
FT                   LPTRADLIVPFFKSVSYPLGVLGFVALTWAVIVGTSNAVNLTDGLDGLAIMPTVMVGSA
FT                   LGIFAYVVGRVDYSKYLLFPYIPGAAELMVLCAAIGGAGLAFLWFNAYPAQVFMGDVGA
FT                   LALGGALGTIAVIVRQEIVLFIMGGVFVVETLSVMVQVTWFKYTKRKYGQGRRIFRMAP
FT                   LHHHFEVGGWKETQVVVRFWIITMMLVLVGLSTLKLR"
FT   misc_feature    complement(join(288521..288580,288680..288748,
FT                   288761..288829,288857..288925,288944..289012,
FT                   289055..289123,289211..289279,289337..289390,
FT                   289409..289468,289541..289609))
FT                   /note="10 probable transmembrane helices predicted for
FT                   BB4201 by TMHMM2.0 at aa 12-34, 59-78, 85-102, 122-144,
FT                   174-196, 211-233, 240-262, 272-294, 299-321 and 355-374"
FT   misc_feature    complement(288740..289387)
FT                   /note="HMMPfam hit to PF00953, DE Glycosyl transferase,
FT                   score 4.1e-51"
FT   CDS             complement(289668..292505)
FT                   /transl_table=11
FT                   /gene="murE"
FT                   /locus_tag="BB4202"
FT                   /product="Possible murein precusor biosynthesis
FT                   bifunctional protein"
FT                   /note="ortholog of Bordetella pertussis (BX470248) BP3027"
FT                   /db_xref="GOA:Q7WFR8"
FT                   /db_xref="HSSP:1GG4"
FT                   /db_xref="InterPro:IPR018109"
FT                   /db_xref="UniProtKB/TrEMBL:Q7WFR8"
FT                   /protein_id="